Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8047O02.5
        

               Conread position:
               1-86
               

               Cow position:
               
               

               Alignm length:
               86
               

               Alignm identity:
               75
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-88
               

               Cow position:
               
               

               Alignm length:
               88
               

               Alignm identity:
               76
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-88
               

               Cow position:
               
               

               Alignm length:
               88
               

               Alignm identity:
               76
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-88
               

               Cow position:
               
               

               Alignm length:
               88
               

               Alignm identity:
               78
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-88
               

               Cow position:
               
               

               Alignm length:
               88
               

               Alignm identity:
               77
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-88
               

               Cow position:
               
               

               Alignm length:
               88
               

               Alignm identity:
               76
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-89
               

               Cow position:
               
               

               Alignm length:
               89
               

               Alignm identity:
               78
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               74-607
               

               Cow position:
               
               

               Alignm length:
               546
               

               Alignm identity:
               394
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 111
               

               Conread position:
               79-345
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               189
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               52, 111
               

               Conread position:
               79-423
               

               Cow position:
               
               

               Alignm length:
               357
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 106
               

               Conread position:
               79-557
               

               Cow position:
               
               

               Alignm length:
               482
               

               Alignm identity:
               349
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 237
               

               Conread position:
               79-607
               

               Cow position:
               
               

               Alignm length:
               540
               

               Alignm identity:
               392
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 238
               

               Conread position:
               84-607
               

               Cow position:
               
               

               Alignm length:
               533
               

               Alignm identity:
               397
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 8
               

               Conread position:
               87-594
               

               Cow position:
               
               

               Alignm length:
               515
               

               Alignm identity:
               323
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               51, 28
               

               Conread position:
               89-336
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               181
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               90-367
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               195
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               24, 95
               

               Conread position:
               91-424
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               230
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               49, 122
               

               Conread position:
               91-475
               

               Cow position:
               
               

               Alignm length:
               395
               

               Alignm identity:
               294
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 20
               

               Conread position:
               91-602
               

               Cow position:
               
               

               Alignm length:
               520
               

               Alignm identity:
               361
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               148, 8
               

               Conread position:
               91-605
               

               Cow position:
               
               

               Alignm length:
               523
               

               Alignm identity:
               345
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 74
               

               Conread position:
               91-605
               

               Cow position:
               
               

               Alignm length:
               525
               

               Alignm identity:
               347
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 20
               

               Conread position:
               91-607
               

               Cow position:
               
               

               Alignm length:
               549
               

               Alignm identity:
               395
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 190
               

               Conread position:
               91-607
               

               Cow position:
               
               

               Alignm length:
               530
               

               Alignm identity:
               379
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               6, 101
               

               Conread position:
               91-607
               

               Cow position:
               
               

               Alignm length:
               528
               

               Alignm identity:
               403
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 20
               

               Conread position:
               91-610
               

               Cow position:
               
               

               Alignm length:
               545
               

               Alignm identity:
               373
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 239
               

               Conread position:
               92-457
               

               Cow position:
               
               

               Alignm length:
               377
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 95
               

               Conread position:
               92-494
               

               Cow position:
               
               

               Alignm length:
               409
               

               Alignm identity:
               300
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 70
               

               Conread position:
               92-528
               

               Cow position:
               
               

               Alignm length:
               448
               

               Alignm identity:
               276
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               21, 12
               

               Conread position:
               92-607
               

               Cow position:
               
               

               Alignm length:
               527
               

               Alignm identity:
               379
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 31
               

               Conread position:
               92-607
               

               Cow position:
               
               

               Alignm length:
               528
               

               Alignm identity:
               378
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 309
               

               Conread position:
               92-607
               

               Cow position:
               
               

               Alignm length:
               528
               

               Alignm identity:
               381
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 311
               

               Conread position:
               93-584
               

               Cow position:
               
               

               Alignm length:
               495
               

               Alignm identity:
               347
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 22
               

               Conread position:
               93-607
               

               Cow position:
               
               

               Alignm length:
               524
               

               Alignm identity:
               390
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 18
               

               Conread position:
               94-363
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               168
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               37, 17
               

               Conread position:
               94-602
               

               Cow position:
               
               

               Alignm length:
               524
               

               Alignm identity:
               349
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 97
               

               Conread position:
               94-607
               

               Cow position:
               
               

               Alignm length:
               525
               

               Alignm identity:
               378
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 96
               

               Conread position:
               94-607
               

               Cow position:
               
               

               Alignm length:
               533
               

               Alignm identity:
               376
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 17
               

               Conread position:
               94-607
               

               Cow position:
               
               

               Alignm length:
               534
               

               Alignm identity:
               386
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 308
               

               Conread position:
               94-607
               

               Cow position:
               
               

               Alignm length:
               524
               

               Alignm identity:
               389
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 96
               

               Conread position:
               95-323
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               162
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               36, 67
               

               Conread position:
               95-399
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               212
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               36, 296
               

               Conread position:
               95-556
               

               Cow position:
               
               

               Alignm length:
               479
               

               Alignm identity:
               349
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 207
               

               Conread position:
               95-591
               

               Cow position:
               
               

               Alignm length:
               510
               

               Alignm identity:
               383
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 308
               

               Conread position:
               95-594
               

               Cow position:
               
               

               Alignm length:
               511
               

               Alignm identity:
               365
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 126
               

               Conread position:
               95-605
               

               Cow position:
               
               

               Alignm length:
               548
               

               Alignm identity:
               384
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 189
               

               Conread position:
               95-607
               

               Cow position:
               
               

               Alignm length:
               528
               

               Alignm identity:
               386
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 87
               

               Conread position:
               95-607
               

               Cow position:
               
