Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8047O02.5 |
| Conread position: | 1-85 |
| Cow position: | chr9:17313697-17313613 (view UCSC Genome Browser custom track) |
| Alignm length: | 85 |
| Alignm identity: | 75 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-88 |
| Cow position: | chr9:5535023-5535110 (view UCSC Genome Browser custom track) |
| Alignm length: | 88 |
| Alignm identity: | 76 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-88 |
| Cow position: | chr9:28680168-28680081 (view UCSC Genome Browser custom track) |
| Alignm length: | 88 |
| Alignm identity: | 76 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-94 |
| Cow position: | chr9:20181222-20181315 (view UCSC Genome Browser custom track) |
| Alignm length: | 94 |
| Alignm identity: | 81 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 76-400 |
| Cow position: | chr9:34107148-34106817 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 224 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 34, 139 |
| Conread position: | 77-607 |
| Cow position: | chr9:781228-780693 (view UCSC Genome Browser custom track) |
| Alignm length: | 543 |
| Alignm identity: | 396 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 9 |
| Conread position: | 79-595 |
| Cow position: | chr9:1252393-1251876 (view UCSC Genome Browser custom track) |
| Alignm length: | 527 |
| Alignm identity: | 377 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 226 |
| Conread position: | 79-607 |
| Cow position: | chr9:163916-163392 (view UCSC Genome Browser custom track) |
| Alignm length: | 534 |
| Alignm identity: | 387 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 176 |
| Conread position: | 79-607 |
| Cow position: | chr9:16267934-16268483 (view UCSC Genome Browser custom track) |
| Alignm length: | 551 |
| Alignm identity: | 401 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 334 |
| Conread position: | 80-382 |
| Cow position: | chr9:2697354-2697045 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 209 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 34, 51 |
| Conread position: | 81-521 |
| Cow position: | chr9:15984067-15984509 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 277 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 9, 35 |
| Conread position: | 84-312 |
| Cow position: | chr9:2488390-2488161 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 47, 5 |
| Conread position: | 84-519 |
| Cow position: | chr9:2202791-2203221 (view UCSC Genome Browser custom track) |
| Alignm length: | 444 |
| Alignm identity: | 297 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 49, 31 |
| Conread position: | 84-605 |
| Cow position: | chr9:64158702-64159227 (view UCSC Genome Browser custom track) |
| Alignm length: | 535 |
| Alignm identity: | 366 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 128 |
| Conread position: | 84-607 |
| Cow position: | chr9:1076624-1076086 (view UCSC Genome Browser custom track) |
| Alignm length: | 542 |
| Alignm identity: | 392 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 8 |
| Conread position: | 84-616 |
| Cow position: | chr9:3938214-3937706 (view UCSC Genome Browser custom track) |
| Alignm length: | 541 |
| Alignm identity: | 357 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 29, 196 |
| Conread position: | 85-607 |
| Cow position: | chr9:27034286-27034811 (view UCSC Genome Browser custom track) |
| Alignm length: | 532 |
| Alignm identity: | 387 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 128 |
| Conread position: | 87-270 |
| Cow position: | chr9:18510144-18509957 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 137 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 10, 77 |
| Conread position: | 88-605 |
| Cow position: | chr9:7062524-7061983 (view UCSC Genome Browser custom track) |
| Alignm length: | 543 |
| Alignm identity: | 381 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 321 |
| Conread position: | 89-584 |
| Cow position: | chr9:35657550-35658035 (view UCSC Genome Browser custom track) |
| Alignm length: | 503 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 101 |
| Conread position: | 89-607 |
| Cow position: | chr9:28626446-28625930 (view UCSC Genome Browser custom track) |
| Alignm length: | 529 |
| Alignm identity: | 393 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 117 |
| Conread position: | 89-607 |
| Cow position: | chr9:30671952-30672479 (view UCSC Genome Browser custom track) |
| Alignm length: | 529 |
| Alignm identity: | 386 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 306 |
| Conread position: | 91-308 |
| Cow position: | chr9:18836369-18836585 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 159 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 10, 30 |
| Conread position: | 91-401 |
| Cow position: | chr9:13219909-13220229 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 20 |
| Conread position: | 91-409 |
| Cow position: | chr9:54360191-54360514 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 103 |
| Conread position: | 91-605 |
| Cow position: | chr9:3567269-3566743 (view UCSC Genome Browser custom track) |
| Alignm length: | 531 |
| Alignm identity: | 381 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 8 |
| Conread position: | 91-607 |
| Cow position: | chr9:4984359-4984878 (view UCSC Genome Browser custom track) |
| Alignm length: | 527 |
| Alignm identity: | 375 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 114 |
| Conread position: | 91-681 |
| Cow position: | chr9:2052035-2052627 (view UCSC Genome Browser custom track) |
| Alignm length: | 608 |
