Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8047O02.5 |
| Conread position: | 1-85 |
| Cow position: | chr6:18513821-18513737 (view UCSC Genome Browser custom track) |
| Alignm length: | 85 |
| Alignm identity: | 75 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-88 |
| Cow position: | chr6:2446245-2446158 (view UCSC Genome Browser custom track) |
| Alignm length: | 88 |
| Alignm identity: | 76 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-88 |
| Cow position: | chr6:8537037-8537124 (view UCSC Genome Browser custom track) |
| Alignm length: | 88 |
| Alignm identity: | 76 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-88 |
| Cow position: | chr6:14133479-14133566 (view UCSC Genome Browser custom track) |
| Alignm length: | 88 |
| Alignm identity: | 76 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-88 |
| Cow position: | chr6:16021347-16021260 (view UCSC Genome Browser custom track) |
| Alignm length: | 88 |
| Alignm identity: | 76 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-88 |
| Cow position: | chr6:20088179-20088266 (view UCSC Genome Browser custom track) |
| Alignm length: | 88 |
| Alignm identity: | 76 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-88 |
| Cow position: | chr6:20351826-20351913 (view UCSC Genome Browser custom track) |
| Alignm length: | 88 |
| Alignm identity: | 76 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-88 |
| Cow position: | chr6:31913886-31913799 (view UCSC Genome Browser custom track) |
| Alignm length: | 88 |
| Alignm identity: | 76 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-88 |
| Cow position: | chr6:32002013-32002100 (view UCSC Genome Browser custom track) |
| Alignm length: | 88 |
| Alignm identity: | 76 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-88 |
| Cow position: | chr6:32633086-32632999 (view UCSC Genome Browser custom track) |
| Alignm length: | 88 |
| Alignm identity: | 76 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-88 |
| Cow position: | chr6:33809903-33809816 (view UCSC Genome Browser custom track) |
| Alignm length: | 88 |
| Alignm identity: | 76 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-88 |
| Cow position: | chr6:46479395-46479308 (view UCSC Genome Browser custom track) |
| Alignm length: | 88 |
| Alignm identity: | 76 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-88 |
| Cow position: | chr6:66388569-66388656 (view UCSC Genome Browser custom track) |
| Alignm length: | 88 |
| Alignm identity: | 76 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-88 |
| Cow position: | chr6:67212629-67212716 (view UCSC Genome Browser custom track) |
| Alignm length: | 88 |
| Alignm identity: | 79 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 81-607 |
| Cow position: | chr6:913276-913824 (view UCSC Genome Browser custom track) |
| Alignm length: | 553 |
| Alignm identity: | 395 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 111 |
| Conread position: | 81-607 |
| Cow position: | chr6:1405589-1405056 (view UCSC Genome Browser custom track) |
| Alignm length: | 536 |
| Alignm identity: | 393 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 5 |
| Conread position: | 84-345 |
| Cow position: | chr6:39907800-39908064 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 189 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 47, 5 |
| Conread position: | 84-607 |
| Cow position: | chr6:7141822-7141304 (view UCSC Genome Browser custom track) |
| Alignm length: | 536 |
| Alignm identity: | 380 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 5 |
| Conread position: | 84-607 |
| Cow position: | chr6:28062992-28063518 (view UCSC Genome Browser custom track) |
| Alignm length: | 535 |
| Alignm identity: | 396 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 5 |
| Conread position: | 86-607 |
| Cow position: | chr6:43617368-43617897 (view UCSC Genome Browser custom track) |
| Alignm length: | 533 |
| Alignm identity: | 395 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 315 |
| Conread position: | 87-604 |
| Cow position: | chr6:34024498-34024983 (view UCSC Genome Browser custom track) |
| Alignm length: | 524 |
| Alignm identity: | 337 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 193, 11 |
| Conread position: | 87-607 |
| Cow position: | chr6:65927591-65928118 (view UCSC Genome Browser custom track) |
| Alignm length: | 534 |
| Alignm identity: | 397 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 76 |
| Conread position: | 90-603 |
| Cow position: | chr6:16672047-16672558 (view UCSC Genome Browser custom track) |
| Alignm length: | 521 |
| Alignm identity: | 348 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 212, 33 |
| Conread position: | 91-366 |
| Cow position: | chr6:39437298-39437576 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 197 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 20, 111 |
| Conread position: | 91-413 |
