Cow genome map
Conread name: | Ss1.1-Pig4-TMW8047O02.5 |
Conread position: | 1-88 |
Cow position: | chr24:6440134-6440047 (view UCSC Genome Browser custom track) |
Alignm length: | 88 |
Alignm identity: | 77 |
Alignm E-value: | 4e-22 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 1-88 |
Cow position: | chr24:11150740-11150827 (view UCSC Genome Browser custom track) |
Alignm length: | 88 |
Alignm identity: | 76 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 1-88 |
Cow position: | chr24:17454749-17454836 (view UCSC Genome Browser custom track) |
Alignm length: | 88 |
Alignm identity: | 76 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 1-88 |
Cow position: | chr24:18212748-18212661 (view UCSC Genome Browser custom track) |
Alignm length: | 88 |
Alignm identity: | 76 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 4-88 |
Cow position: | chr24:36724443-36724359 (view UCSC Genome Browser custom track) |
Alignm length: | 85 |
Alignm identity: | 74 |
Alignm E-value: | 1e-20 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 79-345 |
Cow position: | chr24:13021433-13021699 (view UCSC Genome Browser custom track) |
Alignm length: | 271 |
Alignm identity: | 191 |
Alignm E-value: | 6e-37 |
Alignm gaps (pig, cow): | 52, 111 |
Conread position: | 79-466 |
Cow position: | chr24:2635881-2636275 (view UCSC Genome Browser custom track) |
Alignm length: | 398 |
Alignm identity: | 290 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 52, 323 |
Conread position: | 79-607 |
Cow position: | chr24:22792938-22793471 (view UCSC Genome Browser custom track) |
Alignm length: | 538 |
Alignm identity: | 399 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 52, 111 |
Conread position: | 79-607 |
Cow position: | chr24:44017307-44017845 (view UCSC Genome Browser custom track) |
Alignm length: | 540 |
Alignm identity: | 397 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 52, 323 |
Conread position: | 84-605 |
Cow position: | chr24:6351957-6352481 (view UCSC Genome Browser custom track) |
Alignm length: | 544 |
Alignm identity: | 365 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 32, 224 |
Conread position: | 84-607 |
Cow position: | chr24:13187955-13188472 (view UCSC Genome Browser custom track) |
Alignm length: | 538 |
Alignm identity: | 375 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 47, 5 |
Conread position: | 87-604 |
Cow position: | chr24:12568024-12568523 (view UCSC Genome Browser custom track) |
Alignm length: | 525 |
Alignm identity: | 357 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 53, 24 |
Conread position: | 89-430 |
Cow position: | chr24:36296945-36297280 (view UCSC Genome Browser custom track) |
Alignm length: | 348 |
Alignm identity: | 224 |
Alignm E-value: | 2e-26 |
Alignm gaps (pig, cow): | 204, 26 |
Conread position: | 91-408 |
Cow position: | chr24:12288948-12288630 (view UCSC Genome Browser custom track) |
Alignm length: | 326 |
Alignm identity: | 240 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 40, 20 |
Conread position: | 91-477 |
Cow position: | chr24:17187317-17187709 (view UCSC Genome Browser custom track) |
Alignm length: | 405 |
Alignm identity: | 298 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 20, 185 |
Conread position: | 91-523 |
Cow position: | chr24:38635519-38635969 (view UCSC Genome Browser custom track) |
Alignm length: | 462 |
Alignm identity: | 322 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 92, 13 |
Conread position: | 92-607 |
Cow position: | chr24:12114261-12113748 (view UCSC Genome Browser custom track) |
Alignm length: | 524 |
Alignm identity: | 370 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 5, 100 |
Conread position: | 92-607 |
Cow position: | chr24:14384837-14384316 (view UCSC Genome Browser custom track) |
Alignm length: | 529 |
Alignm identity: | 367 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 39, 119 |
Conread position: | 92-607 |
Cow position: | chr24:15392529-15392041 (view UCSC Genome Browser custom track) |
Alignm length: | 522 |
Alignm identity: | 387 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 48, 70 |
Conread position: | 92-608 |
Cow position: | chr24:12236832-12237354 (view UCSC Genome Browser custom track) |
Alignm length: | 530 |
Alignm identity: | 382 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 39, 19 |
Conread position: | 93-603 |
Cow position: | chr24:35841839-35841328 (view UCSC Genome Browser custom track) |
Alignm length: | 519 |
