Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8048C12.5
        

               Conread position:
               29-374
               

               Cow position:
               chr6:22785367-22785006 (view UCSC Genome Browser custom track)
               

               Alignm length:
               366
               

               Alignm identity:
               245
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               88, 11
               

               Conread position:
               29-428
               

               Cow position:
               chr6:47463215-47462819 (view UCSC Genome Browser custom track)
               

               Alignm length:
               410
               

               Alignm identity:
               279
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               19, 54
               

               Conread position:
               29-429
               

               Cow position:
               chr6:14870783-14870393 (view UCSC Genome Browser custom track)
               

               Alignm length:
               407
               

               Alignm identity:
               291
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               246, 43
               

               Conread position:
               32-185
               

               Cow position:
               chr6:27506763-27506616 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               35-428
               

               Cow position:
               chr6:1239168-1238772 (view UCSC Genome Browser custom track)
               

               Alignm length:
               406
               

               Alignm identity:
               290
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 87
               

               Conread position:
               44-427
               

               Cow position:
               chr6:14865669-14865304 (view UCSC Genome Browser custom track)
               

               Alignm length:
               386
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               184, 20
               

               Conread position:
               46-193
               

               Cow position:
               chr6:50412963-50412822 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               111
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               267-423
               

               Cow position:
               chr6:27506569-27506421 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               117
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               283-462
               

               Cow position:
               chr6:44638625-44638456 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               168, 89
               
Show alignments to all cow chromosomes.