Cow genome map
Conread name: | Ss1.1-Pig4-TMW8047O02.5 |
Conread position: | 1-88 |
Cow position: | chr20:6905993-6906080 (view UCSC Genome Browser custom track) |
Alignm length: | 88 |
Alignm identity: | 76 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 1-88 |
Cow position: | chr20:29757920-29758007 (view UCSC Genome Browser custom track) |
Alignm length: | 88 |
Alignm identity: | 76 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 1-88 |
Cow position: | chr20:30430632-30430545 (view UCSC Genome Browser custom track) |
Alignm length: | 88 |
Alignm identity: | 77 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 79-373 |
Cow position: | chr20:19192399-19192101 (view UCSC Genome Browser custom track) |
Alignm length: | 299 |
Alignm identity: | 207 |
Alignm E-value: | 3.00018e-42 |
Alignm gaps (pig, cow): | 52, 0 |
Conread position: | 79-607 |
Cow position: | chr20:5560986-5560448 (view UCSC Genome Browser custom track) |
Alignm length: | 540 |
Alignm identity: | 397 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 52, 323 |
Conread position: | 84-585 |
Cow position: | chr20:19437693-19438192 (view UCSC Genome Browser custom track) |
Alignm length: | 507 |
Alignm identity: | 361 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 53, 5 |
Conread position: | 84-607 |
Cow position: | chr20:822486-823034 (view UCSC Genome Browser custom track) |
Alignm length: | 552 |
Alignm identity: | 400 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 47, 5 |
Conread position: | 89-607 |
Cow position: | chr20:30684076-30684587 (view UCSC Genome Browser custom track) |
Alignm length: | 532 |
Alignm identity: | 372 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 22, 187 |
Conread position: | 91-281 |
Cow position: | chr20:3032677-3032868 (view UCSC Genome Browser custom track) |
Alignm length: | 201 |
Alignm identity: | 153 |
Alignm E-value: | 2e-26 |
Alignm gaps (pig, cow): | 20, 69 |
Conread position: | 91-408 |
Cow position: | chr20:10846339-10846010 (view UCSC Genome Browser custom track) |
Alignm length: | 331 |
Alignm identity: | 231 |
Alignm E-value: | 1.00053e-42 |
Alignm gaps (pig, cow): | 20, 308 |
Conread position: | 91-607 |
Cow position: | chr20:5483931-5484457 (view UCSC Genome Browser custom track) |
Alignm length: | 531 |
Alignm identity: | 411 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 27, 72 |
Conread position: | 91-607 |
Cow position: | chr20:15098128-15097610 (view UCSC Genome Browser custom track) |
Alignm length: | 530 |
Alignm identity: | 376 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 40, 13 |
Conread position: | 91-607 |
Cow position: | chr20:27868936-27869464 (view UCSC Genome Browser custom track) |
Alignm length: | 531 |
Alignm identity: | 390 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 20, 73 |
Conread position: | 92-334 |
Cow position: | chr20:24516608-24516852 (view UCSC Genome Browser custom track) |
Alignm length: | 248 |
Alignm identity: | 169 |
Alignm E-value: | 2e-26 |
Alignm gaps (pig, cow): | 27, 155 |
Conread position: | 92-439 |
Cow position: | chr20:10102805-10102461 (view UCSC Genome Browser custom track) |
Alignm length: | 355 |
Alignm identity: | 257 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 23, 71 |
Conread position: | 92-606 |
Cow position: | chr20:3270458-3270970 (view UCSC Genome Browser custom track) |
Alignm length: | 529 |
Alignm identity: | 383 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 10, 92 |
Conread position: | 93-389 |
Cow position: | chr20:28593483-28593787 (view UCSC Genome Browser custom track) |
Alignm length: | 309 |
Alignm identity: | 237 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 20, 70 |
Conread position: | 93-605 |
Cow position: | chr20:23798625-23799151 (view UCSC Genome Browser custom track) |
Alignm length: | 528 |
Alignm identity: | 378 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 38, 303 |
Conread position: | 94-348 |
Cow position: | chr20:8994072-8993817 (view UCSC Genome Browser custom track) |
Alignm length: | 259 |
Alignm identity: | 170 |
Alignm E-value: | 4e-23 |
Alignm gaps (pig, cow): | 41, 108 |
Conread position: | 94-448 |
Cow position: | chr20:22717943-22717587 (view UCSC Genome Browser custom track) |
Alignm length: | 366 |
Alignm identity: | 256 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 37, 60 |
Conread position: | 94-557 |
Cow position: | chr20:37579203-37579656 (view UCSC Genome Browser custom track) |
Alignm length: | 474 |
Alignm identity: | 309 |
Alignm E-value: | 1e-34 |
Alignm gaps (pig, cow): | 45, 17 |
Conread position: | 94-597 |
Cow position: | chr20:20755688-20755193 (view UCSC Genome Browser custom track) |
Alignm length: | 522 |
Alignm identity: | 339 |
Alignm E-value: | 4e-34 |
Alignm gaps (pig, cow): | 25, 270 |
Conread position: | 94-601 |
