Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8047O02.5
        

               Conread position:
               79-509
               

               Cow position:
               
               

               Alignm length:
               442
               

               Alignm identity:
               314
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 32
               

               Conread position:
               79-607
               

               Cow position:
               
               

               Alignm length:
               539
               

               Alignm identity:
               387
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 111
               

               Conread position:
               84-607
               

               Cow position:
               
               

               Alignm length:
               537
               

               Alignm identity:
               392
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 5
               

               Conread position:
               84-607
               

               Cow position:
               
               

               Alignm length:
               533
               

               Alignm identity:
               385
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               209, 5
               

               Conread position:
               87-604
               

               Cow position:
               
               

               Alignm length:
               535
               

               Alignm identity:
               343
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               53, 91
               

               Conread position:
               87-605
               

               Cow position:
               
               

               Alignm length:
               526
               

               Alignm identity:
               359
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 100
               

               Conread position:
               87-607
               

               Cow position:
               
               

               Alignm length:
               531
               

               Alignm identity:
               372
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 28
               

               Conread position:
               90-362
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               204
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               100, 28
               

               Conread position:
               91-585
               

               Cow position:
               
               

               Alignm length:
               515
               

               Alignm identity:
               396
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 105
               

               Conread position:
               91-607
               

               Cow position:
               
               

               Alignm length:
               530
               

               Alignm identity:
               397
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               6, 307
               

               Conread position:
               91-607
               

               Cow position:
               
               

               Alignm length:
               524
               

               Alignm identity:
               366
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 57
               

               Conread position:
               92-374
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               204
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               9, 20
               

               Conread position:
               92-606
               

               Cow position:
               
               

               Alignm length:
               526
               

               Alignm identity:
               375
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 12
               

               Conread position:
               93-605
               

               Cow position:
               
               

               Alignm length:
               527
               

               Alignm identity:
               374
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 184
               

               Conread position:
               93-608
               

               Cow position:
               
               

               Alignm length:
               522
               

               Alignm identity:
               332
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               114, 306
               

               Conread position:
               94-389
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               199
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               43, 21
               

               Conread position:
               94-598
               

               Cow position:
               
               

               Alignm length:
               540
               

               Alignm identity:
               354
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               45, 149
               

               Conread position:
               94-601
               

               Cow position:
               
               

               Alignm length:
               519
               

               Alignm identity:
               408
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 161
               

               Conread position:
               94-605
               

               Cow position:
               
               

               Alignm length:
               539
               

               Alignm identity:
               359
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               37, 10
               

               Conread position:
               94-607
               

               Cow position:
               
               

               Alignm length:
               526
               

               Alignm identity:
               370
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 131
               

               Conread position:
               95-601
               

               Cow position:
               
               

               Alignm length:
               518
               

               Alignm identity:
               372
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 65
               

               Conread position:
               95-607
               

               Cow position:
               
               

               Alignm length:
               524
               

               Alignm identity:
               378
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 306
               

               Conread position:
               95-607
               

               Cow position:
               
               

               Alignm length:
               522
               

               Alignm identity:
               384
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 95
               

               Conread position:
               95-607
               

               Cow position:
               
               

               Alignm length:
               525
               

               Alignm identity:
               384
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 301
               

               Conread position:
               95-607
               

               Cow position:
               
               

               Alignm length:
               523
               

               Alignm identity:
               377
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 306
               

               Conread position:
               95-607
               

               Cow position:
               
               

               Alignm length:
               524
               

               Alignm identity:
               382
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 69
               

               Conread position:
               95-607
               

               Cow position:
               
               

               Alignm length:
               526
               

               Alignm identity:
               377
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 150
               

               Conread position:
               97-607
               

               Cow position:
               
               

               Alignm length:
               523
               

               Alignm identity:
               394
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 110
               

               Conread position:
               97-607
               

               Cow position:
               
               

               Alignm length:
               517
               

               Alignm identity:
               396
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 85
               

               Conread position:
               97-607
               

               Cow position:
               
               

               Alignm length:
               521
               

               Alignm identity:
               390
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 291
               

               Conread position:
               98-607
               

               Cow position:
               
               

               Alignm length:
               522
               

               Alignm identity:
               373
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 53
               

               Conread position:
               102-607
               

               Cow position:
               
               

               Alignm length:
               517
               

               Alignm identity:
               396
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 60
               

               Conread position:
               104-320
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               163
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               32, 14
               

               Conread position:
               104-480
               

               Cow position:
               
               

               Alignm length:
               395
               

               Alignm identity:
               287
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 14
               

               Conread position:
               105-608
               

               Cow position:
               
               

               Alignm length:
               520
               

               Alignm identity:
               318
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               66, 26
               

               Conread position:
               106-607
               

               Cow position:
               
               

               Alignm length:
               508
               

               Alignm identity:
               364
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 9
               

               Conread position:
               111-605
               

               Cow position:
               
               

               Alignm length:
               509
               

               Alignm identity:
               390
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 294
               

               Conread position:
               111-607
               

               Cow position:
               
               

               Alignm length:
               505
               

               Alignm identity:
               371
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 289
               

               Conread position:
               167-419
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               198
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 229
               

               Conread position:
               190-557
               

               Cow position:
               
               

               Alignm length:
               376
               

               Alignm identity:
               248
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               22, 5
               

               Conread position:
               211-607
               

               Cow position:
               
               

               Alignm length:
               406
               

               Alignm identity:
               295
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               76, 188
               

               Conread position:
               250-604
               

               Cow position:
               
               

               Alignm length:
               367
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 149
               

               Conread position:
               254-608
               

               Cow position:
               
               

               Alignm length:
               364
               

               Alignm identity:
               265
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 150
               

               Conread position:
               287-560
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               180
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               172, 17
               

               Conread position:
               289-607
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 108
               

               Conread position:
               358-607
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               194
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               103, 33
               

               Conread position:
               384-607
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               171
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               74, 183
               

               Conread position:
               388-607
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               178
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 35
               

               Conread position:
               399-607
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               20, 147
               

               Conread position:
               489-607
               

               Cow position:
               
               

               Alignm length:
               120
               

               Alignm identity:
               94
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               9, 0
               
Show alignments to all cow chromosomes.