Cow genome map

Conread name: Ss1.1-Pig4-TMW8047O02.5

Conread position: 1-88
Cow position:
Alignm length: 88
Alignm identity: 77
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 1-88
Cow position:
Alignm length: 88
Alignm identity: 78
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 1-88
Cow position:
Alignm length: 88
Alignm identity: 76
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 1-99
Cow position:
Alignm length: 100
Alignm identity: 85
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 89, 0

Conread position: 79-382
Cow position:
Alignm length: 308
Alignm identity: 183
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 52, 289

Conread position: 79-436
Cow position:
Alignm length: 368
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 323

Conread position: 79-602
Cow position:
Alignm length: 529
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 81

Conread position: 79-607
Cow position:
Alignm length: 540
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 107

Conread position: 81-602
Cow position:
Alignm length: 528
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 12

Conread position: 86-607
Cow position:
Alignm length: 537
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 38

Conread position: 87-285
Cow position:
Alignm length: 200
Alignm identity: 142
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 62, 41

Conread position: 91-435
Cow position:
Alignm length: 359
Alignm identity: 234
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 26, 88

Conread position: 91-590
Cow position:
Alignm length: 509
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 63

Conread position: 91-602
Cow position:
Alignm length: 527
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 98

Conread position: 91-602
Cow position:
Alignm length: 525
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 20

Conread position: 91-607
Cow position:
Alignm length: 535
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 202, 20

Conread position: 91-607
Cow position:
Alignm length: 523
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 103

Conread position: 91-607
Cow position:
Alignm length: 528
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 310

Conread position: 92-585
Cow position:
Alignm length: 505
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 199

Conread position: 92-607
Cow position:
Alignm length: 523
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 126

Conread position: 92-607
Cow position:
Alignm length: 528
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 150

Conread position: 92-607
Cow position:
Alignm length: 527
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 309

Conread position: 93-521
Cow position:
Alignm length: 441
Alignm identity: 281
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 17, 86

Conread position: 94-239
Cow position:
Alignm length: 149
Alignm identity: 116
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 21, 0

Conread position: 94-312
Cow position:
Alignm length: 223
Alignm identity: 161
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 37, 96

Conread position: 94-502
Cow position:
Alignm length: 420
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 103

Conread position: 94-570
Cow position:
Alignm length: 488
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 300

Conread position: 94-583
Cow position:
Alignm length: 500
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 306

Conread position: 94-591
Cow position:
Alignm length: 506
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 54

Conread position: 94-607
Cow position:
Alignm length: 526
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 89

Conread position: 94-607
Cow position:
Alignm length: 524
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 82

Conread position: 94-607
Cow position:
Alignm length: 548
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 61

Conread position: 94-607
Cow position:
Alignm length: 528
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 227

Conread position: 94-607
Cow position:
Alignm length: 519
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 256, 27

Conread position: 94-607
Cow position:
Alignm length: 525
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 64

Conread position: 94-607
Cow position:
Alignm length: 527
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 79

Conread position: 94-608
Cow position:
Alignm length: 526
Alignm identity: 323
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 48, 66

Conread position: 95-327
Cow position:
Alignm length: 237
Alignm identity: 170
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 36, 75

Conread position: 95-579
Cow position:
Alignm length: 489
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 87

Conread position: 95-596
Cow position:
Alignm length: 508
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 57

Conread position: 95-601
Cow position:
Alignm length: 519
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 73

Conread position: 95-605
Cow position:
Alignm length: 524
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 9

Conread position: 95-607
Cow position:
Alignm length: 520
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 302

Conread position: 95-607
Cow position:
Alignm length: 524
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 54

Conread position: 95-607
Cow position:
Alignm length: 521
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 9

Conread position: 95-607
Cow position:
Alignm length: 524
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 95

Conread position: 95-607
Cow position:
Alignm length: 524
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 116

Conread position: 95-607
Cow position:
Alignm length: 524
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 306

Conread position: 95-607
Cow position:
Alignm length: 520
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 100

Conread position: 95-607
Cow position:
Alignm length: 525
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 9

Conread position: 95-607
Cow position:
Alignm length: 520
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 267, 166

Conread position: 95-608
Cow position:
Alignm length: 523
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 9

Conread position: 96-434
Cow position:
Alignm length: 350
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 90

Conread position: 96-495
Cow position:
Alignm length: 411
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 52

Conread position: 96-607
Cow position:
Alignm length: 526
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 308

Conread position: 96-607
Cow position:
Alignm length: 523
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 305

Conread position: 97-595
Cow position:
Alignm length: 511
Alignm identity: 330
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 122, 22

Conread position: 97-607
Cow position:
Alignm length: 520
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 303

Conread position: 97-607
Cow position:
Alignm length: 522
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 93

Conread position: 97-607
Cow position:
Alignm length: 522
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 61

Conread position: 98-607
Cow position:
Alignm length: 518
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 62