Cow position: | chr20:22206287-22206797 (view UCSC Genome Browser custom track) |
Alignm length: | 519 |
Alignm identity: | 355 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 40, 148 |
Conread position: | 94-602 |
Cow position: | chr20:3252388-3251873 (view UCSC Genome Browser custom track) |
Alignm length: | 519 |
Alignm identity: | 390 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 37, 21 |
Conread position: | 95-479 |
Cow position: | chr20:21393318-21393703 (view UCSC Genome Browser custom track) |
Alignm length: | 395 |
Alignm identity: | 279 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 97 |
Conread position: | 95-605 |
Cow position: | chr20:28160526-28161035 (view UCSC Genome Browser custom track) |
Alignm length: | 520 |
Alignm identity: | 373 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 36, 106 |
Conread position: | 95-607 |
Cow position: | chr20:5534687-5535204 (view UCSC Genome Browser custom track) |
Alignm length: | 523 |
Alignm identity: | 381 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 45, 95 |
Conread position: | 95-607 |
Cow position: | chr20:12439016-12438494 (view UCSC Genome Browser custom track) |
Alignm length: | 524 |
Alignm identity: | 380 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 306 |
Conread position: | 95-607 |
Cow position: | chr20:13762651-13763171 (view UCSC Genome Browser custom track) |
Alignm length: | 526 |
Alignm identity: | 385 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 36, 95 |
Conread position: | 95-607 |
Cow position: | chr20:21914071-21914594 (view UCSC Genome Browser custom track) |
Alignm length: | 527 |
Alignm identity: | 386 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 36, 67 |
Conread position: | 95-607 |
Cow position: | chr20:23469915-23469399 (view UCSC Genome Browser custom track) |
Alignm length: | 525 |
Alignm identity: | 375 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 302 |
Conread position: | 95-607 |
Cow position: | chr20:25851245-25850724 (view UCSC Genome Browser custom track) |
Alignm length: | 523 |
Alignm identity: | 380 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 45, 305 |
Conread position: | 95-607 |
Cow position: | chr20:28565855-28565329 (view UCSC Genome Browser custom track) |
Alignm length: | 528 |
Alignm identity: | 386 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 36, 310 |
Conread position: | 97-438 |
Cow position: | chr20:4799898-4799554 (view UCSC Genome Browser custom track) |
Alignm length: | 353 |
Alignm identity: | 263 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 34, 89 |
Conread position: | 97-602 |
Cow position: | chr20:24614297-24614797 (view UCSC Genome Browser custom track) |
Alignm length: | 513 |
Alignm identity: | 378 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 34, 95 |
Conread position: | 99-335 |
Cow position: | chr20:35119076-35119313 (view UCSC Genome Browser custom track) |
Alignm length: | 241 |
Alignm identity: | 169 |
Alignm E-value: | 1e-31 |
Alignm gaps (pig, cow): | 32, 12 |
Conread position: | 99-446 |
Cow position: | chr20:29572434-29572088 (view UCSC Genome Browser custom track) |
Alignm length: | 353 |
Alignm identity: | 251 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 39, 65 |
Conread position: | 101-607 |
Cow position: | chr20:13665440-13664948 (view UCSC Genome Browser custom track) |
Alignm length: | 515 |
Alignm identity: | 356 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 15, 56 |
Conread position: | 103-605 |
Cow position: | chr20:31379129-31378623 (view UCSC Genome Browser custom track) |
Alignm length: | 516 |
Alignm identity: | 358 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 28, 52 |
Conread position: | 104-607 |
Cow position: | chr20:7116717-7116202 (view UCSC Genome Browser custom track) |
Alignm length: | 517 |
Alignm identity: | 371 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 15, 299 |
Conread position: | 108-607 |
Cow position: | chr20:9954211-9953719 (view UCSC Genome Browser custom track) |
Alignm length: | 509 |
Alignm identity: | 388 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 23, 10 |
Conread position: | 111-607 |
Cow position: | chr20:8313672-8313173 (view UCSC Genome Browser custom track) |
Alignm length: | 506 |
Alignm identity: | 386 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 20, 79 |
Conread position: | 111-607 |
Cow position: | chr20:15064530-15065032 (view UCSC Genome Browser custom track) |
Alignm length: | 509 |
Alignm identity: | 372 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 26, 51 |
Conread position: | 111-622 |
Cow position: | chr20:18315819-18315329 (view UCSC Genome Browser custom track) |
Alignm length: | 526 |
Alignm identity: | 364 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 18, 82 |
Conread position: | 115-532 |
