Cow genome map

Conread name: Ss1.1-Pig4-TMW8047O02.5

Conread position: 1-85
Cow position:
Alignm length: 85
Alignm identity: 75
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 1-88
Cow position:
Alignm length: 88
Alignm identity: 76
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 1-88
Cow position:
Alignm length: 88
Alignm identity: 76
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 1-94
Cow position:
Alignm length: 94
Alignm identity: 81
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 76-400
Cow position:
Alignm length: 334
Alignm identity: 224
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 34, 139

Conread position: 77-607
Cow position:
Alignm length: 543
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 9

Conread position: 79-595
Cow position:
Alignm length: 527
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 226

Conread position: 79-607
Cow position:
Alignm length: 534
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 176

Conread position: 79-607
Cow position:
Alignm length: 551
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 334

Conread position: 80-382
Cow position:
Alignm length: 311
Alignm identity: 209
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 34, 51

Conread position: 81-521
Cow position:
Alignm length: 450
Alignm identity: 277
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 9, 35

Conread position: 84-312
Cow position:
Alignm length: 233
Alignm identity: 170
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 47, 5

Conread position: 84-519
Cow position:
Alignm length: 444
Alignm identity: 297
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 49, 31

Conread position: 84-605
Cow position:
Alignm length: 535
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 128

Conread position: 84-607
Cow position:
Alignm length: 542
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 8

Conread position: 84-616
Cow position:
Alignm length: 541
Alignm identity: 357
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 29, 196

Conread position: 85-607
Cow position:
Alignm length: 532
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 128

Conread position: 87-270
Cow position:
Alignm length: 189
Alignm identity: 137
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 10, 77

Conread position: 88-605
Cow position:
Alignm length: 543
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 321

Conread position: 89-584
Cow position:
Alignm length: 503
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 101

Conread position: 89-607
Cow position:
Alignm length: 529
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 117

Conread position: 89-607
Cow position:
Alignm length: 529
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 306

Conread position: 91-308
Cow position:
Alignm length: 223
Alignm identity: 159
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 10, 30

Conread position: 91-401
Cow position:
Alignm length: 325
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 20

Conread position: 91-409
Cow position:
Alignm length: 329
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 103

Conread position: 91-605
Cow position:
Alignm length: 531
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 8

Conread position: 91-607
Cow position:
Alignm length: 527
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 114

Conread position: 91-681
Cow position:
Alignm length: 608
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 244

Conread position: 92-243
Cow position:
Alignm length: 155
Alignm identity: 114
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 39, 89

Conread position: 92-292
Cow position:
Alignm length: 204
Alignm identity: 141
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 12, 111

Conread position: 92-375
Cow position:
Alignm length: 290
Alignm identity: 205
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 88, 19

Conread position: 92-578
Cow position:
Alignm length: 507
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 19

Conread position: 92-607
Cow position:
Alignm length: 527
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 19

Conread position: 92-607
Cow position:
Alignm length: 528
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 19

Conread position: 92-607
Cow position:
Alignm length: 526
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 98

Conread position: 93-564
Cow position:
Alignm length: 479
Alignm identity: 303
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 61, 11

Conread position: 93-605
Cow position:
Alignm length: 522
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 93

Conread position: 94-254
Cow position:
Alignm length: 163
Alignm identity: 117
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 43, 21

Conread position: 94-457
Cow position:
Alignm length: 378
Alignm identity: 245
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 25, 107

Conread position: 94-554
Cow position:
Alignm length: 471
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 307

Conread position: 94-589
Cow position:
Alignm length: 507
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 308

Conread position: 94-597
Cow position:
Alignm length: 510
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 80

Conread position: 94-601
Cow position:
Alignm length: 527
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 84

Conread position: 94-602
Cow position:
Alignm length: 525
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 124

Conread position: 94-607
Cow position:
Alignm length: 531
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 156

Conread position: 94-607
Cow position:
Alignm length: 528
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 89

Conread position: 94-607
Cow position:
Alignm length: 517
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 96

Conread position: 94-607
Cow position:
Alignm length: 525
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 307

