Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8048C12.5
        

               Conread position:
               29-275
               

               Cow position:
               chr23:29980515-29980274 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               168
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               89, 36
               

               Conread position:
               29-403
               

               Cow position:
               chr23:25822990-25822637 (view UCSC Genome Browser custom track)
               

               Alignm length:
               379
               

               Alignm identity:
               255
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               14, 39
               

               Conread position:
               29-428
               

               Cow position:
               chr23:19289130-19288721 (view UCSC Genome Browser custom track)
               

               Alignm length:
               414
               

               Alignm identity:
               287
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               235, 95
               

               Conread position:
               44-385
               

               Cow position:
               chr23:37029007-37029339 (view UCSC Genome Browser custom track)
               

               Alignm length:
               346
               

               Alignm identity:
               244
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               63, 17
               

               Conread position:
               51-316
               

               Cow position:
               chr23:37133311-37133063 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               180
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               60-382
               

               Cow position:
               chr23:796438-796758 (view UCSC Genome Browser custom track)
               

               Alignm length:
               329
               

               Alignm identity:
               243
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               137, 12
               

               Conread position:
               91-427
               

               Cow position:
               chr23:37132489-37132151 (view UCSC Genome Browser custom track)
               

               Alignm length:
               346
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               175, 45
               

               Conread position:
               266-483
               

               Cow position:
               chr23:27156744-27156537 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               162
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               184, 104
               

               Conread position:
               285-485
               

               Cow position:
               chr23:17850494-17850292 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               98, 46
               

               Conread position:
               290-491
               

               Cow position:
               chr23:19342883-19342675 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               148
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               88, 186
               
Show alignments to all cow chromosomes.