| Cow position: | chr6:1823591-1823264 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 233 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 6, 100 |
| Conread position: | 91-554 |
| Cow position: | chr6:12093200-12092763 (view UCSC Genome Browser custom track) |
| Alignm length: | 469 |
| Alignm identity: | 321 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 25, 33 |
| Conread position: | 91-596 |
| Cow position: | chr6:44525098-44524597 (view UCSC Genome Browser custom track) |
| Alignm length: | 516 |
| Alignm identity: | 329 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 19, 157 |
| Conread position: | 91-605 |
| Cow position: | chr6:11278041-11277516 (view UCSC Genome Browser custom track) |
| Alignm length: | 534 |
| Alignm identity: | 372 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 101 |
| Conread position: | 91-607 |
| Cow position: | chr6:15280888-15280370 (view UCSC Genome Browser custom track) |
| Alignm length: | 526 |
| Alignm identity: | 387 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 8 |
| Conread position: | 91-607 |
| Cow position: | chr6:20561454-20560930 (view UCSC Genome Browser custom track) |
| Alignm length: | 526 |
| Alignm identity: | 371 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 86 |
| Conread position: | 91-607 |
| Cow position: | chr6:36525697-36526228 (view UCSC Genome Browser custom track) |
| Alignm length: | 533 |
| Alignm identity: | 389 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 307 |
| Conread position: | 91-607 |
| Cow position: | chr6:38231929-38232459 (view UCSC Genome Browser custom track) |
| Alignm length: | 537 |
| Alignm identity: | 392 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 400 |
| Conread position: | 92-345 |
| Cow position: | chr6:45671922-45672179 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 189 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 92-354 |
| Cow position: | chr6:65007500-65007758 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 186 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 27, 103 |
| Conread position: | 92-396 |
| Cow position: | chr6:65909084-65909388 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 215 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 37, 226 |
| Conread position: | 92-598 |
| Cow position: | chr6:42927043-42927555 (view UCSC Genome Browser custom track) |
| Alignm length: | 517 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 103 |
| Conread position: | 92-607 |
| Cow position: | chr6:17598619-17598097 (view UCSC Genome Browser custom track) |
| Alignm length: | 527 |
| Alignm identity: | 391 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 98 |
| Conread position: | 92-607 |
| Cow position: | chr6:26671203-26670676 (view UCSC Genome Browser custom track) |
| Alignm length: | 532 |
| Alignm identity: | 390 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 98 |
| Conread position: | 93-607 |
| Cow position: | chr6:7180013-7179512 (view UCSC Genome Browser custom track) |
| Alignm length: | 525 |
| Alignm identity: | 364 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 90 |
| Conread position: | 94-312 |
| Cow position: | chr6:40274918-40275140 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 94-373 |
| Cow position: | chr6:13978182-13978462 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 202 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 232 |
| Conread position: | 94-427 |
| Cow position: | chr6:42564605-42564935 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 221 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 50, 9 |
| Conread position: | 94-435 |
| Cow position: | chr6:1384182-1383844 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 237 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 41, 21 |
| Conread position: | 94-581 |
| Cow position: | chr6:57870344-57869847 (view UCSC Genome Browser custom track) |
| Alignm length: | 500 |
| Alignm identity: | 377 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 224 |
| Conread position: | 94-584 |
| Cow position: | chr6:701613-702114 (view UCSC Genome Browser custom track) |
| Alignm length: | 503 |
| Alignm identity: | 356 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 309 |
| Conread position: | 94-607 |
| Cow position: | chr6:2554367-2554888 (view UCSC Genome Browser custom track) |
| Alignm length: | 525 |
| Alignm identity: | 383 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 308 |
| Conread position: | 94-607 |
| Cow position: | chr6:6566273-6566787 (view UCSC Genome Browser custom track) |
| Alignm length: | 519 |
| Alignm identity: | 373 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 17 |
| Conread position: | 94-607 |
| Cow position: | chr6:13103718-13104240 (view UCSC Genome Browser custom track) |
| Alignm length: | 525 |
| Alignm identity: | 387 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 144 |
| Conread position: | 94-607 |
| Cow position: | chr6:13943573-13944091 (view UCSC Genome Browser custom track) |
