Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8047O02.5
        

               Conread position:
               1-88
               

               Cow position:
               
               

               Alignm length:
               88
               

               Alignm identity:
               76
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               76-316
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               181
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               55, 10
               

               Conread position:
               79-463
               

               Cow position:
               
               

               Alignm length:
               401
               

               Alignm identity:
               277
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 84
               

               Conread position:
               79-607
               

               Cow position:
               
               

               Alignm length:
               544
               

               Alignm identity:
               394
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 327
               

               Conread position:
               84-607
               

               Cow position:
               
               

               Alignm length:
               534
               

               Alignm identity:
               390
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 5
               

               Conread position:
               84-607
               

               Cow position:
               
               

               Alignm length:
               536
               

               Alignm identity:
               397
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 8
               

               Conread position:
               88-607
               

               Cow position:
               
               

               Alignm length:
               534
               

               Alignm identity:
               405
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 76
               

               Conread position:
               91-264
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               91-514
               

               Cow position:
               
               

               Alignm length:
               438
               

               Alignm identity:
               323
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 305
               

               Conread position:
               91-526
               

               Cow position:
               
               

               Alignm length:
               445
               

               Alignm identity:
               324
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 12
               

               Conread position:
               91-605
               

               Cow position:
               
               

               Alignm length:
               517
               

               Alignm identity:
               334
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               69, 28
               

               Conread position:
               91-607
               

               Cow position:
               
               

               Alignm length:
               536
               

               Alignm identity:
               402
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 322
               

               Conread position:
               92-427
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 99
               

               Conread position:
               92-607
               

               Cow position:
               
               

               Alignm length:
               525
               

               Alignm identity:
               369
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 19
               

               Conread position:
               92-607
               

               Cow position:
               
               

               Alignm length:
               519
               

               Alignm identity:
               380
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 23
               

               Conread position:
               93-305
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               156
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               27, 99
               

               Conread position:
               93-534
               

               Cow position:
               
               

               Alignm length:
               450
               

               Alignm identity:
               313
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               197, 26
               

               Conread position:
               94-521
               

               Cow position:
               
               

               Alignm length:
               441
               

               Alignm identity:
               325
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 50
               

               Conread position:
               94-534
               

               Cow position:
               
               

               Alignm length:
               447
               

               Alignm identity:
               333
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 88
               

               Conread position:
               94-573
               

               Cow position:
               
               

               Alignm length:
               492
               

               Alignm identity:
               339
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 100
               

               Conread position:
               94-601
               

               Cow position:
               
               

               Alignm length:
               509
               

               Alignm identity:
               361
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               364, 65
               

               Conread position:
               94-607
               

               Cow position:
               
               

               Alignm length:
               525
               

               Alignm identity:
               379
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 307
               

               Conread position:
               94-607
               

               Cow position:
               
               

               Alignm length:
               526
               

               Alignm identity:
               388
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 82
               

               Conread position:
               95-585
               

               Cow position:
               
               

               Alignm length:
               504
               

               Alignm identity:
               366
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 179
               

               Conread position:
               95-601
               

               Cow position:
               
               

               Alignm length:
               518
               

               Alignm identity:
               371
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 91
               

               Conread position:
               95-605
               

               Cow position:
               
               

               Alignm length:
               525
               

               Alignm identity:
               365
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 249
               

               Conread position:
               95-605
               

               Cow position:
               
               

               Alignm length:
               517
               

               Alignm identity:
               382
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 76
               

               Conread position:
               95-607
               

               Cow position:
               
               

               Alignm length:
               524
               

               Alignm identity:
               380
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 9
               

               Conread position:
               95-607
               

               Cow position:
               
               

               Alignm length:
               524
               

               Alignm identity:
               379
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 306
               

               Conread position:
               95-607
               

               Cow position:
               
               

               Alignm length:
               525
               

               Alignm identity:
               392
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 223
               

               Conread position:
               95-607
               

               Cow position:
               
               

               Alignm length:
               525
               

               Alignm identity:
               379
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 306
               

               Conread position:
               95-607
               

               Cow position:
               
               

               Alignm length:
               518
               

               Alignm identity:
               374
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 66
               

               Conread position:
               95-607
               

               Cow position:
               
               

               Alignm length:
               523
               

               Alignm identity:
               384
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 28
               

               Conread position:
               95-608
               

               Cow position:
               
               

               Alignm length:
               521
               

               Alignm identity:
               356
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 68
               

               Conread position:
               96-557
               

               Cow position:
               