               

               Alignm length:
               533
               

               Alignm identity:
               385
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 102
               

               Conread position:
               95-607
               

               Cow position:
               
               

               Alignm length:
               524
               

               Alignm identity:
               378
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 301
               

               Conread position:
               95-607
               

               Cow position:
               
               

               Alignm length:
               524
               

               Alignm identity:
               385
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 306
               

               Conread position:
               95-607
               

               Cow position:
               
               

               Alignm length:
               523
               

               Alignm identity:
               375
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 95
               

               Conread position:
               95-608
               

               Cow position:
               
               

               Alignm length:
               530
               

               Alignm identity:
               374
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 312
               

               Conread position:
               96-600
               

               Cow position:
               
               

               Alignm length:
               517
               

               Alignm identity:
               380
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 91
               

               Conread position:
               96-607
               

               Cow position:
               
               

               Alignm length:
               522
               

               Alignm identity:
               367
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 121
               

               Conread position:
               97-448
               

               Cow position:
               
               

               Alignm length:
               362
               

               Alignm identity:
               283
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 57
               

               Conread position:
               97-599
               

               Cow position:
               
               

               Alignm length:
               516
               

               Alignm identity:
               369
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 126
               

               Conread position:
               97-606
               

               Cow position:
               
               

               Alignm length:
               522
               

               Alignm identity:
               378
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 155
               

               Conread position:
               98-605
               

               Cow position:
               
               

               Alignm length:
               518
               

               Alignm identity:
               380
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 80
               

               Conread position:
               98-607
               

               Cow position:
               
               

               Alignm length:
               522
               

               Alignm identity:
               401
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 64
               

               Conread position:
               99-607
               

               Cow position:
               
               

               Alignm length:
               520
               

               Alignm identity:
               397
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 12
               

               Conread position:
               100-607
               

               Cow position:
               
               

               Alignm length:
               519
               

               Alignm identity:
               373
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 19
               

               Conread position:
               104-607
               

               Cow position:
               
               

               Alignm length:
               515
               

               Alignm identity:
               374
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 86
               

               Conread position:
               105-582
               

               Cow position:
               
               

               Alignm length:
               493
               

               Alignm identity:
               344
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 58
               

               Conread position:
               106-607
               

               Cow position:
               
               

               Alignm length:
               512
               

               Alignm identity:
               383
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               84, 15
               

               Conread position:
               111-486
               

               Cow position:
               
               

               Alignm length:
               387
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 290
               

               Conread position:
               111-602
               

               Cow position:
               
               

               Alignm length:
               498
               

               Alignm identity:
               364
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 78
               

               Conread position:
               111-606
               

               Cow position:
               
               

               Alignm length:
               508
               

               Alignm identity:
               372
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 49
               

               Conread position:
               111-607
               

               Cow position:
               
               

               Alignm length:
               508
               

               Alignm identity:
               376
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 290
               

               Conread position:
               111-616
               

               Cow position:
               
               

               Alignm length:
               528
               

               Alignm identity:
               338
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               22, 84
               

               Conread position:
               145-608
               

               Cow position:
               
               

               Alignm length:
               474
               

               Alignm identity:
               314
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               148, 45
               

               Conread position:
               159-607
               

               Cow position:
               
               

               Alignm length:
               457
               

               Alignm identity:
               368
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               134, 239
               

               Conread position:
               182-607
               

               Cow position:
               
               

               Alignm length:
               435
               

               Alignm identity:
               324
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               111, 217
               

               Conread position:
               185-595
               

               Cow position:
               
               

               Alignm length:
               421
               

               Alignm identity:
               283
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               102, 215
               

               Conread position:
               189-607
               

               Cow position:
               
               

               Alignm length:
               427
               

               Alignm identity:
               318
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               162, 202
               

               Conread position:
               198-605
               

               Cow position:
               
               

               Alignm length:
               420
               

               Alignm identity:
               270
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               8, 71
               

               Conread position:
               214-607
               

               Cow position:
               
               

               Alignm length:
               411
               

               Alignm identity:
               287
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               76, 281
               

               Conread position:
               223-601
               

               Cow position:
               
               

               Alignm length:
               381
               

               Alignm identity:
               249
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               134, 96
               

               Conread position:
               225-568
               

               Cow position:
               
               

               Alignm length:
               353
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 175
               

               Conread position:
               225-607
               

               Cow position:
               
               

               Alignm length:
               392
               

               Alignm identity:
               303
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 175
               

               Conread position:
               235-532
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               209
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               59, 91
               

               Conread position:
               279-564
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               200
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               120, 71
               

               Conread position:
               289-607
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               246
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               75, 108
               

               Conread position:
               330-607
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               198
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               131, 23
               

               Conread position:
               344-607
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               185
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               67, 39
               

               Conread position:
               353-596
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               188
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 25
               

               Conread position:
               360-607
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               196
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               98, 31
               

               Conread position:
               399-607
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               162
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               426-590
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               122
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               35, 112
               

               Conread position:
               459-608
               

               Cow position:
               
               

               Alignm length:
               150
               

               Alignm identity:
               119
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               479-607
               

               Cow position:
               
               

               Alignm length:
               129
               

               Alignm identity:
               108
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               87, 0
               

               Conread position:
               483-607
               

               Cow position:
               
               

               Alignm length:
               126
               

               Alignm identity:
               106
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               499-608
               

               Cow position:
               
               

               Alignm length:
               110
               

               Alignm identity:
               89
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               508-607
               

               Cow position:
               
               

               Alignm length:
               100
               

               Alignm identity:
               85
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               0, 0
               
Show alignments to all cow chromosomes.