Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8048C12.5
        

               Conread position:
               17-192
               

               Cow position:
               chr14:2173882-2173714 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               35, 125
               

               Conread position:
               29-409
               

               Cow position:
               chr14:35400439-35400821 (view UCSC Genome Browser custom track)
               

               Alignm length:
               390
               

               Alignm identity:
               276
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               96, 33
               

               Conread position:
               29-429
               

               Cow position:
               chr14:5157877-5158283 (view UCSC Genome Browser custom track)
               

               Alignm length:
               413
               

               Alignm identity:
               298
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               241, 36
               

               Conread position:
               30-193
               

               Cow position:
               chr14:35395926-35396089 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               129
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               47, 130
               

               Conread position:
               65-375
               

               Cow position:
               chr14:46721989-46722293 (view UCSC Genome Browser custom track)
               

               Alignm length:
               318
               

               Alignm identity:
               220
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               19, 50
               

               Conread position:
               128-375
               

               Cow position:
               chr14:10617746-10617513 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               175
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               181-365
               

               Cow position:
               chr14:33107042-33106859 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               86, 60
               

               Conread position:
               284-456
               

               Cow position:
               chr14:2346481-2346643 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               167, 88
               
Show alignments to all cow chromosomes.