| Alignm length: | 524 |
| Alignm identity: | 375 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 96 |
| Conread position: | 94-607 |
| Cow position: | chr6:27169236-27169763 (view UCSC Genome Browser custom track) |
| Alignm length: | 531 |
| Alignm identity: | 393 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 91 |
| Conread position: | 94-607 |
| Cow position: | chr6:28491854-28491332 (view UCSC Genome Browser custom track) |
| Alignm length: | 525 |
| Alignm identity: | 374 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 308 |
| Conread position: | 94-607 |
| Cow position: | chr6:34127011-34127535 (view UCSC Genome Browser custom track) |
| Alignm length: | 529 |
| Alignm identity: | 385 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 131 |
| Conread position: | 94-607 |
| Cow position: | chr6:44028710-44029225 (view UCSC Genome Browser custom track) |
| Alignm length: | 520 |
| Alignm identity: | 369 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 96 |
| Conread position: | 94-607 |
| Cow position: | chr6:44150897-44150374 (view UCSC Genome Browser custom track) |
| Alignm length: | 526 |
| Alignm identity: | 381 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 17 |
| Conread position: | 94-607 |
| Cow position: | chr6:58409250-58408730 (view UCSC Genome Browser custom track) |
| Alignm length: | 525 |
| Alignm identity: | 385 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 131 |
| Conread position: | 94-607 |
| Cow position: | chr6:65822467-65821944 (view UCSC Genome Browser custom track) |
| Alignm length: | 525 |
| Alignm identity: | 383 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 308 |
| Conread position: | 94-607 |
| Cow position: | chr6:68026441-68026974 (view UCSC Genome Browser custom track) |
| Alignm length: | 537 |
| Alignm identity: | 396 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 108 |
| Conread position: | 94-611 |
| Cow position: | chr6:33388496-33389024 (view UCSC Genome Browser custom track) |
| Alignm length: | 533 |
| Alignm identity: | 390 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 92 |
| Conread position: | 95-359 |
| Cow position: | chr6:40314562-40314830 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 194 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 15, 127 |
| Conread position: | 95-366 |
| Cow position: | chr6:10054274-10054548 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 209 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 122 |
| Conread position: | 95-366 |
| Cow position: | chr6:21686556-21686823 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 193 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 38, 97 |
| Conread position: | 95-376 |
| Cow position: | chr6:47043771-47043485 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 204 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 95-514 |
| Cow position: | chr6:42723259-42722836 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 56 |
| Conread position: | 95-599 |
| Cow position: | chr6:34893349-34892832 (view UCSC Genome Browser custom track) |
| Alignm length: | 524 |
| Alignm identity: | 385 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 65 |
| Conread position: | 95-605 |
| Cow position: | chr6:27468919-27469428 (view UCSC Genome Browser custom track) |
| Alignm length: | 522 |
| Alignm identity: | 378 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 95 |
| Conread position: | 95-607 |
| Cow position: | chr6:3278290-3277768 (view UCSC Genome Browser custom track) |
| Alignm length: | 525 |
| Alignm identity: | 381 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 9 |
| Conread position: | 95-607 |
| Cow position: | chr6:3889826-3889297 (view UCSC Genome Browser custom track) |
| Alignm length: | 531 |
| Alignm identity: | 385 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 314 |
| Conread position: | 95-607 |
| Cow position: | chr6:5951576-5951064 (view UCSC Genome Browser custom track) |
| Alignm length: | 519 |
| Alignm identity: | 378 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 301 |
| Conread position: | 95-607 |
| Cow position: | chr6:8201393-8201919 (view UCSC Genome Browser custom track) |
| Alignm length: | 529 |
| Alignm identity: | 375 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 182 |
| Conread position: | 95-607 |
| Cow position: | chr6:15141514-15140998 (view UCSC Genome Browser custom track) |
| Alignm length: | 520 |
| Alignm identity: | 386 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 100 |
| Conread position: | 95-607 |
| Cow position: | chr6:17045725-17046237 (view UCSC Genome Browser custom track) |
| Alignm length: | 524 |
| Alignm identity: | 373 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 95 |
| Conread position: | 95-607 |
| Cow position: | chr6:24238708-24239247 (view UCSC Genome Browser custom track) |
| Alignm length: | 541 |