Conread position: 94-607
Cow position:
Alignm length: 526
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 309

Conread position: 94-607
Cow position:
Alignm length: 525
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 308

Conread position: 94-607
Cow position:
Alignm length: 526
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 423

Conread position: 94-607
Cow position:
Alignm length: 528
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 25

Conread position: 94-607
Cow position:
Alignm length: 525
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 82

Conread position: 95-345
Cow position:
Alignm length: 257
Alignm identity: 185
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 20, 68

Conread position: 95-345
Cow position:
Alignm length: 264
Alignm identity: 179
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 36, 94

Conread position: 95-466
Cow position:
Alignm length: 384
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 9

Conread position: 95-473
Cow position:
Alignm length: 389
Alignm identity: 269
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 18, 96

Conread position: 95-565
Cow position:
Alignm length: 484
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 301

Conread position: 95-599
Cow position:
Alignm length: 519
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 308

Conread position: 95-605
Cow position:
Alignm length: 519
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 362

Conread position: 95-607
Cow position:
Alignm length: 526
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 99

Conread position: 95-607
Cow position:
Alignm length: 525
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 116

Conread position: 95-607
Cow position:
Alignm length: 526
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 67

Conread position: 95-607
Cow position:
Alignm length: 519
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 157

Conread position: 95-607
Cow position:
Alignm length: 523
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 84

Conread position: 95-607
Cow position:
Alignm length: 518
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 238

Conread position: 95-607
Cow position:
Alignm length: 524
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 301

Conread position: 95-607
Cow position:
Alignm length: 524
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 95

Conread position: 95-607
Cow position:
Alignm length: 525
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 306

Conread position: 95-607
Cow position:
Alignm length: 524
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 301

Conread position: 95-607
Cow position:
Alignm length: 524
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 157

Conread position: 95-607
Cow position:
Alignm length: 525
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 95

Conread position: 95-607
Cow position:
Alignm length: 517
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 129

Conread position: 95-607
Cow position:
Alignm length: 524
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 305

Conread position: 95-607
Cow position:
Alignm length: 525
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 95

Conread position: 95-607
Cow position:
Alignm length: 521
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 75

Conread position: 96-383
Cow position:
Alignm length: 303
Alignm identity: 219
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 14, 70

Conread position: 96-532
Cow position:
Alignm length: 448
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 74

Conread position: 96-602
Cow position:
Alignm length: 513
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 279

Conread position: 96-607
Cow position:
Alignm length: 537
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 65

Conread position: 96-607
Cow position:
Alignm length: 527
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 304

Conread position: 96-608
Cow position:
Alignm length: 537
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 19

Conread position: 97-595
Cow position:
Alignm length: 510
Alignm identity: 306
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 20, 31

Conread position: 97-596
Cow position:
Alignm length: 511
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 24

Conread position: 97-605
Cow position:
Alignm length: 519
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 311

Conread position: 97-607
Cow position:
Alignm length: 523
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 307

Conread position: 97-607
Cow position:
Alignm length: 521
Alignm identity: 337
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 37, 21

Conread position: 98-585
Cow position:
Alignm length: 498
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 23

Conread position: 99-607
Cow position:
Alignm length: 524
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 59

Conread position: 100-607
Cow position:
Alignm length: 513
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 56

Conread position: 105-447
Cow position:
Alignm length: 347
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 123

Conread position: 108-607
Cow position:
Alignm length: 510
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 26

Conread position: 111-356
Cow position:
Alignm length: 250
Alignm identity: 183
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 20, 91

Conread position: 111-485
Cow position:
Alignm length: 386
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 91

Conread position: 111-594
Cow position:
Alignm length: 500
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 79

Conread position: 111-605
Cow position:
Alignm length: 505
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 175, 48

Conread position: 111-607
Cow position:
Alignm length: 515
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 297

Conread position: 111-607
Cow position:
Alignm length: 508
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 51

Conread position: 115-290
Cow position:
Alignm length: 178
Alignm identity: 130
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 22, 169

Conread position: 120-549
Cow position:
Alignm length: 440
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 121

