Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8048C12.5
        

               Conread position:
               27-260
               

               Cow position:
               chr9:25649938-25650164 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               173
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               12, 87
               

               Conread position:
               27-464
               

               Cow position:
               chr9:414740-414315 (view UCSC Genome Browser custom track)
               

               Alignm length:
               455
               

               Alignm identity:
               308
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               35, 105
               

               Conread position:
               31-370
               

               Cow position:
               chr9:402785-402441 (view UCSC Genome Browser custom track)
               

               Alignm length:
               348
               

               Alignm identity:
               239
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               151, 106
               

               Conread position:
               77-210
               

               Cow position:
               chr9:25542120-25541991 (view UCSC Genome Browser custom track)
               

               Alignm length:
               134
               

               Alignm identity:
               109
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               100-369
               

               Cow position:
               chr9:23001393-23001657 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               200
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               23, 38
               

               Conread position:
               270-428
               

               Cow position:
               chr9:25541089-25540929 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               123
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               74, 65
               

               Conread position:
               272-461
               

               Cow position:
               chr9:51159017-51158830 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               178, 23
               

               Conread position:
               283-413
               

               Cow position:
               chr9:3982396-3982266 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               98
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               0, 0
               
Show alignments to all cow chromosomes.