Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8048C12.5
        

               Conread position:
               27-374
               

               Cow position:
               chr16:3643164-3643522 (view UCSC Genome Browser custom track)
               

               Alignm length:
               367
               

               Alignm identity:
               258
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               7, 39
               

               Conread position:
               29-271
               

               Cow position:
               chr16:42757140-42756902 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               182
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               175, 57
               

               Conread position:
               29-307
               

               Cow position:
               chr16:198152-198427 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               196
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               240, 47
               

               Conread position:
               29-393
               

               Cow position:
               chr16:15363068-15362706 (view UCSC Genome Browser custom track)
               

               Alignm length:
               377
               

               Alignm identity:
               266
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               72, 92
               

               Conread position:
               29-412
               

               Cow position:
               chr16:47364401-47364778 (view UCSC Genome Browser custom track)
               

               Alignm length:
               387
               

               Alignm identity:
               260
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               220, 163
               

               Conread position:
               43-423
               

               Cow position:
               chr16:15367734-15367364 (view UCSC Genome Browser custom track)
               

               Alignm length:
               384
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               159, 56
               

               Conread position:
               129-428
               

               Cow position:
               chr16:44526969-44526678 (view UCSC Genome Browser custom track)
               

               Alignm length:
               301
               

               Alignm identity:
               215
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               77, 113
               

               Conread position:
               158-407
               

               Cow position:
               chr16:7124228-7123979 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               181
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               25, 37
               

               Conread position:
               261-502
               

               Cow position:
               chr16:27163226-27162992 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               189, 112
               
Show alignments to all cow chromosomes.