Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8048C12.5
        

               Conread position:
               23-311
               

               Cow position:
               chr2:19576331-19576616 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               213
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               226, 54
               

               Conread position:
               29-274
               

               Cow position:
               chr2:6609664-6609903 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               187
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               42, 31
               

               Conread position:
               29-275
               

               Cow position:
               chr2:43619325-43619564 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               172
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               132, 0
               

               Conread position:
               29-397
               

               Cow position:
               chr2:56128924-56129280 (view UCSC Genome Browser custom track)
               

               Alignm length:
               371
               

               Alignm identity:
               261
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               153, 75
               

               Conread position:
               29-480
               

               Cow position:
               chr2:12145756-12145330 (view UCSC Genome Browser custom track)
               

               Alignm length:
               460
               

               Alignm identity:
               314
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               102, 56
               

               Conread position:
               31-184
               

               Cow position:
               chr2:43547958-43547808 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               118
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               33-377
               

               Cow position:
               chr2:26572121-26572469 (view UCSC Genome Browser custom track)
               

               Alignm length:
               363
               

               Alignm identity:
               244
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               140, 27
               

               Conread position:
               33-493
               

               Cow position:
               chr2:36909075-36909537 (view UCSC Genome Browser custom track)
               

               Alignm length:
               476
               

               Alignm identity:
               333
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 125
               
Show alignments to all cow chromosomes.