               

               Alignm length:
               478
               

               Alignm identity:
               342
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 303
               

               Conread position:
               96-571
               

               Cow position:
               
               

               Alignm length:
               492
               

               Alignm identity:
               360
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 99
               

               Conread position:
               96-607
               

               Cow position:
               
               

               Alignm length:
               523
               

               Alignm identity:
               364
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 36
               

               Conread position:
               97-309
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               154
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               18, 124
               

               Conread position:
               97-376
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               215
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 98
               

               Conread position:
               97-456
               

               Cow position:
               
               

               Alignm length:
               368
               

               Alignm identity:
               281
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 58
               

               Conread position:
               97-607
               

               Cow position:
               
               

               Alignm length:
               524
               

               Alignm identity:
               388
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 66
               

               Conread position:
               99-398
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               214
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               16, 40
               

               Conread position:
               99-599
               

               Cow position:
               
               

               Alignm length:
               510
               

               Alignm identity:
               368
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 102
               

               Conread position:
               99-601
               

               Cow position:
               
               

               Alignm length:
               506
               

               Alignm identity:
               330
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               35, 12
               

               Conread position:
               99-602
               

               Cow position:
               
               

               Alignm length:
               519
               

               Alignm identity:
               374
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 94
               

               Conread position:
               103-327
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               168
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               104-582
               

               Cow position:
               
               

               Alignm length:
               498
               

               Alignm identity:
               352
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 41
               

               Conread position:
               105-297
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               147
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               8, 82
               

               Conread position:
               105-602
               

               Cow position:
               
               

               Alignm length:
               510
               

               Alignm identity:
               367
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 79
               

               Conread position:
               108-551
               

               Cow position:
               
               

               Alignm length:
               471
               

               Alignm identity:
               338
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 10
               

               Conread position:
               111-607
               

               Cow position:
               
               

               Alignm length:
               509
               

               Alignm identity:
               365
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 80
               

               Conread position:
               130-551
               

               Cow position:
               
               

               Alignm length:
               437
               

               Alignm identity:
               305
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 192
               

               Conread position:
               134-444
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               236
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               160, 54
               

               Conread position:
               142-513
               

               Cow position:
               
               

               Alignm length:
               385
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 72
               

               Conread position:
               151-601
               

               Cow position:
               
               

               Alignm length:
               453
               

               Alignm identity:
               307
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               144, 177
               

               Conread position:
               159-425
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               206
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               178, 128
               

               Conread position:
               168-584
               

               Cow position:
               
               

               Alignm length:
               430
               

               Alignm identity:
               285
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               112, 88
               

               Conread position:
               184-607
               

               Cow position:
               
               

               Alignm length:
               432
               

               Alignm identity:
               323
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               107, 215
               

               Conread position:
               199-607
               

               Cow position:
               
               

               Alignm length:
               413
               

               Alignm identity:
               315
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 168
               

               Conread position:
               201-607
               

               Cow position:
               
               

               Alignm length:
               412
               

               Alignm identity:
               299
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               92, 170
               

               Conread position:
               238-477
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               171
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               57, 90
               

               Conread position:
               250-519
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               204
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               113, 148
               

               Conread position:
               307-607
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               233
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 93
               

               Conread position:
               322-607
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               215
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               137, 28
               

               Conread position:
               330-607
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               215
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 65
               

               Conread position:
               349-608
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               191
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               111, 36
               

               Conread position:
               358-607
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               191
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               101, 25
               

               Conread position:
               359-603
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               165
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               17, 95
               

               Conread position:
               366-607
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               183
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               95, 25
               

               Conread position:
               405-607
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               160
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               56, 185
               

               Conread position:
               456-596
               

               Cow position:
               
               

               Alignm length:
               141
               

               Alignm identity:
               111
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               459-607
               

               Cow position:
               
               

               Alignm length:
               151
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               96, 0
               

               Conread position:
               460-605
               

               Cow position:
               
               

               Alignm length:
               146
               

               Alignm identity:
               116
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               467-605
               

               Cow position:
               
               

               Alignm length:
               139
               

               Alignm identity:
               105
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               469-607
               

               Cow position:
               
               

               Alignm length:
               140
               

               Alignm identity:
               107
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               483-607
               

               Cow position:
               
               

               Alignm length:
               125
               

               Alignm identity:
               101
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               491-605
               

               Cow position:
               
               

               Alignm length:
               115
               

               Alignm identity:
               95
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               7, 0
               
Show alignments to all cow chromosomes.