Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8047O02.5
        

               Conread position:
               1-88
               

               Cow position:
               
               

               Alignm length:
               88
               

               Alignm identity:
               76
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-88
               

               Cow position:
               
               

               Alignm length:
               88
               

               Alignm identity:
               76
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-88
               

               Cow position:
               
               

               Alignm length:
               88
               

               Alignm identity:
               77
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-88
               

               Cow position:
               
               

               Alignm length:
               88
               

               Alignm identity:
               76
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-88
               

               Cow position:
               
               

               Alignm length:
               88
               

               Alignm identity:
               76
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               79-284
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               147
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               79-366
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               203
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               79-607
               

               Cow position:
               
               

               Alignm length:
               541
               

               Alignm identity:
               396
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 324
               

               Conread position:
               79-607
               

               Cow position:
               
               

               Alignm length:
               540
               

               Alignm identity:
               394
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 323
               

               Conread position:
               84-557
               

               Cow position:
               
               

               Alignm length:
               495
               

               Alignm identity:
               305
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               35, 131
               

               Conread position:
               84-605
               

               Cow position:
               
               

               Alignm length:
               533
               

               Alignm identity:
               397
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 5
               

               Conread position:
               84-605
               

               Cow position:
               
               

               Alignm length:
               531
               

               Alignm identity:
               350
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 129
               

               Conread position:
               84-607
               

               Cow position:
               
               

               Alignm length:
               530
               

               Alignm identity:
               385
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 5
               

               Conread position:
               87-604
               

               Cow position:
               
               

               Alignm length:
               524
               

               Alignm identity:
               337
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 11
               

               Conread position:
               88-607
               

               Cow position:
               
               

               Alignm length:
               533
               

               Alignm identity:
               390
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 108
               

               Conread position:
               91-596
               

               Cow position:
               
               

               Alignm length:
               510
               

               Alignm identity:
               326
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               46, 116
               

               Conread position:
               91-607
               

               Cow position:
               
               

               Alignm length:
               532
               

               Alignm identity:
               382
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 313
               

               Conread position:
               91-609
               

               Cow position:
               
               

               Alignm length:
               527
               

               Alignm identity:
               387
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 53
               

               Conread position:
               92-316
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               172
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               92-607
               

               Cow position:
               
               

               Alignm length:
               533
               

               Alignm identity:
               397
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               5, 86
               

               Conread position:
               92-608
               

               Cow position:
               
               

               Alignm length:
               525
               

               Alignm identity:
               398
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 239
               

               Conread position:
               94-577
               

               Cow position:
               
               

               Alignm length:
               495
               

               Alignm identity:
               362
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 308
               

               Conread position:
               94-601
               

               Cow position:
               
               

               Alignm length:
               515
               

               Alignm identity:
               378
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 17
               

               Conread position:
               94-605
               

               Cow position:
               
               

               Alignm length:
               528
               

               Alignm identity:
               366
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 10
               

               Conread position:
               94-607
               

               Cow position:
               
               

               Alignm length:
               521
               

               Alignm identity:
               383
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 304
               

               Conread position:
               94-607
               

               Cow position:
               
               

               Alignm length:
               525
               

               Alignm identity:
               388
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 96
               

               Conread position:
               94-607
               

               Cow position:
               
               

               Alignm length:
               525
               

               Alignm identity:
               385
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 170
               

               Conread position:
               94-607
               

               Cow position:
               
               

               Alignm length:
               539
               

               Alignm identity:
               396
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 307
               

               Conread position:
               94-607
               

               Cow position:
               
               

               Alignm length:
               526
               

               Alignm identity:
               383
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 97
               

               Conread position:
               94-607
               

               Cow position:
               
               

               Alignm length:
               525
               

               Alignm identity:
               385
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 308
               

               Conread position:
               94-607
               

               Cow position:
               
               

               Alignm length:
               527
               

               Alignm identity:
               392
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 224
               

               Conread position:
               95-400
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               220
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               36, 302
               

               Conread position:
               95-519
               

               Cow position:
               
               

               Alignm length:
               436
               

               Alignm identity:
               311
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 307
               