| Alignm identity: | 422 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 244 |
| Conread position: | 92-243 |
| Cow position: | chr9:50789153-50789306 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 114 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 39, 89 |
| Conread position: | 92-292 |
| Cow position: | chr9:54994869-54995069 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 141 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 12, 111 |
| Conread position: | 92-375 |
| Cow position: | chr9:1294224-1293943 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 205 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 88, 19 |
| Conread position: | 92-578 |
| Cow position: | chr9:2185553-2186051 (view UCSC Genome Browser custom track) |
| Alignm length: | 507 |
| Alignm identity: | 360 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 19 |
| Conread position: | 92-607 |
| Cow position: | chr9:16175356-16175878 (view UCSC Genome Browser custom track) |
| Alignm length: | 527 |
| Alignm identity: | 380 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 19 |
| Conread position: | 92-607 |
| Cow position: | chr9:36724090-36724613 (view UCSC Genome Browser custom track) |
| Alignm length: | 528 |
| Alignm identity: | 388 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 19 |
| Conread position: | 92-607 |
| Cow position: | chr9:59443442-59443961 (view UCSC Genome Browser custom track) |
| Alignm length: | 526 |
| Alignm identity: | 373 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 98 |
| Conread position: | 93-564 |
| Cow position: | chr9:48377808-48377339 (view UCSC Genome Browser custom track) |
| Alignm length: | 479 |
| Alignm identity: | 303 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 61, 11 |
| Conread position: | 93-605 |
| Cow position: | chr9:6973745-6974238 (view UCSC Genome Browser custom track) |
| Alignm length: | 522 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 93 |
| Conread position: | 94-254 |
| Cow position: | chr9:37094538-37094699 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 117 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 43, 21 |
| Conread position: | 94-457 |
| Cow position: | chr9:52290231-52290595 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 245 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 25, 107 |
| Conread position: | 94-554 |
| Cow position: | chr9:46626210-46625741 (view UCSC Genome Browser custom track) |
| Alignm length: | 471 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 307 |
| Conread position: | 94-589 |
| Cow position: | chr9:4672196-4672700 (view UCSC Genome Browser custom track) |
| Alignm length: | 507 |
| Alignm identity: | 372 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 308 |
| Conread position: | 94-597 |
| Cow position: | chr9:52570256-52570750 (view UCSC Genome Browser custom track) |
| Alignm length: | 510 |
| Alignm identity: | 364 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 80 |
| Conread position: | 94-601 |
| Cow position: | chr9:131605-131084 (view UCSC Genome Browser custom track) |
| Alignm length: | 527 |
| Alignm identity: | 361 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 84 |
| Conread position: | 94-602 |
| Cow position: | chr9:6757159-6757672 (view UCSC Genome Browser custom track) |
| Alignm length: | 525 |
| Alignm identity: | 349 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 124 |
| Conread position: | 94-607 |
| Cow position: | chr9:9012694-9013218 (view UCSC Genome Browser custom track) |
| Alignm length: | 531 |
| Alignm identity: | 385 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 156 |
| Conread position: | 94-607 |
| Cow position: | chr9:25483462-25483984 (view UCSC Genome Browser custom track) |
| Alignm length: | 528 |
| Alignm identity: | 393 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 89 |
| Conread position: | 94-607 |
| Cow position: | chr9:25755614-25755112 (view UCSC Genome Browser custom track) |
| Alignm length: | 517 |
| Alignm identity: | 369 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 96 |
| Conread position: | 94-607 |
| Cow position: | chr9:27933683-27934202 (view UCSC Genome Browser custom track) |
| Alignm length: | 525 |
| Alignm identity: | 383 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 307 |
| Conread position: | 94-607 |
| Cow position: | chr9:28677563-28678084 (view UCSC Genome Browser custom track) |
| Alignm length: | 526 |
| Alignm identity: | 381 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 309 |
| Conread position: | 94-607 |
| Cow position: | chr9:31194578-31194055 (view UCSC Genome Browser custom track) |
| Alignm length: | 525 |
| Alignm identity: | 384 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 308 |
| Conread position: | 94-607 |
| Cow position: | chr9:34243009-34242486 (view UCSC Genome Browser custom track) |
| Alignm length: | 526 |
| Alignm identity: | 392 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 423 |
| Conread position: | 94-607 |
| Cow position: | chr9:37129946-37129434 (view UCSC Genome Browser custom track) |
| Alignm length: | 528 |
| Alignm identity: | 397 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 25 |
| Conread position: | 94-607 |
| Cow position: | chr9:45872943-45873460 (view UCSC Genome Browser custom track) |
| Alignm length: | 525 |
| Alignm identity: | 387 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 82 |
| Conread position: | 95-345 |
| Cow position: | chr9:32968331-32968585 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 185 |
| Alignm E-value: | 9e-38 |
| Alignm gaps (pig, cow): | 20, 68 |
| Conread position: | 95-345 |