Conread position: 130-605
Cow position:
Alignm length: 483
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 234, 39

Conread position: 130-606
Cow position:
Alignm length: 487
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 46

Conread position: 131-607
Cow position:
Alignm length: 486
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 162, 269

Conread position: 136-602
Cow position:
Alignm length: 471
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 57

Conread position: 140-506
Cow position:
Alignm length: 373
Alignm identity: 247
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 118, 48

Conread position: 173-607
Cow position:
Alignm length: 440
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 222

Conread position: 177-607
Cow position:
Alignm length: 444
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 32

Conread position: 180-601
Cow position:
Alignm length: 436
Alignm identity: 274
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 133, 12

Conread position: 199-607
Cow position:
Alignm length: 417
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 200

Conread position: 201-607
Cow position:
Alignm length: 417
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 115

Conread position: 218-526
Cow position:
Alignm length: 314
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 162, 205

Conread position: 223-601
Cow position:
Alignm length: 403
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 193

Conread position: 230-607
Cow position:
Alignm length: 387
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 163

Conread position: 230-607
Cow position:
Alignm length: 395
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 0

Conread position: 243-601
Cow position:
Alignm length: 368
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 158

Conread position: 250-605
Cow position:
Alignm length: 383
Alignm identity: 246
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 40, 156

Conread position: 255-605
Cow position:
Alignm length: 356
Alignm identity: 233
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 38, 71

Conread position: 258-607
Cow position:
Alignm length: 356
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 34

Conread position: 303-607
Cow position:
Alignm length: 310
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 85

Conread position: 327-607
Cow position:
Alignm length: 287
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 63

Conread position: 334-605
Cow position:
Alignm length: 275
Alignm identity: 196
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 66, 57

Conread position: 344-591
Cow position:
Alignm length: 250
Alignm identity: 185
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 107, 23

Conread position: 353-527
Cow position:
Alignm length: 177
Alignm identity: 124
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 5, 51

Conread position: 354-601
Cow position:
Alignm length: 252
Alignm identity: 178
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 19, 33

Conread position: 355-584
Cow position:
Alignm length: 232
Alignm identity: 160
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 106, 37

Conread position: 358-607
Cow position:
Alignm length: 252
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 33

Conread position: 358-607
Cow position:
Alignm length: 251
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 33

Conread position: 359-508
Cow position:
Alignm length: 152
Alignm identity: 110
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 20, 0

Conread position: 360-520
Cow position:
Alignm length: 162
Alignm identity: 121
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 97, 17

Conread position: 380-594
Cow position:
Alignm length: 216
Alignm identity: 151
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 78, 22

Conread position: 385-607
Cow position:
Alignm length: 224
Alignm identity: 171
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 0

Conread position: 387-575
Cow position:
Alignm length: 194
Alignm identity: 153
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 71, 130

Conread position: 396-607
Cow position:
Alignm length: 213
Alignm identity: 159
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 65, 0

Conread position: 405-607
Cow position:
Alignm length: 204
Alignm identity: 156
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 53, 0

Conread position: 405-607
Cow position:
Alignm length: 204
Alignm identity: 158
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 53, 130

Conread position: 407-584
Cow position:
Alignm length: 184
Alignm identity: 132
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 35, 13

Conread position: 413-585
Cow position:
Alignm length: 173
Alignm identity: 125
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 44, 0

Conread position: 441-607
Cow position:
Alignm length: 169
Alignm identity: 132
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 12, 0

Conread position: 452-601
Cow position:
Alignm length: 151
Alignm identity: 119
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 7, 0

Conread position: 456-607
Cow position:
Alignm length: 152
Alignm identity: 116
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 458-607
Cow position:
Alignm length: 150
Alignm identity: 120
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 469-585
Cow position:
Alignm length: 117
Alignm identity: 93
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 472-607
Cow position:
Alignm length: 136
Alignm identity: 107
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 483-607
Cow position:
Alignm length: 126
Alignm identity: 103
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 10, 0

Conread position: 494-607
Cow position:
Alignm length: 114
Alignm identity: 91
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.