               Conread position:
               95-595
               

               Cow position:
               
               

               Alignm length:
               513
               

               Alignm identity:
               376
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 301
               

               Conread position:
               95-606
               

               Cow position:
               
               

               Alignm length:
               518
               

               Alignm identity:
               381
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 257
               

               Conread position:
               95-607
               

               Cow position:
               
               

               Alignm length:
               524
               

               Alignm identity:
               386
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 104
               

               Conread position:
               95-607
               

               Cow position:
               
               

               Alignm length:
               516
               

               Alignm identity:
               369
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 256
               

               Conread position:
               95-607
               

               Cow position:
               
               

               Alignm length:
               524
               

               Alignm identity:
               376
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 301
               

               Conread position:
               95-607
               

               Cow position:
               
               

               Alignm length:
               521
               

               Alignm identity:
               371
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 98
               

               Conread position:
               95-607
               

               Cow position:
               
               

               Alignm length:
               524
               

               Alignm identity:
               378
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 88
               

               Conread position:
               95-607
               

               Cow position:
               
               

               Alignm length:
               524
               

               Alignm identity:
               381
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 306
               

               Conread position:
               95-607
               

               Cow position:
               
               

               Alignm length:
               522
               

               Alignm identity:
               375
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 303
               

               Conread position:
               95-607
               

               Cow position:
               
               

               Alignm length:
               525
               

               Alignm identity:
               386
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 306
               

               Conread position:
               95-607
               

               Cow position:
               
               

               Alignm length:
               524
               

               Alignm identity:
               381
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 9
               

               Conread position:
               95-607
               

               Cow position:
               
               

               Alignm length:
               525
               

               Alignm identity:
               379
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 9
               

               Conread position:
               95-607
               

               Cow position:
               
               

               Alignm length:
               526
               

               Alignm identity:
               379
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 67
               

               Conread position:
               95-624
               

               Cow position:
               
               

               Alignm length:
               541
               

               Alignm identity:
               355
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 301
               

               Conread position:
               96-370
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               207
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               96-430
               

               Cow position:
               
               

               Alignm length:
               345
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 104
               

               Conread position:
               96-484
               

               Cow position:
               
               

               Alignm length:
               400
               

               Alignm identity:
               284
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 91
               

               Conread position:
               96-607
               

               Cow position:
               
               

               Alignm length:
               525
               

               Alignm identity:
               387
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 97
               

               Conread position:
               96-607
               

               Cow position:
               
               

               Alignm length:
               527
               

               Alignm identity:
               387
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 70
               

               Conread position:
               96-607
               

               Cow position:
               
               

               Alignm length:
               522
               

               Alignm identity:
               374
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 87
               

               Conread position:
               96-607
               

               Cow position:
               
               

               Alignm length:
               519
               

               Alignm identity:
               380
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               192, 27
               

               Conread position:
               97-322
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               13, 90
               

               Conread position:
               97-563
               

               Cow position:
               
               

               Alignm length:
               473
               

               Alignm identity:
               325
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 18
               

               Conread position:
               97-607
               

               Cow position:
               
               

               Alignm length:
               522
               

               Alignm identity:
               380
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 123
               

               Conread position:
               97-607
               

               Cow position:
               
               

               Alignm length:
               521
               

               Alignm identity:
               407
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 64
               

               Conread position:
               98-346
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               182
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               39, 88
               

               Conread position:
               99-583
               

               Cow position:
               
               

               Alignm length:
               497
               

               Alignm identity:
               343
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 71
               

               Conread position:
               99-601
               

               Cow position:
               
               

               Alignm length:
               512
               

               Alignm identity:
               339
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 12
               

               Conread position:
               100-435
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               239
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 287
               

               Conread position:
               102-485
               

               Cow position:
               
               

               Alignm length:
               404
               

               Alignm identity:
               288
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 92
               

               Conread position:
               104-607
               

               Cow position:
               
               

               Alignm length:
               515
               

               Alignm identity:
               399
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 104
               

               Conread position:
               111-607
               

               Cow position:
               
               

               Alignm length:
               507
               

               Alignm identity:
               374
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 79
               