| Cow position: | chr9:51183118-51182858 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 179 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 36, 94 |
| Conread position: | 95-466 |
| Cow position: | chr9:7002144-7002523 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 9 |
| Conread position: | 95-473 |
| Cow position: | chr9:6830954-6830580 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 269 |
| Alignm E-value: | 7.00649e-45 |
| Alignm gaps (pig, cow): | 18, 96 |
| Conread position: | 95-565 |
| Cow position: | chr9:29028639-29028157 (view UCSC Genome Browser custom track) |
| Alignm length: | 484 |
| Alignm identity: | 345 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 301 |
| Conread position: | 95-599 |
| Cow position: | chr9:28021137-28021654 (view UCSC Genome Browser custom track) |
| Alignm length: | 519 |
| Alignm identity: | 371 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 308 |
| Conread position: | 95-605 |
| Cow position: | chr9:59174567-59174051 (view UCSC Genome Browser custom track) |
| Alignm length: | 519 |
| Alignm identity: | 377 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 362 |
| Conread position: | 95-607 |
| Cow position: | chr9:2170648-2171169 (view UCSC Genome Browser custom track) |
| Alignm length: | 526 |
| Alignm identity: | 380 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 99 |
| Conread position: | 95-607 |
| Cow position: | chr9:2500705-2500183 (view UCSC Genome Browser custom track) |
| Alignm length: | 525 |
| Alignm identity: | 362 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 116 |
| Conread position: | 95-607 |
| Cow position: | chr9:3548580-3548061 (view UCSC Genome Browser custom track) |
| Alignm length: | 526 |
| Alignm identity: | 392 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 67 |
| Conread position: | 95-607 |
| Cow position: | chr9:5003603-5004110 (view UCSC Genome Browser custom track) |
| Alignm length: | 519 |
| Alignm identity: | 371 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 157 |
| Conread position: | 95-607 |
| Cow position: | chr9:6051450-6050937 (view UCSC Genome Browser custom track) |
| Alignm length: | 523 |
| Alignm identity: | 373 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 84 |
| Conread position: | 95-607 |
| Cow position: | chr9:10321412-10321919 (view UCSC Genome Browser custom track) |
| Alignm length: | 518 |
| Alignm identity: | 372 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 238 |
| Conread position: | 95-607 |
| Cow position: | chr9:29629157-29628636 (view UCSC Genome Browser custom track) |
| Alignm length: | 524 |
| Alignm identity: | 381 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 301 |
| Conread position: | 95-607 |
| Cow position: | chr9:31807130-31807644 (view UCSC Genome Browser custom track) |
| Alignm length: | 524 |
| Alignm identity: | 389 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 95 |
| Conread position: | 95-607 |
| Cow position: | chr9:37163218-37162695 (view UCSC Genome Browser custom track) |
| Alignm length: | 525 |
| Alignm identity: | 381 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 306 |
| Conread position: | 95-607 |
| Cow position: | chr9:37971617-37971099 (view UCSC Genome Browser custom track) |
| Alignm length: | 524 |
| Alignm identity: | 380 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 301 |
| Conread position: | 95-607 |
| Cow position: | chr9:42309273-42309794 (view UCSC Genome Browser custom track) |
| Alignm length: | 524 |
| Alignm identity: | 386 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 157 |
| Conread position: | 95-607 |
| Cow position: | chr9:42568463-42568983 (view UCSC Genome Browser custom track) |
| Alignm length: | 525 |
| Alignm identity: | 379 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 95 |
| Conread position: | 95-607 |
| Cow position: | chr9:47001796-47002300 (view UCSC Genome Browser custom track) |
| Alignm length: | 517 |
| Alignm identity: | 364 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 129 |
| Conread position: | 95-607 |
| Cow position: | chr9:59456009-59455487 (view UCSC Genome Browser custom track) |
| Alignm length: | 524 |
| Alignm identity: | 370 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 305 |
| Conread position: | 95-607 |
| Cow position: | chr9:59483079-59482561 (view UCSC Genome Browser custom track) |
| Alignm length: | 525 |
| Alignm identity: | 385 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 95 |
| Conread position: | 95-607 |
| Cow position: | chr9:59535689-59536206 (view UCSC Genome Browser custom track) |
| Alignm length: | 521 |
| Alignm identity: | 372 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 75 |
| Conread position: | 96-383 |
| Cow position: | chr9:1979533-1979826 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 219 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 14, 70 |
| Conread position: | 96-532 |
| Cow position: | chr9:2199702-2200143 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 74 |
| Conread position: | 96-602 |
| Cow position: | chr9:3155624-3156129 (view UCSC Genome Browser custom track) |
| Alignm length: | 513 |
| Alignm identity: | 376 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 279 |
| Conread position: | 96-607 |
| Cow position: | chr9:17064806-17064272 (view UCSC Genome Browser custom track) |
| Alignm length: | 537 |
| Alignm identity: | 386 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 65 |
| Conread position: | 96-607 |
| Cow position: | chr9:60278435-60277911 (view UCSC Genome Browser custom track) |
| Alignm length: | 527 |
