Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8047O02.5
        

               Conread position:
               1-88
               

               Cow position:
               
               

               Alignm length:
               88
               

               Alignm identity:
               77
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-88
               

               Cow position:
               
               

               Alignm length:
               88
               

               Alignm identity:
               76
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-88
               

               Cow position:
               
               

               Alignm length:
               88
               

               Alignm identity:
               76
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-88
               

               Cow position:
               
               

               Alignm length:
               88
               

               Alignm identity:
               76
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               4-88
               

               Cow position:
               
               

               Alignm length:
               85
               

               Alignm identity:
               74
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               79-345
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               191
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               52, 111
               

               Conread position:
               79-466
               

               Cow position:
               
               

               Alignm length:
               398
               

               Alignm identity:
               290
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 323
               

               Conread position:
               79-607
               

               Cow position:
               
               

               Alignm length:
               538
               

               Alignm identity:
               399
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 111
               

               Conread position:
               79-607
               

               Cow position:
               
               

               Alignm length:
               540
               

               Alignm identity:
               397
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 323
               

               Conread position:
               84-605
               

               Cow position:
               
               

               Alignm length:
               544
               

               Alignm identity:
               365
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 224
               

               Conread position:
               84-607
               

               Cow position:
               
               

               Alignm length:
               538
               

               Alignm identity:
               375
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 5
               

               Conread position:
               87-604
               

               Cow position:
               
               

               Alignm length:
               525
               

               Alignm identity:
               357
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 24
               

               Conread position:
               89-430
               

               Cow position:
               
               

               Alignm length:
               348
               

               Alignm identity:
               224
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               204, 26
               

               Conread position:
               91-408
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               240
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 20
               

               Conread position:
               91-477
               

               Cow position:
               
               

               Alignm length:
               405
               

               Alignm identity:
               298
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 185
               

               Conread position:
               91-523
               

               Cow position:
               
               

               Alignm length:
               462
               

               Alignm identity:
               322
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               92, 13
               

               Conread position:
               92-607
               

               Cow position:
               
               

               Alignm length:
               524
               

               Alignm identity:
               370
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               5, 100
               

               Conread position:
               92-607
               

               Cow position:
               
               

               Alignm length:
               529
               

               Alignm identity:
               367
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 119
               

               Conread position:
               92-607
               

               Cow position:
               
               

               Alignm length:
               522
               

               Alignm identity:
               387
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 70
               

               Conread position:
               92-608
               

               Cow position:
               
               

               Alignm length:
               530
               

               Alignm identity:
               382
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 19
               

               Conread position:
               93-603
               

               Cow position:
               
               

               Alignm length:
               519
               

               Alignm identity:
               381
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 169
               

               Conread position:
               93-603
               

               Cow position:
               
               

               Alignm length:
               525
               

               Alignm identity:
               322
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               41, 55
               

               Conread position:
               94-465
               

               Cow position:
               
               

               Alignm length:
               381
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 96
               

               Conread position:
               94-466
               

               Cow position:
               
               

               Alignm length:
               383
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 17
               

               Conread position:
               94-589
               

               Cow position:
               
               

               Alignm length:
               499
               

               Alignm identity:
               327
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 104
               

               Conread position:
               94-596
               

               Cow position:
               
               

               Alignm length:
               511
               

               Alignm identity:
               378
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 100
               

               Conread position:
               94-605
               

               Cow position:
               
               

               Alignm length:
               524
               

               Alignm identity:
               379
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 303
               

               Conread position:
               94-605
               

               Cow position:
               
               

               Alignm length:
               526
               

               Alignm identity:
               354
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 93
               

               Conread position:
               94-605
               

               Cow position:
               
               

               Alignm length:
               517
               

               Alignm identity:
               372
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               199, 90
               

               Conread position:
               94-607
               

               Cow position:
               
               

               Alignm length:
               523
               

               Alignm identity:
               379
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 140
               

               Conread position:
               94-607
               

               Cow position:
               
               

               Alignm length:
               525
               

               Alignm identity:
               387
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 307
               

               Conread position:
               94-607
               

               Cow position:
               
               

               Alignm length:
               524
               

               Alignm identity:
               390
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 308
               

               Conread position:
               94-607
               

               Cow position:
               
               

               Alignm length:
               525
               

               Alignm identity:
               386
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 308
               

               Conread position:
               94-607
               

               Cow position:
               
               

               Alignm length:
               525
               

               Alignm identity:
               383
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 308
               

               Conread position:
               94-607
               

               Cow position:
               
               

               Alignm length:
               525
               

               Alignm identity:
               380
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 308
               

               Conread position:
               94-607
               

               Cow position:
               
               

               Alignm length:
               519
               

               Alignm identity:
               375
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               199, 10
               

               Conread position:
               94-607
               

               Cow position:
               
               

               Alignm length:
               531
               

               Alignm identity:
               377
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               199, 314
               

               Conread position:
               94-607
               

               Cow position:
               
               

               Alignm length:
               533
               

               Alignm identity:
               400
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 21
               