| Alignm identity: | 383 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 317 |
| Conread position: | 95-607 |
| Cow position: | chr6:27530338-27529825 (view UCSC Genome Browser custom track) |
| Alignm length: | 524 |
| Alignm identity: | 379 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 95 |
| Conread position: | 95-607 |
| Cow position: | chr6:28274649-28275164 (view UCSC Genome Browser custom track) |
| Alignm length: | 523 |
| Alignm identity: | 366 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 73 |
| Conread position: | 95-607 |
| Cow position: | chr6:29311156-29311673 (view UCSC Genome Browser custom track) |
| Alignm length: | 524 |
| Alignm identity: | 372 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 87 |
| Conread position: | 95-607 |
| Cow position: | chr6:65880527-65881049 (view UCSC Genome Browser custom track) |
| Alignm length: | 524 |
| Alignm identity: | 376 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 306 |
| Conread position: | 95-607 |
| Cow position: | chr6:65900249-65899721 (view UCSC Genome Browser custom track) |
| Alignm length: | 541 |
| Alignm identity: | 366 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 83 |
| Conread position: | 95-607 |
| Cow position: | chr6:66231476-66231977 (view UCSC Genome Browser custom track) |
| Alignm length: | 520 |
| Alignm identity: | 349 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 9 |
| Conread position: | 95-612 |
| Cow position: | chr6:21971334-21971873 (view UCSC Genome Browser custom track) |
| Alignm length: | 541 |
| Alignm identity: | 380 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 301 |
| Conread position: | 96-607 |
| Cow position: | chr6:331802-331287 (view UCSC Genome Browser custom track) |
| Alignm length: | 523 |
| Alignm identity: | 385 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 15 |
| Conread position: | 96-607 |
| Cow position: | chr6:2374369-2374882 (view UCSC Genome Browser custom track) |
| Alignm length: | 519 |
| Alignm identity: | 391 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 8 |
| Conread position: | 96-607 |
| Cow position: | chr6:35877059-35876536 (view UCSC Genome Browser custom track) |
| Alignm length: | 528 |
| Alignm identity: | 377 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 70 |
| Conread position: | 96-607 |
| Cow position: | chr6:37115799-37116317 (view UCSC Genome Browser custom track) |
| Alignm length: | 525 |
| Alignm identity: | 398 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 66 |
| Conread position: | 97-489 |
| Cow position: | chr6:6619750-6619376 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 261 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 264, 23 |
| Conread position: | 97-496 |
| Cow position: | chr6:68362652-68362251 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 67 |
| Conread position: | 97-601 |
| Cow position: | chr6:19453591-19454091 (view UCSC Genome Browser custom track) |
| Alignm length: | 517 |
| Alignm identity: | 392 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 89 |
| Conread position: | 97-607 |
| Cow position: | chr6:59919617-59919103 (view UCSC Genome Browser custom track) |
| Alignm length: | 524 |
| Alignm identity: | 389 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 66 |
| Conread position: | 99-607 |
| Cow position: | chr6:6476789-6476307 (view UCSC Genome Browser custom track) |
| Alignm length: | 514 |
| Alignm identity: | 380 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 62 |
| Conread position: | 99-607 |
| Cow position: | chr6:40554918-40554405 (view UCSC Genome Browser custom track) |
| Alignm length: | 528 |
| Alignm identity: | 367 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 16 |
| Conread position: | 100-602 |
| Cow position: | chr6:30478760-30479276 (view UCSC Genome Browser custom track) |
| Alignm length: | 524 |
| Alignm identity: | 382 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 93 |
| Conread position: | 101-607 |
| Cow position: | chr6:35420905-35420425 (view UCSC Genome Browser custom track) |
| Alignm length: | 512 |
| Alignm identity: | 379 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 79 |
| Conread position: | 103-348 |
| Cow position: | chr6:52804080-52804325 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 11, 138 |
| Conread position: | 103-463 |
| Cow position: | chr6:2885891-2886246 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 86 |
| Conread position: | 103-607 |
| Cow position: | chr6:41552697-41553192 (view UCSC Genome Browser custom track) |
| Alignm length: | 514 |
| Alignm identity: | 358 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 83 |
| Conread position: | 104-260 |
| Cow position: | chr6:2401921-2402078 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 123 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 27, 58 |
| Conread position: | 104-487 |
| Cow position: | chr6:10640799-10641188 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 275 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 27, 59 |