Alignm identity: | 381 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 17, 169 |
Conread position: | 93-603 |
Cow position: | chr24:37321824-37321316 (view UCSC Genome Browser custom track) |
Alignm length: | 525 |
Alignm identity: | 322 |
Alignm E-value: | 1e-20 |
Alignm gaps (pig, cow): | 41, 55 |
Conread position: | 94-465 |
Cow position: | chr24:6645194-6645570 (view UCSC Genome Browser custom track) |
Alignm length: | 381 |
Alignm identity: | 272 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 43, 96 |
Conread position: | 94-466 |
Cow position: | chr24:7060880-7061258 (view UCSC Genome Browser custom track) |
Alignm length: | 383 |
Alignm identity: | 278 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 37, 17 |
Conread position: | 94-589 |
Cow position: | chr24:6537338-6537822 (view UCSC Genome Browser custom track) |
Alignm length: | 499 |
Alignm identity: | 327 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 43, 104 |
Conread position: | 94-596 |
Cow position: | chr24:12797984-12797480 (view UCSC Genome Browser custom track) |
Alignm length: | 511 |
Alignm identity: | 378 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 40, 100 |
Conread position: | 94-605 |
Cow position: | chr24:6025320-6024801 (view UCSC Genome Browser custom track) |
Alignm length: | 524 |
Alignm identity: | 379 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 37, 303 |
Conread position: | 94-605 |
Cow position: | chr24:14885462-14884957 (view UCSC Genome Browser custom track) |
Alignm length: | 526 |
Alignm identity: | 354 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 24, 93 |
Conread position: | 94-605 |
Cow position: | chr24:36707636-36708143 (view UCSC Genome Browser custom track) |
Alignm length: | 517 |
Alignm identity: | 372 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 199, 90 |
Conread position: | 94-607 |
Cow position: | chr24:4415748-4415230 (view UCSC Genome Browser custom track) |
Alignm length: | 523 |
Alignm identity: | 379 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 24, 140 |
Conread position: | 94-607 |
Cow position: | chr24:6083793-6084316 (view UCSC Genome Browser custom track) |
Alignm length: | 525 |
Alignm identity: | 387 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 37, 307 |
Conread position: | 94-607 |
Cow position: | chr24:6434017-6434539 (view UCSC Genome Browser custom track) |
Alignm length: | 524 |
Alignm identity: | 390 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 34, 308 |
Conread position: | 94-607 |
Cow position: | chr24:8029927-8030450 (view UCSC Genome Browser custom track) |
Alignm length: | 525 |
Alignm identity: | 386 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 37, 308 |
Conread position: | 94-607 |
Cow position: | chr24:9188955-9188433 (view UCSC Genome Browser custom track) |
Alignm length: | 525 |
Alignm identity: | 383 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 37, 308 |
Conread position: | 94-607 |
Cow position: | chr24:12485541-12485018 (view UCSC Genome Browser custom track) |
Alignm length: | 525 |
Alignm identity: | 380 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 37, 308 |
Conread position: | 94-607 |
Cow position: | chr24:16649521-16649018 (view UCSC Genome Browser custom track) |
Alignm length: | 519 |
Alignm identity: | 375 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 199, 10 |
Conread position: | 94-607 |
Cow position: | chr24:33739566-33739041 (view UCSC Genome Browser custom track) |
Alignm length: | 531 |
Alignm identity: | 377 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 199, 314 |
Conread position: | 94-607 |
Cow position: | chr24:35838848-35838321 (view UCSC Genome Browser custom track) |
Alignm length: | 533 |
Alignm identity: | 400 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 37, 21 |
Conread position: | 95-528 |
Cow position: | chr24:14390944-14390511 (view UCSC Genome Browser custom track) |
Alignm length: | 445 |
Alignm identity: | 334 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 36, 87 |
Conread position: | 95-564 |
Cow position: | chr24:12161656-12162130 (view UCSC Genome Browser custom track) |
Alignm length: | 481 |
Alignm identity: | 348 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 14, 57 |
Conread position: | 95-607 |
Cow position: | chr24:6145137-6145667 (view UCSC Genome Browser custom track) |
Alignm length: | 533 |
Alignm identity: | 376 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 67 |
Conread position: | 95-607 |
