Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8047O02.5
        

               Conread position:
               1-88
               

               Cow position:
               
               

               Alignm length:
               88
               

               Alignm identity:
               76
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-88
               

               Cow position:
               
               

               Alignm length:
               88
               

               Alignm identity:
               76
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-88
               

               Cow position:
               
               

               Alignm length:
               88
               

               Alignm identity:
               76
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-88
               

               Cow position:
               
               

               Alignm length:
               88
               

               Alignm identity:
               76
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               3-89
               

               Cow position:
               
               

               Alignm length:
               87
               

               Alignm identity:
               77
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               79-500
               

               Cow position:
               
               

               Alignm length:
               434
               

               Alignm identity:
               312
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 324
               

               Conread position:
               79-538
               

               Cow position:
               
               

               Alignm length:
               471
               

               Alignm identity:
               330
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 146
               

               Conread position:
               79-607
               

               Cow position:
               
               

               Alignm length:
               540
               

               Alignm identity:
               393
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 111
               

               Conread position:
               81-366
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               195
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               212, 5
               

               Conread position:
               84-401
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               216
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               53, 109
               

               Conread position:
               84-466
               

               Cow position:
               
               

               Alignm length:
               396
               

               Alignm identity:
               285
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 5
               

               Conread position:
               90-329
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               175
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               141, 37
               

               Conread position:
               91-368
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               205
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               20, 110
               

               Conread position:
               91-607
               

               Cow position:
               
               

               Alignm length:
               524
               

               Alignm identity:
               391
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 20
               

               Conread position:
               91-607
               

               Cow position:
               
               

               Alignm length:
               530
               

               Alignm identity:
               393
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 188
               

               Conread position:
               91-607
               

               Cow position:
               
               

               Alignm length:
               533
               

               Alignm identity:
               387
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 101
               

               Conread position:
               92-563
               

               Cow position:
               
               

               Alignm length:
               489
               

               Alignm identity:
               352
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 12
               

               Conread position:
               92-607
               

               Cow position:
               
               

               Alignm length:
               531
               

               Alignm identity:
               378
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 7
               

               Conread position:
               93-317
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               156
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               18, 86
               

               Conread position:
               93-607
               

               Cow position:
               
               

               Alignm length:
               520
               

               Alignm identity:
               401
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 82
               

               Conread position:
               93-607
               

               Cow position:
               
               

               Alignm length:
               526
               

               Alignm identity:
               373
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 18
               

               Conread position:
               94-366
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               189
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               199, 48
               

               Conread position:
               94-488
               

               Cow position:
               
               

               Alignm length:
               408
               

               Alignm identity:
               297
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 9
               

               Conread position:
               94-510
               

               Cow position:
               
               

               Alignm length:
               431
               

               Alignm identity:
               315
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 311
               

               Conread position:
               94-544
               

               Cow position:
               
               

               Alignm length:
               465
               

               Alignm identity:
               339
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 85
               

               Conread position:
               94-548
               

               Cow position:
               
               

               Alignm length:
               465
               

               Alignm identity:
               345
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 68
               

               Conread position:
               94-584
               

               Cow position:
               
               

               Alignm length:
               502
               

               Alignm identity:
               362
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 308
               

               Conread position:
               94-607
               

               Cow position:
               
               

               Alignm length:
               525
               

               Alignm identity:
               377
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 107
               

               Conread position:
               94-607
               

               Cow position:
               
               

               Alignm length:
               532
               

               Alignm identity:
               378
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 17
               

               Conread position:
               94-607
               

               Cow position:
               
               

               Alignm length:
               525
               

               Alignm identity:
               382
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 17
               

               Conread position:
               95-602
               

               Cow position:
               
               

               Alignm length:
               513
               

               Alignm identity:
               372
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               126, 34
               

               Conread position:
               95-606
               

               Cow position:
               
               

               Alignm length:
               521
               

               Alignm identity:
               373
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 95
               

               Conread position:
               95-607
               

               Cow position:
               
               

               Alignm length:
               521
               

               Alignm identity:
               374
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 298
               

               Conread position:
               95-607
               

               Cow position:
               
               

               Alignm length:
               525
               

               Alignm identity:
               382
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 307
               

               Conread position:
               95-607
               

               Cow position:
               
               

               Alignm length:
               523
               

               Alignm identity:
               383
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 104
               

               Conread position:
               95-607
               

               Cow position:
               
               

               Alignm length:
               525
               

               Alignm identity:
               378
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 95
               

               Conread position:
               95-607
               

               Cow position:
               
               

               Alignm length:
               516
               

               Alignm identity:
               374
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               198, 288
               

               Conread position:
               95-607
               

               Cow position:
               
               

               Alignm length:
               524
               

               Alignm identity:
               378
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 306
               

               Conread position:
               95-607
               

               Cow position:
               
               

               Alignm length:
               525
               

               Alignm identity:
               388
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 76
               

               Conread position:
               95-607
               

               Cow position:
               
               

               Alignm length:
               528
               

               Alignm identity:
               386
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 223
               

               Conread position:
               95-607
               

               Cow position:
               
               

               Alignm length:
               524
               

               Alignm identity:
               376
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 300
               

               Conread position:
               95-607
               

               Cow position:
               
               

               Alignm length:
               524
               

               Alignm identity:
               384
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 108
               

               Conread position:
               95-607
               

               Cow position:
               
               

               Alignm length:
               524
               

               Alignm identity:
               378
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 16
               

               Conread position:
               95-607
               

               Cow position:
               
               

               Alignm length:
               525
               

               Alignm identity:
               372
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 49
               

               Conread position:
               95-607
               

               Cow position:
               
               

               Alignm length:
               528
               

               Alignm identity:
               372
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 67
               