               Conread position:
               111-607
               

               Cow position:
               
               

               Alignm length:
               508
               

               Alignm identity:
               376
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 140
               

               Conread position:
               116-605
               

               Cow position:
               
               

               Alignm length:
               495
               

               Alignm identity:
               349
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 52
               

               Conread position:
               123-584
               

               Cow position:
               
               

               Alignm length:
               469
               

               Alignm identity:
               308
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               21, 93
               

               Conread position:
               127-360
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               173
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               92, 19
               

               Conread position:
               136-560
               

               Cow position:
               
               

               Alignm length:
               433
               

               Alignm identity:
               291
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 78
               

               Conread position:
               138-604
               

               Cow position:
               
               

               Alignm length:
               476
               

               Alignm identity:
               319
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 115
               

               Conread position:
               144-335
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               136
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               154-607
               

               Cow position:
               
               

               Alignm length:
               454
               

               Alignm identity:
               333
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               195, 0
               

               Conread position:
               159-585
               

               Cow position:
               
               

               Alignm length:
               439
               

               Alignm identity:
               336
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 244
               

               Conread position:
               172-513
               

               Cow position:
               
               

               Alignm length:
               348
               

               Alignm identity:
               244
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               18, 29
               

               Conread position:
               178-607
               

               Cow position:
               
               

               Alignm length:
               439
               

               Alignm identity:
               319
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               113, 221
               

               Conread position:
               179-503
               

               Cow position:
               
               

               Alignm length:
               330
               

               Alignm identity:
               214
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               11, 144
               

               Conread position:
               179-605
               

               Cow position:
               
               

               Alignm length:
               437
               

               Alignm identity:
               298
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 35
               

               Conread position:
               180-546
               

               Cow position:
               
               

               Alignm length:
               373
               

               Alignm identity:
               245
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               27, 155
               

               Conread position:
               184-607
               

               Cow position:
               
               

               Alignm length:
               429
               

               Alignm identity:
               316
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               107, 167
               

               Conread position:
               190-604
               

               Cow position:
               
               

               Alignm length:
               419
               

               Alignm identity:
               275
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               104, 78
               

               Conread position:
               190-608
               

               Cow position:
               
               

               Alignm length:
               428
               

               Alignm identity:
               274
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               95, 7
               

               Conread position:
               195-607
               

               Cow position:
               
               

               Alignm length:
               416
               

               Alignm identity:
               327
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               204, 71
               

               Conread position:
               198-608
               

               Cow position:
               
               

               Alignm length:
               417
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 173
               

               Conread position:
               199-607
               

               Cow position:
               
               

               Alignm length:
               419
               

               Alignm identity:
               312
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 201
               

               Conread position:
               230-503
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               189
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               64, 90
               

               Conread position:
               258-606
               

               Cow position:
               
               

               Alignm length:
               359
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 142
               

               Conread position:
               258-607
               

               Cow position:
               
               

               Alignm length:
               355
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 138
               

               Conread position:
               286-553
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               195
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               26, 15
               

               Conread position:
               299-608
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               205
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               22, 27
               

               Conread position:
               311-557
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               177
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               26, 85
               

               Conread position:
               358-607
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               195
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               101, 33
               

               Conread position:
               359-607
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               198
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               102, 33
               

               Conread position:
               364-605
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               192
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 31
               

               Conread position:
               411-574
               

               Cow position:
               
               

               Alignm length:
               168
               

               Alignm identity:
               128
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               417-607
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               147
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               421-599
               

               Cow position:
               
               

               Alignm length:
               181
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               9, 142
               

               Conread position:
               462-607
               

               Cow position:
               
               

               Alignm length:
               147
               

               Alignm identity:
               113
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               102, 54
               

               Conread position:
               464-607
               

               Cow position:
               
               

               Alignm length:
               144
               

               Alignm identity:
               112
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               495-607
               

               Cow position:
               
               

               Alignm length:
               114
               

               Alignm identity:
               90
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               495-607
               

               Cow position:
               
               

               Alignm length:
               114
               

               Alignm identity:
               92
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               20, 0
               
Show alignments to all cow chromosomes.