Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8047O02.5
        

               Conread position:
               1-88
               

               Cow position:
               
               

               Alignm length:
               88
               

               Alignm identity:
               76
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-88
               

               Cow position:
               
               

               Alignm length:
               88
               

               Alignm identity:
               76
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-88
               

               Cow position:
               
               

               Alignm length:
               88
               

               Alignm identity:
               76
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-88
               

               Cow position:
               
               

               Alignm length:
               88
               

               Alignm identity:
               76
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               72-607
               

               Cow position:
               
               

               Alignm length:
               545
               

               Alignm identity:
               388
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 21
               

               Conread position:
               74-597
               

               Cow position:
               
               

               Alignm length:
               536
               

               Alignm identity:
               337
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               40, 206
               

               Conread position:
               79-512
               

               Cow position:
               
               

               Alignm length:
               444
               

               Alignm identity:
               321
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 104
               

               Conread position:
               79-607
               

               Cow position:
               
               

               Alignm length:
               540
               

               Alignm identity:
               394
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 323
               

               Conread position:
               84-601
               

               Cow position:
               
               

               Alignm length:
               530
               

               Alignm identity:
               372
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 5
               

               Conread position:
               87-607
               

               Cow position:
               
               

               Alignm length:
               535
               

               Alignm identity:
               387
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 317
               

               Conread position:
               89-599
               

               Cow position:
               
               

               Alignm length:
               524
               

               Alignm identity:
               396
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 23
               

               Conread position:
               90-532
               

               Cow position:
               
               

               Alignm length:
               448
               

               Alignm identity:
               290
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               64, 51
               

               Conread position:
               91-509
               

               Cow position:
               
               

               Alignm length:
               426
               

               Alignm identity:
               271
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               36, 24
               

               Conread position:
               91-607
               

               Cow position:
               
               

               Alignm length:
               520
               

               Alignm identity:
               398
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 34
               

               Conread position:
               91-607
               

               Cow position:
               
               

               Alignm length:
               528
               

               Alignm identity:
               401
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 186
               

               Conread position:
               91-607
               

               Cow position:
               
               

               Alignm length:
               530
               

               Alignm identity:
               392
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 92
               

               Conread position:
               92-402
               

               Cow position:
               
               

               Alignm length:
               321
               

               Alignm identity:
               226
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               49, 79
               

               Conread position:
               92-607
               

               Cow position:
               
               

               Alignm length:
               525
               

               Alignm identity:
               384
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 97
               

               Conread position:
               92-607
               

               Cow position:
               
               

               Alignm length:
               529
               

               Alignm identity:
               387
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 306
               

               Conread position:
               93-607
               

               Cow position:
               
               

               Alignm length:
               524
               

               Alignm identity:
               384
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               97, 11
               

               Conread position:
               94-315
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               161
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               41, 21
               

               Conread position:
               94-466
               

               Cow position:
               
               

               Alignm length:
               385
               

               Alignm identity:
               260
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               44, 96
               

               Conread position:
               94-519
               

               Cow position:
               
               

               Alignm length:
               431
               

               Alignm identity:
               303
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 17
               

               Conread position:
               94-605
               

               Cow position:
               
               

               Alignm length:
               518
               

               Alignm identity:
               364
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 10
               

               Conread position:
               94-606
               

               Cow position:
               
               

               Alignm length:
               524
               

               Alignm identity:
               367
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 17
               

               Conread position:
               94-607
               

               Cow position:
               
               

               Alignm length:
               524
               

               Alignm identity:
               382
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 307
               

               Conread position:
               95-294
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               24, 9
               

               Conread position:
               95-351
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               183
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               36, 179
               

               Conread position:
               95-384
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               209
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               36, 67
               

               Conread position:
               95-509
               

               Cow position:
               
               

               Alignm length:
               423
               

               Alignm identity:
               303
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 81
               

               Conread position:
               95-602
               

               Cow position:
               
               

               Alignm length:
               517
               

               Alignm identity:
               379
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 68
               

               Conread position:
               95-607
               

               Cow position:
               
               