Conread position: 99-289
Cow position:
Alignm length: 194
Alignm identity: 139
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 29, 12

Conread position: 100-608
Cow position:
Alignm length: 520
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 28

Conread position: 102-471
Cow position:
Alignm length: 409
Alignm identity: 282
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 7, 318

Conread position: 105-601
Cow position:
Alignm length: 502
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 17

Conread position: 106-608
Cow position:
Alignm length: 514
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 233

Conread position: 109-604
Cow position:
Alignm length: 514
Alignm identity: 335
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 185, 83

Conread position: 110-607
Cow position:
Alignm length: 518
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 52

Conread position: 111-371
Cow position:
Alignm length: 263
Alignm identity: 187
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 23, 71

Conread position: 111-601
Cow position:
Alignm length: 507
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 79

Conread position: 111-607
Cow position:
Alignm length: 509
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 291

Conread position: 112-601
Cow position:
Alignm length: 500
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 63

Conread position: 112-607
Cow position:
Alignm length: 524
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 109

Conread position: 115-362
Cow position:
Alignm length: 255
Alignm identity: 181
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 21, 68

Conread position: 115-362
Cow position:
Alignm length: 257
Alignm identity: 183
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 24, 100

Conread position: 119-581
Cow position:
Alignm length: 478
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 68

Conread position: 130-607
Cow position:
Alignm length: 487
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 269

Conread position: 131-607
Cow position:
Alignm length: 487
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 28

Conread position: 136-533
Cow position:
Alignm length: 407
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 263

Conread position: 142-607
Cow position:
Alignm length: 470
Alignm identity: 293
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 155, 50

Conread position: 144-589
Cow position:
Alignm length: 459
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 277

Conread position: 144-602
Cow position:
Alignm length: 465
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 15

Conread position: 163-607
Cow position:
Alignm length: 455
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 18

Conread position: 181-492
Cow position:
Alignm length: 321
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 150

Conread position: 184-604
Cow position:
Alignm length: 429
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 287

Conread position: 185-607
Cow position:
Alignm length: 431
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 183, 209

Conread position: 189-608
Cow position:
Alignm length: 431
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 212

Conread position: 195-607
Cow position:
Alignm length: 418
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 14

Conread position: 210-604
Cow position:
Alignm length: 400
Alignm identity: 261
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 37, 28

Conread position: 223-563
Cow position:
Alignm length: 350
Alignm identity: 242
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 25, 110

Conread position: 223-605
Cow position:
Alignm length: 393
Alignm identity: 268
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 67, 183

Conread position: 232-607
Cow position:
Alignm length: 379
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 167, 137

Conread position: 238-607
Cow position:
Alignm length: 379
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 165

Conread position: 253-607
Cow position:
Alignm length: 364
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 147

Conread position: 280-601
Cow position:
Alignm length: 330
Alignm identity: 234
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 13, 117

Conread position: 282-584
Cow position:
Alignm length: 306
Alignm identity: 200
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 12, 72

Conread position: 282-607
Cow position:
Alignm length: 335
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 5

Conread position: 284-607
Cow position:
Alignm length: 325
Alignm identity: 229
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 174, 84

Conread position: 286-555
Cow position:
Alignm length: 272
Alignm identity: 187
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 77, 184

Conread position: 289-607
Cow position:
Alignm length: 323
Alignm identity: 220
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 79, 40

Conread position: 303-607
Cow position:
Alignm length: 312
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 95

Conread position: 344-612
Cow position:
Alignm length: 279
Alignm identity: 186
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 39, 14

Conread position: 347-518
Cow position:
Alignm length: 173
Alignm identity: 137
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 110, 48

Conread position: 353-599
Cow position:
Alignm length: 249
Alignm identity: 173
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 106, 30

Conread position: 358-602
Cow position:
Alignm length: 246
Alignm identity: 175
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 103, 33

Conread position: 359-607
Cow position:
Alignm length: 250
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 26

Conread position: 375-595
Cow position:
Alignm length: 222
Alignm identity: 159
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 86, 8

Conread position: 375-605
Cow position:
Alignm length: 232
Alignm identity: 168
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 84, 41

Conread position: 425-607
Cow position:
Alignm length: 184
Alignm identity: 148
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 36, 63

Conread position: 427-605
Cow position:
Alignm length: 180
Alignm identity: 147
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 32, 0

Conread position: 435-573
Cow position:
Alignm length: 140
Alignm identity: 109
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 23, 0

Conread position: 451-607
Cow position:
Alignm length: 158
Alignm identity: 125
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 7, 0

Conread position: 460-601
Cow position:
Alignm length: 143
Alignm identity: 118
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 111, 0

Conread position: 479-607
Cow position:
Alignm length: 129
Alignm identity: 105
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 19, 0

Conread position: 506-605
Cow position:
Alignm length: 100
Alignm identity: 82
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 506-607
Cow position:
Alignm length: 102
Alignm identity: 85
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.