Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8047O02.5
        

               Conread position:
               1-88
               

               Cow position:
               
               

               Alignm length:
               88
               

               Alignm identity:
               76
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-88
               

               Cow position:
               
               

               Alignm length:
               88
               

               Alignm identity:
               76
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-88
               

               Cow position:
               
               

               Alignm length:
               88
               

               Alignm identity:
               76
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-88
               

               Cow position:
               
               

               Alignm length:
               88
               

               Alignm identity:
               76
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-88
               

               Cow position:
               
               

               Alignm length:
               88
               

               Alignm identity:
               76
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-88
               

               Cow position:
               
               

               Alignm length:
               88
               

               Alignm identity:
               76
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               76-486
               

               Cow position:
               
               

               Alignm length:
               418
               

               Alignm identity:
               293
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               211, 47
               

               Conread position:
               79-607
               

               Cow position:
               
               

               Alignm length:
               540
               

               Alignm identity:
               397
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 323
               

               Conread position:
               81-607
               

               Cow position:
               
               

               Alignm length:
               544
               

               Alignm identity:
               400
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 5
               

               Conread position:
               84-362
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               195
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               30, 15
               

               Conread position:
               84-607
               

               Cow position:
               
               

               Alignm length:
               535
               

               Alignm identity:
               397
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 5
               

               Conread position:
               89-291
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               154
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               42, 15
               

               Conread position:
               89-607
               

               Cow position:
               
               

               Alignm length:
               530
               

               Alignm identity:
               382
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 312
               

               Conread position:
               91-605
               

               Cow position:
               
               

               Alignm length:
               525
               

               Alignm identity:
               361
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 109
               

               Conread position:
               91-607
               

               Cow position:
               
               

               Alignm length:
               527
               

               Alignm identity:
               384
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 87
               

               Conread position:
               92-299
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               159
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               39, 90
               

               Conread position:
               92-584
               

               Cow position:
               
               

               Alignm length:
               503
               

               Alignm identity:
               340
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 23
               

               Conread position:
               92-605
               

               Cow position:
               
               

               Alignm length:
               533
               

               Alignm identity:
               374
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 311
               

               Conread position:
               92-607
               

               Cow position:
               
               

               Alignm length:
               524
               

               Alignm identity:
               402
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 37
               

               Conread position:
               94-312
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               156
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               37, 17
               

               Conread position:
               94-397
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               231
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               151, 16
               

               Conread position:
               94-607
               

               Cow position:
               
               

               Alignm length:
               525
               

               Alignm identity:
               385
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 308
               

               Conread position:
               94-607
               

               Cow position:
               
               

               Alignm length:
               529
               

               Alignm identity:
               380
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 100
               

               Conread position:
               94-607
               

               Cow position:
               
               

               Alignm length:
               527
               

               Alignm identity:
               385
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 313
               

               Conread position:
               94-607
               

               Cow position:
               
               

               Alignm length:
               528
               

               Alignm identity:
               379
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 310
               

               Conread position:
               94-607
               

               Cow position:
               
               

               Alignm length:
               525
               

               Alignm identity:
               390
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 10
               

               Conread position:
               95-297
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               151
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               45, 97
               

               Conread position:
               95-570
               

               Cow position:
               
               

               Alignm length:
               488
               

               Alignm identity:
               353
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 63
               

               Conread position:
               95-593
               

               Cow position:
               
               

               Alignm length:
               509
               

               Alignm identity:
               355
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 286
               

               Conread position:
               95-599
               

               Cow position:
               
               

               Alignm length:
               517
               

               Alignm identity:
               380
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 97
               

               Conread position:
               95-602
               

               Cow position:
               
               

               Alignm length:
               520
               

               Alignm identity:
               377
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 179
               

               Conread position:
               95-603
               

               Cow position:
               
               

               Alignm length:
               523
               

               Alignm identity:
               376
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 9
               

               Conread position:
               95-607
               

               Cow position:
               
               

               Alignm length:
               516
               

               Alignm identity:
               358
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 145
               

               Conread position:
               95-607
               

               Cow position:
               
               

               Alignm length:
               522
               

               Alignm identity:
               373
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 94
               

               Conread position:
               95-607
               

               Cow position:
               
               

               Alignm length:
               529
               

               Alignm identity:
               385
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 9
               

               Conread position:
               95-607
               

               Cow position:
               
               

               Alignm length:
               524
               

               Alignm identity:
               371
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 301
               

               Conread position:
               95-607
               

               Cow position:
               
               

               Alignm length:
               525
               

               Alignm identity:
               373
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 301
               