               Alignm length:
               517
               

               Alignm identity:
               375
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 256
               

               Conread position:
               95-607
               

               Cow position:
               
               

               Alignm length:
               525
               

               Alignm identity:
               386
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 306
               

               Conread position:
               95-607
               

               Cow position:
               
               

               Alignm length:
               525
               

               Alignm identity:
               383
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 67
               

               Conread position:
               95-607
               

               Cow position:
               
               

               Alignm length:
               522
               

               Alignm identity:
               371
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 95
               

               Conread position:
               95-607
               

               Cow position:
               
               

               Alignm length:
               525
               

               Alignm identity:
               376
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 87
               

               Conread position:
               95-607
               

               Cow position:
               
               

               Alignm length:
               525
               

               Alignm identity:
               372
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 67
               

               Conread position:
               95-607
               

               Cow position:
               
               

               Alignm length:
               517
               

               Alignm identity:
               384
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 95
               

               Conread position:
               95-607
               

               Cow position:
               
               

               Alignm length:
               524
               

               Alignm identity:
               385
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 306
               

               Conread position:
               95-607
               

               Cow position:
               
               

               Alignm length:
               523
               

               Alignm identity:
               383
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 300
               

               Conread position:
               95-608
               

               Cow position:
               
               

               Alignm length:
               524
               

               Alignm identity:
               381
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 64
               

               Conread position:
               96-585
               

               Cow position:
               
               

               Alignm length:
               511
               

               Alignm identity:
               355
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 83
               

               Conread position:
               96-607
               

               Cow position:
               
               

               Alignm length:
               523
               

               Alignm identity:
               380
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 66
               

               Conread position:
               96-607
               

               Cow position:
               
               

               Alignm length:
               523
               

               Alignm identity:
               384
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 86
               

               Conread position:
               96-607
               

               Cow position:
               
               

               Alignm length:
               534
               

               Alignm identity:
               378
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 70
               

               Conread position:
               97-447
               

               Cow position:
               
               

               Alignm length:
               356
               

               Alignm identity:
               248
               

               Alignm E-value:
               8.99634e-43
               

               Alignm gaps (pig, cow):
               43, 18
               

               Conread position:
               97-599
               

               Cow position:
               
               

               Alignm length:
               518
               

               Alignm identity:
               383
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 309
               

               Conread position:
               97-605
               

               Cow position:
               
               

               Alignm length:
               518
               

               Alignm identity:
               384
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 7
               

               Conread position:
               99-484
               

               Cow position:
               
               

               Alignm length:
               389
               

               Alignm identity:
               252
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               195, 20
               

               Conread position:
               99-593
               

               Cow position:
               
               

               Alignm length:
               511
               

               Alignm identity:
               381
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 16
               

               Conread position:
               99-607
               

               Cow position:
               
               

               Alignm length:
               515
               

               Alignm identity:
               359
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 114
               

               Conread position:
               100-324
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               168
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               31, 62
               

               Conread position:
               103-607
               

               Cow position:
               
               

               Alignm length:
               526
               

               Alignm identity:
               391
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 87
               

               Conread position:
               104-607
               

               Cow position:
               
               

               Alignm length:
               520
               

               Alignm identity:
               383
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 96
               

               Conread position:
               108-291
               

               Cow position:
               
               

               Alignm length:
               187
               

               Alignm identity:
               140
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               18, 70
               

               Conread position:
               111-413
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               223
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 81
               

               Conread position:
               111-607
               

               Cow position:
               
               

               Alignm length:
               508
               

               Alignm identity:
               377
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 124
               

               Conread position:
               115-605
               

               Cow position:
               
               

               Alignm length:
               496
               

               Alignm identity:
               320
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               22, 77
               

               Conread position:
               130-345
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               159
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               147, 0
               

               Conread position:
               130-493
               

               Cow position:
               
               

               Alignm length:
               371
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               163, 236
               

               Conread position:
               130-594
               

               Cow position:
               
               

               Alignm length:
               470
               

               Alignm identity:
               337
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 30
               

               Conread position:
               130-607
               

               Cow position:
               
               

