Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8048C12.5 |
| Conread position: | 27-495 |
| Cow position: | chr3:39248112-39248558 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 341 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 245, 33 |
| Conread position: | 28-367 |
| Cow position: | chr3:67238539-67238211 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 243 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 53, 70 |
| Conread position: | 29-305 |
| Cow position: | chr3:19245122-19245399 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 201 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 240, 51 |
| Conread position: | 29-498 |
| Cow position: | chr3:36132969-36133411 (view UCSC Genome Browser custom track) |
| Alignm length: | 481 |
| Alignm identity: | 332 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 91, 25 |
| Conread position: | 29-499 |
| Cow position: | chr3:28726007-28726463 (view UCSC Genome Browser custom track) |
| Alignm length: | 476 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 236, 111 |
| Conread position: | 30-174 |
| Cow position: | chr3:30956154-30956014 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 110 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 30-372 |
| Cow position: | chr3:36786069-36786400 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 235 |
| Alignm E-value: | 7.00649e-43 |
| Alignm gaps (pig, cow): | 129, 0 |
| Conread position: | 45-427 |
| Cow position: | chr3:68170287-68170637 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 260 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 215, 16 |
| Conread position: | 51-373 |
| Cow position: | chr3:7811561-7811880 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 231, 78 |
| Conread position: | 72-239 |
| Cow position: | chr3:36783077-36783242 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 128 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 81-425 |
| Cow position: | chr3:62464488-62464162 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 237 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 254, 96 |
| Conread position: | 82-491 |
| Cow position: | chr3:5167034-5167426 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 275 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 173, 77 |
| Conread position: | 131-428 |
| Cow position: | chr3:78248608-78248315 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 212 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 96, 20 |
| Conread position: | 266-500 |
| Cow position: | chr3:37632383-37632149 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 163 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 104, 72 |
| Conread position: | 266-501 |
| Cow position: | chr3:39402556-39402784 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 184, 106 |
| Conread position: | 267-425 |
| Cow position: | chr3:62422299-62422457 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 17, 74 |
| Conread position: | 272-491 |
| Cow position: | chr3:42692446-42692235 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 163 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 178, 101 |
Show alignments to all cow chromosomes.