Cow position: | chr24:12085977-12086497 (view UCSC Genome Browser custom track) |
Alignm length: | 527 |
Alignm identity: | 395 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 36, 76 |
Conread position: | 95-608 |
Cow position: | chr24:6335472-6335982 (view UCSC Genome Browser custom track) |
Alignm length: | 524 |
Alignm identity: | 372 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 45, 169 |
Conread position: | 97-415 |
Cow position: | chr24:13531755-13531430 (view UCSC Genome Browser custom track) |
Alignm length: | 331 |
Alignm identity: | 245 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 16, 93 |
Conread position: | 97-605 |
Cow position: | chr24:14873563-14873053 (view UCSC Genome Browser custom track) |
Alignm length: | 518 |
Alignm identity: | 348 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 15, 176 |
Conread position: | 98-526 |
Cow position: | chr24:39678212-39678627 (view UCSC Genome Browser custom track) |
Alignm length: | 433 |
Alignm identity: | 322 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 33, 107 |
Conread position: | 98-607 |
Cow position: | chr24:33933150-33933665 (view UCSC Genome Browser custom track) |
Alignm length: | 521 |
Alignm identity: | 376 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 29, 13 |
Conread position: | 99-607 |
Cow position: | chr24:19833167-19833684 (view UCSC Genome Browser custom track) |
Alignm length: | 524 |
Alignm identity: | 384 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 32, 12 |
Conread position: | 100-555 |
Cow position: | chr24:12131704-12131239 (view UCSC Genome Browser custom track) |
Alignm length: | 470 |
Alignm identity: | 298 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 25, 118 |
Conread position: | 104-310 |
Cow position: | chr24:12207927-12208128 (view UCSC Genome Browser custom track) |
Alignm length: | 211 |
Alignm identity: | 150 |
Alignm E-value: | 4e-23 |
Alignm gaps (pig, cow): | 13, 58 |
Conread position: | 104-601 |
Cow position: | chr24:12939994-12940486 (view UCSC Genome Browser custom track) |
Alignm length: | 505 |
Alignm identity: | 326 |
Alignm E-value: | 5.60519e-45 |
Alignm gaps (pig, cow): | 37, 136 |
Conread position: | 106-602 |
Cow position: | chr24:1447358-1447848 (view UCSC Genome Browser custom track) |
Alignm length: | 505 |
Alignm identity: | 353 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 25, 80 |
Conread position: | 110-528 |
Cow position: | chr24:6048049-6048478 (view UCSC Genome Browser custom track) |
Alignm length: | 435 |
Alignm identity: | 278 |
Alignm E-value: | 1e-31 |
Alignm gaps (pig, cow): | 29, 76 |
Conread position: | 111-607 |
Cow position: | chr24:16084867-16084360 (view UCSC Genome Browser custom track) |
Alignm length: | 509 |
Alignm identity: | 372 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 23, 285 |
Conread position: | 141-301 |
Cow position: | chr24:30117315-30117476 (view UCSC Genome Browser custom track) |
Alignm length: | 163 |
Alignm identity: | 116 |
Alignm E-value: | 1e-20 |
Alignm gaps (pig, cow): | 152, 30 |
Conread position: | 151-563 |
Cow position: | chr24:6515209-6514790 (view UCSC Genome Browser custom track) |
Alignm length: | 426 |
Alignm identity: | 277 |
Alignm E-value: | 2e-36 |
Alignm gaps (pig, cow): | 8, 15 |
Conread position: | 157-578 |
Cow position: | chr24:17303755-17303342 (view UCSC Genome Browser custom track) |
Alignm length: | 428 |
Alignm identity: | 283 |
Alignm E-value: | 8e-40 |
Alignm gaps (pig, cow): | 185, 81 |
Conread position: | 159-608 |
Cow position: | chr24:36560240-36559787 (view UCSC Genome Browser custom track) |
Alignm length: | 455 |
Alignm identity: | 351 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 134, 238 |
Conread position: | 162-373 |
Cow position: | chr24:14282758-14282550 (view UCSC Genome Browser custom track) |
Alignm length: | 214 |
Alignm identity: | 148 |
Alignm E-value: | 5e-24 |
Alignm gaps (pig, cow): | 128, 29 |
Conread position: | 162-599 |
Cow position: | chr24:22951982-22952427 (view UCSC Genome Browser custom track) |
Alignm length: | 447 |
Alignm identity: | 336 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 129, 237 |
Conread position: | 162-607 |
Cow position: | chr24:14584940-14585375 (view UCSC Genome Browser custom track) |
Alignm length: | 449 |
Alignm identity: | 342 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 129, 115 |
Conread position: | 168-607 |
Cow position: | chr24:148763-148320 (view UCSC Genome Browser custom track) |
Alignm length: | 447 |