               Conread position:
               95-528
               

               Cow position:
               
               

               Alignm length:
               445
               

               Alignm identity:
               334
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 87
               

               Conread position:
               95-564
               

               Cow position:
               
               

               Alignm length:
               481
               

               Alignm identity:
               348
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 57
               

               Conread position:
               95-607
               

               Cow position:
               
               

               Alignm length:
               533
               

               Alignm identity:
               376
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 67
               

               Conread position:
               95-607
               

               Cow position:
               
               

               Alignm length:
               527
               

               Alignm identity:
               395
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 76
               

               Conread position:
               95-608
               

               Cow position:
               
               

               Alignm length:
               524
               

               Alignm identity:
               372
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 169
               

               Conread position:
               97-415
               

               Cow position:
               
               

               Alignm length:
               331
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 93
               

               Conread position:
               97-605
               

               Cow position:
               
               

               Alignm length:
               518
               

               Alignm identity:
               348
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 176
               

               Conread position:
               98-526
               

               Cow position:
               
               

               Alignm length:
               433
               

               Alignm identity:
               322
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 107
               

               Conread position:
               98-607
               

               Cow position:
               
               

               Alignm length:
               521
               

               Alignm identity:
               376
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 13
               

               Conread position:
               99-607
               

               Cow position:
               
               

               Alignm length:
               524
               

               Alignm identity:
               384
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 12
               

               Conread position:
               100-555
               

               Cow position:
               
               

               Alignm length:
               470
               

               Alignm identity:
               298
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 118
               

               Conread position:
               104-310
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               150
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               13, 58
               

               Conread position:
               104-601
               

               Cow position:
               
               

               Alignm length:
               505
               

               Alignm identity:
               326
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               37, 136
               

               Conread position:
               106-602
               

               Cow position:
               
               

               Alignm length:
               505
               

               Alignm identity:
               353
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 80
               

               Conread position:
               110-528
               

               Cow position:
               
               

               Alignm length:
               435
               

               Alignm identity:
               278
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               29, 76
               

               Conread position:
               111-607
               

               Cow position:
               
               

               Alignm length:
               509
               

               Alignm identity:
               372
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 285
               

               Conread position:
               141-301
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               116
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               152, 30
               

               Conread position:
               151-563
               

               Cow position:
               
               

               Alignm length:
               426
               

               Alignm identity:
               277
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               8, 15
               

               Conread position:
               157-578
               

               Cow position:
               
               

               Alignm length:
               428
               

               Alignm identity:
               283
               

               Alignm E-value:
               8e-40
               

               Alignm gaps (pig, cow):
               185, 81
               

               Conread position:
               159-608
               

               Cow position:
               
               

               Alignm length:
               455
               

               Alignm identity:
               351
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               134, 238
               

               Conread position:
               162-373
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               148
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               128, 29
               

               Conread position:
               162-599
               

               Cow position:
               
               

               Alignm length:
               447
               

               Alignm identity:
               336
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               129, 237
               

               Conread position:
               162-607
               

               Cow position:
               
               

               Alignm length:
               449
               

               Alignm identity:
               342
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               129, 115
               

               Conread position:
               168-607
               

               Cow position:
               
               

               Alignm length:
               447
               

               Alignm identity:
               316
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 94
               

               Conread position:
               170-607
               

               Cow position:
               
               

               Alignm length:
               444
               

               Alignm identity:
               322
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               123, 213
               

               Conread position:
               180-607
               

               Cow position:
               
               

               Alignm length:
               441
               

               Alignm identity:
               334
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 224
               

               Conread position:
               193-607
               

               Cow position:
               
               

               Alignm length:
               441
               

               Alignm identity:
               315
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               100, 0
               

               Conread position:
               199-438
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               175
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               29, 10
               

               Conread position:
               210-521
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               231
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               22, 62
               

               Conread position:
               231-607
               

               Cow position:
               
               

               Alignm length:
               386
               

               Alignm identity:
               295
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 163
               

               Conread position:
               243-451
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               10, 155
               

               Conread position:
               256-602
               

               Cow position:
               
               

               Alignm length:
               366
               

               Alignm identity:
               266
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 143
               

               Conread position:
               296-607
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               232
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 18
               

               Conread position:
               328-605
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               187
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               35, 59
               

               Conread position:
               330-604
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               194
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               130, 63
               

               Conread position:
               342-599
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               191
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               115, 50
               

               Conread position:
               353-601
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               181
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               114, 32
               

               Conread position:
               359-607
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               192
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               102, 32
               

               Conread position:
               371-602
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               163
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               86, 21
               

               Conread position:
               397-601
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               162
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               62, 144
               

               Conread position:
               418-594
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               125
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               434-607
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               459-607
               

               Cow position:
               
               

               Alignm length:
               149
               

               Alignm identity:
               118
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               483-607
               

               Cow position:
               
               

               Alignm length:
               125
               

               Alignm identity:
               100
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               0, 0
               
Show alignments to all cow chromosomes.