| Conread position: | 105-458 |
| Cow position: | chr6:20496374-20496722 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 238 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 35, 101 |
| Conread position: | 109-605 |
| Cow position: | chr6:525920-526415 (view UCSC Genome Browser custom track) |
| Alignm length: | 503 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 59 |
| Conread position: | 111-605 |
| Cow position: | chr6:28474389-28474882 (view UCSC Genome Browser custom track) |
| Alignm length: | 506 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 25 |
| Conread position: | 111-607 |
| Cow position: | chr6:8761624-8761123 (view UCSC Genome Browser custom track) |
| Alignm length: | 504 |
| Alignm identity: | 361 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 281 |
| Conread position: | 111-607 |
| Cow position: | chr6:30275506-30274996 (view UCSC Genome Browser custom track) |
| Alignm length: | 512 |
| Alignm identity: | 368 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 288 |
| Conread position: | 111-607 |
| Cow position: | chr6:55544650-55544145 (view UCSC Genome Browser custom track) |
| Alignm length: | 507 |
| Alignm identity: | 372 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 289 |
| Conread position: | 111-607 |
| Cow position: | chr6:65841266-65841766 (view UCSC Genome Browser custom track) |
| Alignm length: | 513 |
| Alignm identity: | 360 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 295 |
| Conread position: | 112-605 |
| Cow position: | chr6:37642080-37642565 (view UCSC Genome Browser custom track) |
| Alignm length: | 505 |
| Alignm identity: | 348 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 20 |
| Conread position: | 116-367 |
| Cow position: | chr6:42359998-42359744 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 177 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 15, 44 |
| Conread position: | 118-602 |
| Cow position: | chr6:62396853-62397345 (view UCSC Genome Browser custom track) |
| Alignm length: | 503 |
| Alignm identity: | 323 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 19, 66 |
| Conread position: | 130-605 |
| Cow position: | chr6:59741351-59740878 (view UCSC Genome Browser custom track) |
| Alignm length: | 485 |
| Alignm identity: | 345 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 180, 60 |
| Conread position: | 130-607 |
| Cow position: | chr6:10558944-10558478 (view UCSC Genome Browser custom track) |
| Alignm length: | 485 |
| Alignm identity: | 357 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 234, 23 |
| Conread position: | 136-607 |
| Cow position: | chr6:3488697-3488217 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 341 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 155, 263 |
| Conread position: | 140-582 |
| Cow position: | chr6:13317776-13317332 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 153, 55 |
| Conread position: | 141-484 |
| Cow position: | chr6:11353444-11353800 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 237 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 156-595 |
| Cow position: | chr6:10630191-10630625 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 138, 13 |
| Conread position: | 159-291 |
| Cow position: | chr6:7866882-7867014 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 102 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 159-549 |
| Cow position: | chr6:49520664-49520256 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 135, 21 |
| Conread position: | 167-560 |
| Cow position: | chr6:39161942-39162320 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 265 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 127, 17 |
| Conread position: | 168-477 |
| Cow position: | chr6:50497723-50497406 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 123, 231 |
| Conread position: | 168-604 |
| Cow position: | chr6:35433281-35433709 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 37 |
| Conread position: | 170-604 |
| Cow position: | chr6:12528572-12529009 (view UCSC Genome Browser custom track) |
| Alignm length: | 447 |
| Alignm identity: | 283 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 13, 29 |
| Conread position: | 170-607 |
| Cow position: | chr6:1100848-1100405 (view UCSC Genome Browser custom track) |
| Alignm length: | 446 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 229 |
| Conread position: | 173-607 |
| Cow position: | chr6:13276543-13276982 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 120, 198 |
| Conread position: | 181-591 |
| Cow position: | chr6:17931871-17932279 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 275 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 9, 52 |
| Conread position: | 185-608 |
| Cow position: | chr6:60170595-60170183 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 268 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 277, 8 |