Alignm identity: | 316 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 28, 94 |
Conread position: | 170-607 |
Cow position: | chr24:9092419-9091986 (view UCSC Genome Browser custom track) |
Alignm length: | 444 |
Alignm identity: | 322 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 123, 213 |
Conread position: | 180-607 |
Cow position: | chr24:40548738-40549173 (view UCSC Genome Browser custom track) |
Alignm length: | 441 |
Alignm identity: | 334 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 13, 224 |
Conread position: | 193-607 |
Cow position: | chr24:12335915-12335475 (view UCSC Genome Browser custom track) |
Alignm length: | 441 |
Alignm identity: | 315 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 100, 0 |
Conread position: | 199-438 |
Cow position: | chr24:35987464-35987228 (view UCSC Genome Browser custom track) |
Alignm length: | 244 |
Alignm identity: | 175 |
Alignm E-value: | 1e-32 |
Alignm gaps (pig, cow): | 29, 10 |
Conread position: | 210-521 |
Cow position: | chr24:40654283-40654599 (view UCSC Genome Browser custom track) |
Alignm length: | 323 |
Alignm identity: | 231 |
Alignm E-value: | 1.00053e-42 |
Alignm gaps (pig, cow): | 22, 62 |
Conread position: | 231-607 |
Cow position: | chr24:37216919-37217298 (view UCSC Genome Browser custom track) |
Alignm length: | 386 |
Alignm identity: | 295 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 56, 163 |
Conread position: | 243-451 |
Cow position: | chr24:14333027-14333241 (view UCSC Genome Browser custom track) |
Alignm length: | 216 |
Alignm identity: | 150 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 10, 155 |
Conread position: | 256-602 |
Cow position: | chr24:6660668-6660305 (view UCSC Genome Browser custom track) |
Alignm length: | 366 |
Alignm identity: | 266 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 31, 143 |
Conread position: | 296-607 |
Cow position: | chr24:17696985-17696679 (view UCSC Genome Browser custom track) |
Alignm length: | 315 |
Alignm identity: | 232 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 72, 18 |
Conread position: | 328-605 |
Cow position: | chr24:12146116-12145834 (view UCSC Genome Browser custom track) |
Alignm length: | 287 |
Alignm identity: | 187 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 35, 59 |
Conread position: | 330-604 |
Cow position: | chr24:14300858-14301139 (view UCSC Genome Browser custom track) |
Alignm length: | 288 |
Alignm identity: | 194 |
Alignm E-value: | 5e-24 |
Alignm gaps (pig, cow): | 130, 63 |
Conread position: | 342-599 |
Cow position: | chr24:13524139-13524395 (view UCSC Genome Browser custom track) |
Alignm length: | 259 |
Alignm identity: | 191 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 115, 50 |
Conread position: | 353-601 |
Cow position: | chr24:7091550-7091301 (view UCSC Genome Browser custom track) |
Alignm length: | 256 |
Alignm identity: | 181 |
Alignm E-value: | 9e-31 |
Alignm gaps (pig, cow): | 114, 32 |
Conread position: | 359-607 |
Cow position: | chr24:29187334-29187582 (view UCSC Genome Browser custom track) |
Alignm length: | 250 |
Alignm identity: | 192 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 102, 32 |
Conread position: | 371-602 |
Cow position: | chr24:1438120-1437894 (view UCSC Genome Browser custom track) |
Alignm length: | 233 |
Alignm identity: | 163 |
Alignm E-value: | 3e-29 |
Alignm gaps (pig, cow): | 86, 21 |
Conread position: | 397-601 |
Cow position: | chr24:12288307-12288098 (view UCSC Genome Browser custom track) |
Alignm length: | 213 |
Alignm identity: | 162 |
Alignm E-value: | 5e-36 |
Alignm gaps (pig, cow): | 62, 144 |
Conread position: | 418-594 |
Cow position: | chr24:6510723-6510546 (view UCSC Genome Browser custom track) |
Alignm length: | 178 |
Alignm identity: | 125 |
Alignm E-value: | 5e-24 |
Alignm gaps (pig, cow): | 40, 0 |
Conread position: | 434-607 |
Cow position: | chr24:6645827-6646002 (view UCSC Genome Browser custom track) |
Alignm length: | 176 |
Alignm identity: | 141 |
Alignm E-value: | 2e-39 |
Alignm gaps (pig, cow): | 19, 0 |
Conread position: | 459-607 |
Cow position: | chr24:7061540-7061688 (view UCSC Genome Browser custom track) |
Alignm length: | 149 |
Alignm identity: | 118 |
Alignm E-value: | 3e-32 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 483-607 |
Cow position: | chr24:5993054-5992930 (view UCSC Genome Browser custom track) |
Alignm length: | 125 |
Alignm identity: | 100 |
Alignm E-value: | 2e-26 |
Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.