Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8047O02.5
        

               Conread position:
               1-88
               

               Cow position:
               
               

               Alignm length:
               88
               

               Alignm identity:
               77
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-88
               

               Cow position:
               
               

               Alignm length:
               88
               

               Alignm identity:
               76
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-88
               

               Cow position:
               
               

               Alignm length:
               88
               

               Alignm identity:
               76
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               77-607
               

               Cow position:
               
               

               Alignm length:
               543
               

               Alignm identity:
               406
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 9
               

               Conread position:
               79-607
               

               Cow position:
               
               

               Alignm length:
               540
               

               Alignm identity:
               378
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 77
               

               Conread position:
               79-607
               

               Cow position:
               
               

               Alignm length:
               541
               

               Alignm identity:
               392
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 324
               

               Conread position:
               84-605
               

               Cow position:
               
               

               Alignm length:
               530
               

               Alignm identity:
               348
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 107
               

               Conread position:
               84-607
               

               Cow position:
               
               

               Alignm length:
               534
               

               Alignm identity:
               391
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 5
               

               Conread position:
               84-607
               

               Cow position:
               
               

               Alignm length:
               535
               

               Alignm identity:
               392
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 5
               

               Conread position:
               84-608
               

               Cow position:
               
               

               Alignm length:
               536
               

               Alignm identity:
               394
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 5
               

               Conread position:
               86-607
               

               Cow position:
               
               

               Alignm length:
               536
               

               Alignm identity:
               395
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 95
               

               Conread position:
               91-607
               

               Cow position:
               
               

               Alignm length:
               526
               

               Alignm identity:
               386
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 309
               

               Conread position:
               92-335
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               177
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               45, 19
               

               Conread position:
               92-524
               

               Cow position:
               
               

               Alignm length:
               440
               

               Alignm identity:
               327
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 19
               

               Conread position:
               92-560
               

               Cow position:
               
               

               Alignm length:
               490
               

               Alignm identity:
               342
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 70
               

               Conread position:
               92-607
               

               Cow position:
               
               

               Alignm length:
               529
               

               Alignm identity:
               395
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 311
               

               Conread position:
               93-605
               

               Cow position:
               
               

               Alignm length:
               535
               

               Alignm identity:
               362
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 61
               

               Conread position:
               94-602
               

               Cow position:
               
               

               Alignm length:
               515
               

               Alignm identity:
               385
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 68
               

               Conread position:
               94-605
               

               Cow position:
               
               

               Alignm length:
               528
               

               Alignm identity:
               374
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 221
               

               Conread position:
               95-359
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               197
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               38, 20
               

               Conread position:
               95-448
               

               Cow position:
               
               

               Alignm length:
               369
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 9
               

               Conread position:
               95-607
               

               Cow position:
               
               

               Alignm length:
               525
               

               Alignm identity:
               372
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 129
               

               Conread position:
               95-607
               

               Cow position:
               
               

               Alignm length:
               524
               

               Alignm identity:
               383
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 306
               

               Conread position:
               95-607
               

               Cow position:
               
               

               Alignm length:
               522
               

               Alignm identity:
               386
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 299
               

               Conread position:
               96-607
               

               Cow position:
               
               

               Alignm length:
               517
               

               Alignm identity:
               399
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 96
               

               Conread position:
               99-400
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               205
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               104-565
               

               Cow position:
               
               

               Alignm length:
               470
               

               Alignm identity:
               290
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               70, 32
               

               Conread position:
               106-385
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               200
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               25, 165
               

               Conread position:
               108-366
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               180
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               44, 50
               

               Conread position:
               111-602
               

               Cow position:
               
               

               Alignm length:
               495
               

               Alignm identity:
               356
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 79
               

               Conread position:
               111-607
               

               Cow position:
               
               

               Alignm length:
               509
               

               Alignm identity:
               369
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               225, 16
               

               Conread position:
               141-317
               

               Cow position:
               
               

               Alignm length:
               180
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               153, 0
               

               Conread position:
               161-307
               

               Cow position:
               
               

               Alignm length:
               152
               

               Alignm identity:
               130
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               44, 5
               

               Conread position:
               167-307
               

               Cow position:
               
               

               Alignm length:
               146
               

               Alignm identity:
               124
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               177-607
               

               Cow position:
               
               

               Alignm length:
               433
               

               Alignm identity:
               310
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               116, 32
               

               Conread position:
               192-368
               

               Cow position:
               
               

               Alignm length:
               179
               

               Alignm identity:
               128
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               101, 0
               

               Conread position:
               195-401
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               158
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               98, 0
               

               Conread position:
               225-421
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               156
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               66, 58
               

               Conread position:
               300-607
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               236
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 14
               

               Conread position:
               329-608
               

               Cow position:
               
               

               Alignm length:
               282
               

               Alignm identity:
               214
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 55
               

               Conread position:
               334-605
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               199
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               43, 220
               

               Conread position:
               336-607
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               206
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               125, 22
               

               Conread position:
               345-607
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               207
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               116, 46
               

               Conread position:
               354-607
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               209
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               107, 13
               

               Conread position:
               354-607
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               207
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               107, 13
               

               Conread position:
               358-602
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               178
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               23, 141
               

               Conread position:
               358-605
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               200
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               100, 33
               

               Conread position:
               358-607
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               197
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               103, 34
               

               Conread position:
               365-516
               

               Cow position:
               
               

               Alignm length:
               153
               

               Alignm identity:
               115
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               93, 27
               

               Conread position:
               367-584
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               173
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 25
               

               Conread position:
               385-593
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               148
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               15, 85
               
Show alignments to all cow chromosomes.