Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8048C12.5 |
| Conread position: | 14-150 |
| Cow position: | chr5:45554919-45554783 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 114 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 27-378 |
| Cow position: | chr5:23135274-23134926 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 240, 11 |
| Conread position: | 29-265 |
| Cow position: | chr5:60921108-60921338 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 173 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 35, 125 |
| Conread position: | 29-362 |
| Cow position: | chr5:2189051-2189370 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 245 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 40, 94 |
| Conread position: | 29-425 |
| Cow position: | chr5:37218913-37219304 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 273 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 191, 44 |
| Conread position: | 29-427 |
| Cow position: | chr5:30120049-30120443 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 272 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 94, 13 |
| Conread position: | 29-483 |
| Cow position: | chr5:31519284-31519729 (view UCSC Genome Browser custom track) |
| Alignm length: | 465 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 69 |
| Conread position: | 30-196 |
| Cow position: | chr5:35499726-35499564 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 127 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 161, 14 |
| Conread position: | 54-301 |
| Cow position: | chr5:12552853-12552604 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 180 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 72, 94 |
| Conread position: | 58-417 |
| Cow position: | chr5:35463435-35463800 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 120, 11 |
| Conread position: | 91-394 |
| Cow position: | chr5:51972777-51972475 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 168, 71 |
| Conread position: | 163-480 |
| Cow position: | chr5:46815700-46815385 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 235 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 106, 78 |
| Conread position: | 167-434 |
| Cow position: | chr5:34182609-34182882 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 205 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 102, 78 |
| Conread position: | 270-495 |
| Cow position: | chr5:45551589-45551373 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 169 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 64, 24 |
Show alignments to all cow chromosomes.