               Conread position:
               97-291
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               147
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               25, 7
               

               Conread position:
               97-362
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               197
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               34, 95
               

               Conread position:
               97-605
               

               Cow position:
               
               

               Alignm length:
               521
               

               Alignm identity:
               389
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 95
               

               Conread position:
               97-607
               

               Cow position:
               
               

               Alignm length:
               520
               

               Alignm identity:
               385
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 304
               

               Conread position:
               97-607
               

               Cow position:
               
               

               Alignm length:
               523
               

               Alignm identity:
               395
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 85
               

               Conread position:
               97-607
               

               Cow position:
               
               

               Alignm length:
               517
               

               Alignm identity:
               383
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               210, 62
               

               Conread position:
               98-607
               

               Cow position:
               
               

               Alignm length:
               529
               

               Alignm identity:
               379
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 13
               

               Conread position:
               99-607
               

               Cow position:
               
               

               Alignm length:
               517
               

               Alignm identity:
               376
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 25
               

               Conread position:
               103-332
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               177
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               110-595
               

               Cow position:
               
               

               Alignm length:
               497
               

               Alignm identity:
               362
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               177, 15
               

               Conread position:
               111-602
               

               Cow position:
               
               

               Alignm length:
               502
               

               Alignm identity:
               370
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 290
               

               Conread position:
               111-607
               

               Cow position:
               
               

               Alignm length:
               508
               

               Alignm identity:
               367
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 291
               

               Conread position:
               111-607
               

               Cow position:
               
               

               Alignm length:
               518
               

               Alignm identity:
               350
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 220
               

               Conread position:
               116-347
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               163
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               130-529
               

               Cow position:
               
               

               Alignm length:
               408
               

               Alignm identity:
               297
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               74, 115
               

               Conread position:
               130-607
               

               Cow position:
               
               

               Alignm length:
               481
               

               Alignm identity:
               346
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               160, 258
               

               Conread position:
               131-607
               

               Cow position:
               
               

               Alignm length:
               500
               

               Alignm identity:
               355
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               142, 37
               

               Conread position:
               154-590
               

               Cow position:
               
               

               Alignm length:
               445
               

               Alignm identity:
               269
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               160, 140
               

               Conread position:
               159-384
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               158
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               134, 36
               

               Conread position:
               162-605
               

               Cow position:
               
               

               Alignm length:
               451
               

               Alignm identity:
               350
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               201, 236
               

               Conread position:
               181-607
               

               Cow position:
               
               

               Alignm length:
               436
               

               Alignm identity:
               318
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               113, 218
               

               Conread position:
               184-599
               

               Cow position:
               
               

               Alignm length:
               426
               

               Alignm identity:
               323
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               77, 45
               

               Conread position:
               185-607
               

               Cow position:
               
               

               Alignm length:
               450
               

               Alignm identity:
               322
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               102, 230
               

               Conread position:
               189-607
               

               Cow position:
               
               

               Alignm length:
               430
               

               Alignm identity:
               305
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 212
               

               Conread position:
               210-606
               

               Cow position:
               
               

               Alignm length:
               402
               

               Alignm identity:
               292
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 47
               

               Conread position:
               211-605
               

               Cow position:
               
               

               Alignm length:
               402
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 160
               

               Conread position:
               214-604
               

               Cow position:
               
               

               Alignm length:
               395
               

               Alignm identity:
               260
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               80, 94
               

               Conread position:
               229-607
               

               Cow position:
               
               

               Alignm length:
               393
               

               Alignm identity:
               295
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 19
               

               Conread position:
               258-607
               

               Cow position:
               
               

               Alignm length:
               353
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 51
               

               Conread position:
               264-607
               

               Cow position:
               
               

               Alignm length:
               360
               

               Alignm identity:
               282
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 62
               

               Conread position:
               269-583
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               238
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 117
               

               Conread position:
               289-607
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               228
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               91, 147
               

               Conread position:
               353-605
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               196
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               105, 0
               

               Conread position:
               353-616
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               178
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               358-609
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               182
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               102, 19
               

               Conread position:
               371-521
               

               Cow position:
               
               

               Alignm length:
               152
               

               Alignm identity:
               115
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               87, 20
               

               Conread position:
               372-590
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               160
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               30, 13
               

               Conread position:
               387-601
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               157
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               408-605
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               8, 37
               

               Conread position:
               415-607
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               148
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               46, 6
               

               Conread position:
               416-607
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               143
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               25, 9
               

               Conread position:
               445-607
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               128
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               13, 0
               
Show alignments to all cow chromosomes.