               Conread position:
               95-607
               

               Cow position:
               
               

               Alignm length:
               522
               

               Alignm identity:
               377
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 304
               

               Conread position:
               95-607
               

               Cow position:
               
               

               Alignm length:
               524
               

               Alignm identity:
               382
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 306
               

               Conread position:
               95-610
               

               Cow position:
               
               

               Alignm length:
               525
               

               Alignm identity:
               351
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               38, 20
               

               Conread position:
               96-397
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               228
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 68
               

               Conread position:
               96-607
               

               Cow position:
               
               

               Alignm length:
               523
               

               Alignm identity:
               378
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 68
               

               Conread position:
               96-607
               

               Cow position:
               
               

               Alignm length:
               523
               

               Alignm identity:
               381
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 39
               

               Conread position:
               96-607
               

               Cow position:
               
               

               Alignm length:
               524
               

               Alignm identity:
               386
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 15
               

               Conread position:
               96-607
               

               Cow position:
               
               

               Alignm length:
               519
               

               Alignm identity:
               376
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 302
               

               Conread position:
               97-602
               

               Cow position:
               
               

               Alignm length:
               516
               

               Alignm identity:
               385
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 95
               

               Conread position:
               97-605
               

               Cow position:
               
               

               Alignm length:
               515
               

               Alignm identity:
               366
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 93
               

               Conread position:
               97-607
               

               Cow position:
               
               

               Alignm length:
               546
               

               Alignm identity:
               408
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 313
               

               Conread position:
               97-607
               

               Cow position:
               
               

               Alignm length:
               518
               

               Alignm identity:
               380
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 178
               

               Conread position:
               98-439
               

               Cow position:
               
               

               Alignm length:
               347
               

               Alignm identity:
               233
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               53, 62
               

               Conread position:
               98-583
               

               Cow position:
               
               

               Alignm length:
               495
               

               Alignm identity:
               374
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 24
               

               Conread position:
               98-605
               

               Cow position:
               
               

               Alignm length:
               515
               

               Alignm identity:
               393
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 96
               

               Conread position:
               101-602
               

               Cow position:
               
               

               Alignm length:
               512
               

               Alignm identity:
               367
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 86
               

               Conread position:
               103-502
               

               Cow position:
               
               

               Alignm length:
               404
               

               Alignm identity:
               264
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               39, 91
               

               Conread position:
               103-607
               

               Cow position:
               
               

               Alignm length:
               525
               

               Alignm identity:
               392
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 61
               

               Conread position:
               111-608
               

               Cow position:
               
               

               Alignm length:
               504
               

               Alignm identity:
               346
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               176, 13
               

               Conread position:
               111-608
               

               Cow position:
               
               

               Alignm length:
               504
               

               Alignm identity:
               346
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               176, 13
               

               Conread position:
               115-525
               

               Cow position:
               
               

               Alignm length:
               414
               

               Alignm identity:
               272
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               179, 27
               

               Conread position:
               115-584
               

               Cow position:
               
               

               Alignm length:
               489
               

               Alignm identity:
               306
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               22, 92
               

               Conread position:
               131-645
               

               Cow position:
               
               

               Alignm length:
               523
               

               Alignm identity:
               358
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 187
               

               Conread position:
               133-546
               

               Cow position:
               
               

               Alignm length:
               434
               

               Alignm identity:
               278
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               143, 42
               

               Conread position:
               136-605
               

               Cow position:
               
               

               Alignm length:
               478
               

               Alignm identity:
               373
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 24
               

               Conread position:
               146-605
               

               Cow position:
               
               

               Alignm length:
               476
               

               Alignm identity:
               307
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               147, 77
               

               Conread position:
               150-605
               

               Cow position:
               
               

               Alignm length:
               461
               

               Alignm identity:
               305
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               61, 47
               

               Conread position:
               159-529
               

               Cow position:
               
               

               Alignm length:
               384
               

               Alignm identity:
               255
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               60, 25
               

               Conread position:
               184-607
               

               Cow position:
               
               

               Alignm length:
               433
               

               Alignm identity:
               321
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               109, 7
               

               Conread position:
               209-605
               

               Cow position:
               
               

               Alignm length:
               406
               

               Alignm identity:
               304
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 191
               

               Conread position:
               236-470
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               185
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               124, 156
               

               Conread position:
               236-584
               

               Cow position:
               
               

               Alignm length:
               356
               

               Alignm identity:
               241
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               127, 22
               

               Conread position:
               244-407
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               127
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               49, 155
               

               Conread position:
               244-607
               

               Cow position:
               
               

               Alignm length:
               372
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 155
               

               Conread position:
               258-563
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               204
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               35, 130
               

               Conread position:
               259-607
               

               Cow position:
               
               

               Alignm length:
               358
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 141
               

               Conread position:
               259-607
               

               Cow position:
               
               

               Alignm length:
               352
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 92
               

               Conread position:
               293-607
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               240
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 105
               

               Conread position:
               303-607
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               228
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 96
               

               Conread position:
               303-607
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               230
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 96
               

               Conread position:
               325-616
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               191
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               37, 83
               

               Conread position:
               336-607
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               211
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 56
               

               Conread position:
               353-581
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               183
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               105, 18
               

               Conread position:
               358-607
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               191
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               103, 33
               

               Conread position:
               358-608
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               177
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               24, 6
               

               Conread position:
               361-607
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               192
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               100, 30
               

               Conread position:
               415-605
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               150
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               460-607
               

               Cow position:
               
               

               Alignm length:
               148
               

               Alignm identity:
               111
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               476-596
               

               Cow position:
               
               

               Alignm length:
               121
               

               Alignm identity:
               103
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               0, 0
               
Show alignments to all cow chromosomes.