| Alignm identity: | 386 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 304 |
| Conread position: | 96-608 |
| Cow position: | chr9:31020400-31020934 (view UCSC Genome Browser custom track) |
| Alignm length: | 537 |
| Alignm identity: | 395 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 19 |
| Conread position: | 97-595 |
| Cow position: | chr9:43215407-43214903 (view UCSC Genome Browser custom track) |
| Alignm length: | 510 |
| Alignm identity: | 306 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 20, 31 |
| Conread position: | 97-596 |
| Cow position: | chr9:12845945-12845453 (view UCSC Genome Browser custom track) |
| Alignm length: | 511 |
| Alignm identity: | 347 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 24 |
| Conread position: | 97-605 |
| Cow position: | chr9:3725871-3726387 (view UCSC Genome Browser custom track) |
| Alignm length: | 519 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 311 |
| Conread position: | 97-607 |
| Cow position: | chr9:15072107-15072625 (view UCSC Genome Browser custom track) |
| Alignm length: | 523 |
| Alignm identity: | 400 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 307 |
| Conread position: | 97-607 |
| Cow position: | chr9:55616939-55617441 (view UCSC Genome Browser custom track) |
| Alignm length: | 521 |
| Alignm identity: | 337 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 37, 21 |
| Conread position: | 98-585 |
| Cow position: | chr9:64118425-64118916 (view UCSC Genome Browser custom track) |
| Alignm length: | 498 |
| Alignm identity: | 375 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 23 |
| Conread position: | 99-607 |
| Cow position: | chr9:5424584-5424073 (view UCSC Genome Browser custom track) |
| Alignm length: | 524 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 59 |
| Conread position: | 100-607 |
| Cow position: | chr9:6111364-6110886 (view UCSC Genome Browser custom track) |
| Alignm length: | 513 |
| Alignm identity: | 360 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 56 |
| Conread position: | 105-447 |
| Cow position: | chr9:20310131-20309788 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 123 |
| Conread position: | 108-607 |
| Cow position: | chr9:39992532-39993028 (view UCSC Genome Browser custom track) |
| Alignm length: | 510 |
| Alignm identity: | 366 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 26 |
| Conread position: | 111-356 |
| Cow position: | chr9:829952-829705 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 183 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 20, 91 |
| Conread position: | 111-485 |
| Cow position: | chr9:831826-831444 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 91 |
| Conread position: | 111-594 |
| Cow position: | chr9:222940-222449 (view UCSC Genome Browser custom track) |
| Alignm length: | 500 |
| Alignm identity: | 355 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 79 |
| Conread position: | 111-605 |
| Cow position: | chr9:792901-792404 (view UCSC Genome Browser custom track) |
| Alignm length: | 505 |
| Alignm identity: | 365 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 175, 48 |
| Conread position: | 111-607 |
| Cow position: | chr9:1996314-1995802 (view UCSC Genome Browser custom track) |
| Alignm length: | 515 |
| Alignm identity: | 371 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 297 |
| Conread position: | 111-607 |
| Cow position: | chr9:4532097-4532602 (view UCSC Genome Browser custom track) |
| Alignm length: | 508 |
| Alignm identity: | 372 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 51 |
| Conread position: | 115-290 |
| Cow position: | chr9:31776557-31776733 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 22, 169 |
| Conread position: | 120-549 |
| Cow position: | chr9:3867889-3867462 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 121 |
| Conread position: | 130-605 |
| Cow position: | chr9:3356345-3355880 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 362 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 234, 39 |
| Conread position: | 130-606 |
| Cow position: | chr9:25023674-25023191 (view UCSC Genome Browser custom track) |
| Alignm length: | 487 |
| Alignm identity: | 357 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 161, 46 |
| Conread position: | 131-607 |
| Cow position: | chr9:9055438-9054954 (view UCSC Genome Browser custom track) |
| Alignm length: | 486 |
| Alignm identity: | 360 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 162, 269 |
| Conread position: | 136-602 |
| Cow position: | chr9:8969290-8968843 (view UCSC Genome Browser custom track) |
| Alignm length: | 471 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 57 |
| Conread position: | 140-506 |
| Cow position: | chr9:23409851-23410215 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 247 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 118, 48 |
| Conread position: | 173-607 |
| Cow position: | chr9:3542480-3542918 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 118, 222 |
| Conread position: | 177-607 |
| Cow position: | chr9:10315041-10315478 (view UCSC Genome Browser custom track) |
| Alignm length: | 444 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 32 |
| Conread position: | 180-601 |
| Cow position: | chr9:9331047-9330623 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 274 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 133, 12 |
| Conread position: | 199-607 |
| Cow position: | chr9:37064100-37063692 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 200 |
| Conread position: | 201-607 |
| Cow position: | chr9:30826379-30826793 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 115 |