| Conread position: | 187-605 |
| Cow position: | chr6:15476037-15476467 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 106, 8 |
| Conread position: | 190-611 |
| Cow position: | chr6:48368152-48368561 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 174, 7 |
| Conread position: | 192-607 |
| Cow position: | chr6:16051646-16052062 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 101, 144 |
| Conread position: | 196-605 |
| Cow position: | chr6:33459627-33460043 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 203 |
| Conread position: | 204-605 |
| Cow position: | chr6:13846819-13847212 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 151 |
| Conread position: | 206-339 |
| Cow position: | chr6:28588638-28588503 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 102 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 218-589 |
| Cow position: | chr6:32330992-32330626 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 140, 51 |
| Conread position: | 218-605 |
| Cow position: | chr6:11402838-11403224 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 261 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 75, 83 |
| Conread position: | 223-471 |
| Cow position: | chr6:8019870-8020121 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 184 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 70, 39 |
| Conread position: | 233-585 |
| Cow position: | chr6:43793957-43793608 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 42 |
| Conread position: | 238-607 |
| Cow position: | chr6:1412131-1411758 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 101, 158 |
| Conread position: | 243-607 |
| Cow position: | chr6:25214079-25214440 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 39 |
| Conread position: | 244-607 |
| Cow position: | chr6:28106022-28105664 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 259 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 49, 72 |
| Conread position: | 292-507 |
| Cow position: | chr6:40240277-40240502 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 65, 111 |
| Conread position: | 307-608 |
| Cow position: | chr6:32074859-32074551 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 198 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 81, 74 |
| Conread position: | 345-607 |
| Cow position: | chr6:7866831-7866569 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 203 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 47 |
| Conread position: | 345-607 |
| Cow position: | chr6:39908449-39908709 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 201 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 348-607 |
| Cow position: | chr6:3148928-3149186 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 204 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 20 |
| Conread position: | 353-564 |
| Cow position: | chr6:63198146-63197937 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 106, 32 |
| Conread position: | 354-582 |
| Cow position: | chr6:12095471-12095246 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 152 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 107, 65 |
| Conread position: | 354-605 |
| Cow position: | chr6:25359435-25359690 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 173 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 107, 38 |
| Conread position: | 357-604 |
| Cow position: | chr6:31568867-31568626 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 171 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 94, 35 |
| Conread position: | 358-607 |
| Cow position: | chr6:64715163-64715411 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 192 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 33 |
| Conread position: | 358-608 |
| Cow position: | chr6:33900691-33900439 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 122, 210 |
| Conread position: | 366-607 |
| Cow position: | chr6:47043263-47043017 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 190 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 25 |
| Conread position: | 380-596 |
| Cow position: | chr6:40315012-40315224 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 156 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 426-607 |
| Cow position: | chr6:40251663-40251845 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 141 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 477-608 |
| Cow position: | chr6:43608301-43608175 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 107 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 484-607 |
| Cow position: | chr6:65007747-65007867 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 103 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 494-607 |
| Cow position: | chr6:10641229-10641341 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 90 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 63, 0 |
Show alignments to all cow chromosomes.