               Alignm length:
               487
               

               Alignm identity:
               363
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               163, 142
               

               Conread position:
               136-607
               

               Cow position:
               
               

               Alignm length:
               482
               

               Alignm identity:
               354
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 24
               

               Conread position:
               146-310
               

               Cow position:
               
               

               Alignm length:
               167
               

               Alignm identity:
               125
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               144, 0
               

               Conread position:
               151-607
               

               Cow position:
               
               

               Alignm length:
               466
               

               Alignm identity:
               352
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 62
               

               Conread position:
               166-379
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               156
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               24, 35
               

               Conread position:
               168-607
               

               Cow position:
               
               

               Alignm length:
               449
               

               Alignm identity:
               332
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               123, 20
               

               Conread position:
               178-578
               

               Cow position:
               
               

               Alignm length:
               411
               

               Alignm identity:
               257
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               78, 9
               

               Conread position:
               181-607
               

               Cow position:
               
               

               Alignm length:
               436
               

               Alignm identity:
               319
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               112, 218
               

               Conread position:
               185-602
               

               Cow position:
               
               

               Alignm length:
               424
               

               Alignm identity:
               264
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               21, 28
               

               Conread position:
               185-611
               

               Cow position:
               
               

               Alignm length:
               434
               

               Alignm identity:
               316
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               179, 87
               

               Conread position:
               190-584
               

               Cow position:
               
               

               Alignm length:
               400
               

               Alignm identity:
               255
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               174, 17
               

               Conread position:
               193-564
               

               Cow position:
               
               

               Alignm length:
               379
               

               Alignm identity:
               237
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               82, 65
               

               Conread position:
               194-589
               

               Cow position:
               
               

               Alignm length:
               406
               

               Alignm identity:
               267
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               143, 5
               

               Conread position:
               194-605
               

               Cow position:
               
               

               Alignm length:
               413
               

               Alignm identity:
               292
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               265, 95
               

               Conread position:
               195-465
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               191
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               30, 92
               

               Conread position:
               195-570
               

               Cow position:
               
               

               Alignm length:
               382
               

               Alignm identity:
               241
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               75, 65
               

               Conread position:
               202-585
               

               Cow position:
               
               

               Alignm length:
               388
               

               Alignm identity:
               292
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               162, 17
               

               Conread position:
               215-607
               

               Cow position:
               
               

               Alignm length:
               418
               

               Alignm identity:
               311
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 78
               

               Conread position:
               237-607
               

               Cow position:
               
               

               Alignm length:
               379
               

               Alignm identity:
               288
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               127, 164
               

               Conread position:
               255-445
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               38, 139
               

               Conread position:
               255-607
               

               Cow position:
               
               

               Alignm length:
               362
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 145
               

               Conread position:
               326-607
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               217
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 13
               

               Conread position:
               345-607
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               204
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 47
               

               Conread position:
               358-607
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               195
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               103, 33
               

               Conread position:
               358-607
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               188
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               100, 33
               

               Conread position:
               380-602
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               168
               

               Alignm E-value:
               7.00005e-41
               

               Alignm gaps (pig, cow):
               81, 11
               

               Conread position:
               387-604
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               179
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               388-607
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               180
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               399-593
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               138
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               59, 6
               

               Conread position:
               400-593
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               150
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               58, 178
               

               Conread position:
               421-602
               

               Cow position:
               
               

               Alignm length:
               186
               

               Alignm identity:
               130
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               5, 0
               

               Conread position:
               432-607
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               139
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               441-602
               

               Cow position:
               
               

               Alignm length:
               162
               

               Alignm identity:
               121
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               459-607
               

               Cow position:
               
               

               Alignm length:
               149
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               460-607
               

               Cow position:
               
               

               Alignm length:
               148
               

               Alignm identity:
               121
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               485-607
               

               Cow position:
               
               

               Alignm length:
               123
               

               Alignm identity:
               96
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               487-607
               

               Cow position:
               
               

               Alignm length:
               121
               

               Alignm identity:
               98
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               0, 0
               
Show alignments to all cow chromosomes.