| Conread position: | 218-526 |
| Cow position: | chr9:59425400-59425706 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 162, 205 |
| Conread position: | 223-601 |
| Cow position: | chr9:3586075-3586473 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 193 |
| Conread position: | 230-607 |
| Cow position: | chr9:3006519-3006134 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 163 |
| Conread position: | 230-607 |
| Cow position: | chr9:34992110-34992504 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 133, 0 |
| Conread position: | 243-601 |
| Cow position: | chr9:50789417-50789782 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 158 |
| Conread position: | 250-605 |
| Cow position: | chr9:37094923-37095304 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 246 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 40, 156 |
| Conread position: | 255-605 |
| Cow position: | chr9:4280214-4280565 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 233 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 38, 71 |
| Conread position: | 258-607 |
| Cow position: | chr9:13477456-13477112 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 101, 34 |
| Conread position: | 303-607 |
| Cow position: | chr9:2001601-2001299 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 85 |
| Conread position: | 327-607 |
| Cow position: | chr9:1979805-1980090 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 63 |
| Conread position: | 334-605 |
| Cow position: | chr9:18836848-18837119 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 196 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 66, 57 |
| Conread position: | 344-591 |
| Cow position: | chr9:43662810-43663043 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 185 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 107, 23 |
| Conread position: | 353-527 |
| Cow position: | chr9:59510649-59510824 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 5, 51 |
| Conread position: | 354-601 |
| Cow position: | chr9:3394128-3393883 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 178 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 19, 33 |
| Conread position: | 355-584 |
| Cow position: | chr9:22410253-22410027 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 160 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 106, 37 |
| Conread position: | 358-607 |
| Cow position: | chr9:32968830-32969078 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 195 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 33 |
| Conread position: | 358-607 |
| Cow position: | chr9:51182332-51182083 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 198 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 33 |
| Conread position: | 359-508 |
| Cow position: | chr9:417703-417552 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 110 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 360-520 |
| Cow position: | chr9:2064811-2064652 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 121 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 97, 17 |
| Conread position: | 380-594 |
| Cow position: | chr9:2475173-2475383 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 151 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 78, 22 |
| Conread position: | 385-607 |
| Cow position: | chr9:40191788-40191565 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 171 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 387-575 |
| Cow position: | chr9:34719860-34720052 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 71, 130 |
| Conread position: | 396-607 |
| Cow position: | chr9:64018560-64018348 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 405-607 |
| Cow position: | chr9:18067311-18067108 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 156 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 405-607 |
| Cow position: | chr9:54361344-54361543 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 158 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 53, 130 |
| Conread position: | 407-584 |
| Cow position: | chr9:39040485-39040666 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 132 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 35, 13 |
| Conread position: | 413-585 |
| Cow position: | chr9:15683852-15684018 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 125 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 441-607 |
| Cow position: | chr9:22653509-22653677 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 132 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 452-601 |
| Cow position: | chr9:44817814-44817964 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 119 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 456-607 |
| Cow position: | chr9:49177867-49177716 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 458-607 |
| Cow position: | chr9:20309569-20309420 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 469-585 |
| Cow position: | chr9:6830527-6830411 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 93 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 472-607 |
| Cow position: | chr9:31064409-31064544 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 107 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 483-607 |
| Cow position: | chr9:2488144-2488019 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 103 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 494-607 |
| Cow position: | chr9:7002519-7002632 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 91 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.