Cow position: | chr20:11679345-11678918 (view UCSC Genome Browser custom track) |
Alignm length: | 429 |
Alignm identity: | 311 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 16, 287 |
Conread position: | 115-592 |
Cow position: | chr20:20905418-20904959 (view UCSC Genome Browser custom track) |
Alignm length: | 481 |
Alignm identity: | 313 |
Alignm E-value: | 3.00004e-41 |
Alignm gaps (pig, cow): | 267, 27 |
Conread position: | 139-607 |
Cow position: | chr20:35119365-35119837 (view UCSC Genome Browser custom track) |
Alignm length: | 479 |
Alignm identity: | 339 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 151, 124 |
Conread position: | 140-449 |
Cow position: | chr20:35973620-35973299 (view UCSC Genome Browser custom track) |
Alignm length: | 327 |
Alignm identity: | 234 |
Alignm E-value: | 1.00053e-42 |
Alignm gaps (pig, cow): | 87, 40 |
Conread position: | 141-596 |
Cow position: | chr20:2791549-2791086 (view UCSC Genome Browser custom track) |
Alignm length: | 477 |
Alignm identity: | 303 |
Alignm E-value: | 7e-28 |
Alignm gaps (pig, cow): | 146, 63 |
Conread position: | 143-312 |
Cow position: | chr20:24390168-24390340 (view UCSC Genome Browser custom track) |
Alignm length: | 173 |
Alignm identity: | 131 |
Alignm E-value: | 9e-31 |
Alignm gaps (pig, cow): | 47, 0 |
Conread position: | 156-492 |
Cow position: | chr20:18328246-18327918 (view UCSC Genome Browser custom track) |
Alignm length: | 342 |
Alignm identity: | 226 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 179, 67 |
Conread position: | 165-502 |
Cow position: | chr20:24516853-24517193 (view UCSC Genome Browser custom track) |
Alignm length: | 344 |
Alignm identity: | 221 |
Alignm E-value: | 8e-30 |
Alignm gaps (pig, cow): | 128, 21 |
Conread position: | 168-607 |
Cow position: | chr20:29948338-29948766 (view UCSC Genome Browser custom track) |
Alignm length: | 441 |
Alignm identity: | 308 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 293, 107 |
Conread position: | 184-607 |
Cow position: | chr20:15291854-15292277 (view UCSC Genome Browser custom track) |
Alignm length: | 429 |
Alignm identity: | 319 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 107, 88 |
Conread position: | 189-599 |
Cow position: | chr20:8004384-8003967 (view UCSC Genome Browser custom track) |
Alignm length: | 420 |
Alignm identity: | 312 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 102, 210 |
Conread position: | 223-607 |
Cow position: | chr20:15947518-15947113 (view UCSC Genome Browser custom track) |
Alignm length: | 409 |
Alignm identity: | 304 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 70, 177 |
Conread position: | 224-589 |
Cow position: | chr20:28476194-28476547 (view UCSC Genome Browser custom track) |
Alignm length: | 368 |
Alignm identity: | 248 |
Alignm E-value: | 2e-39 |
Alignm gaps (pig, cow): | 234, 32 |
Conread position: | 233-596 |
Cow position: | chr20:28463371-28463729 (view UCSC Genome Browser custom track) |
Alignm length: | 371 |
Alignm identity: | 240 |
Alignm E-value: | 5e-25 |
Alignm gaps (pig, cow): | 34, 27 |
Conread position: | 236-607 |
Cow position: | chr20:25960991-25961370 (view UCSC Genome Browser custom track) |
Alignm length: | 383 |
Alignm identity: | 287 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 57, 80 |
Conread position: | 250-605 |
Cow position: | chr20:3032966-3033326 (view UCSC Genome Browser custom track) |
Alignm length: | 363 |
Alignm identity: | 278 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 119, 69 |
Conread position: | 255-607 |
Cow position: | chr20:13680150-13679791 (view UCSC Genome Browser custom track) |
Alignm length: | 361 |
Alignm identity: | 281 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 14, 138 |
Conread position: | 307-607 |
Cow position: | chr20:3684524-3684221 (view UCSC Genome Browser custom track) |
Alignm length: | 307 |
Alignm identity: | 236 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 58, 91 |
Conread position: | 362-601 |
Cow position: | chr20:8993622-8993385 (view UCSC Genome Browser custom track) |
Alignm length: | 241 |
Alignm identity: | 166 |
Alignm E-value: | 3e-30 |
Alignm gaps (pig, cow): | 96, 21 |
Conread position: | 364-531 |
Cow position: | chr20:13767413-13767580 (view UCSC Genome Browser custom track) |
Alignm length: | 171 |
Alignm identity: | 124 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 21, 111 |
Conread position: | 406-605 |
Cow position: | chr20:10856967-10856769 (view UCSC Genome Browser custom track) |
Alignm length: | 202 |
Alignm identity: | 139 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 191, 147 |
Conread position: | 447-605 |
Cow position: | chr20:10846011-10845857 (view UCSC Genome Browser custom track) |
Alignm length: | 159 |
Alignm identity: | 123 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 32, 0 |
Show alignments to all cow chromosomes.