Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8048C12.5
        

               Conread position:
               19-180
               

               Cow position:
               chr4:34567750-34567591 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               124
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               140, 0
               

               Conread position:
               21-428
               

               Cow position:
               chr4:7121675-7122062 (view UCSC Genome Browser custom track)
               

               Alignm length:
               409
               

               Alignm identity:
               305
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               301, 41
               

               Conread position:
               29-194
               

               Cow position:
               chr4:55479155-55479313 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               133
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               60, 107
               

               Conread position:
               29-203
               

               Cow position:
               chr4:28171413-28171242 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               129
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               147, 47
               

               Conread position:
               29-264
               

               Cow position:
               chr4:8195240-8195020 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               178
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               33, 13
               

               Conread position:
               29-485
               

               Cow position:
               chr4:17645140-17645569 (view UCSC Genome Browser custom track)
               

               Alignm length:
               461
               

               Alignm identity:
               335
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               254, 58
               

               Conread position:
               43-313
               

               Cow position:
               chr4:46864758-46864485 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               206
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 103
               

               Conread position:
               115-423
               

               Cow position:
               chr4:8566089-8566393 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               222
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               156, 39
               

               Conread position:
               139-431
               

               Cow position:
               chr4:7564507-7564216 (view UCSC Genome Browser custom track)
               

               Alignm length:
               299
               

               Alignm identity:
               210
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               130, 21
               

               Conread position:
               161-423
               

               Cow position:
               chr4:7234422-7234151 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               196
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               60, 111
               
Show alignments to all cow chromosomes.