Cow genome map

Conread name: Ss1.1-Pig4-TMW8048G17.3

Conread position: 387-588
Cow position: chr10:30741584-30741380 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 155
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 17, 150

Conread position: 406-583
Cow position: chr10:68251998-68251818 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 130
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 49, 161

Conread position: 417-572
Cow position: chr10:7908527-7908687 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 121
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 26, 0

Conread position: 418-583
Cow position: chr10:68566348-68566184 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 128
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 24, 51

Conread position: 419-558
Cow position: chr10:49060605-49060464 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 109
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 46, 16

Conread position: 419-587
Cow position: chr10:52244473-52244646 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 134
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 23, 6

Conread position: 419-588
Cow position: chr10:16683636-16683807 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 126
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 6, 0

Conread position: 420-583
Cow position: chr10:29084239-29084076 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 125
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 22, 53

Conread position: 420-583
Cow position: chr10:61113359-61113193 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 127
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 48, 0

Conread position: 420-588
Cow position: chr10:19590588-19590763 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 132
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 16, 100

Conread position: 420-588
Cow position: chr10:69226101-69225926 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 134
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 22, 13

Conread position: 421-583
Cow position: chr10:6038168-6038333 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 123
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 14, 145

Conread position: 421-583
Cow position: chr10:69544173-69544342 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 127
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 22, 60

Conread position: 423-583
Cow position: chr10:9341564-9341731 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 132
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 19, 92

Conread position: 423-588
Cow position: chr10:11403968-11404136 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 126
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 19, 48

Conread position: 424-588
Cow position: chr10:64071556-64071399 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 122
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 18, 45

Conread position: 425-585
Cow position: chr10:2406965-2407128 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 119
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 53, 0

Conread position: 425-586
Cow position: chr10:20952299-20952137 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 123
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 17, 109

Conread position: 425-588
Cow position: chr10:19704345-19704513 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 133
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 44, 19

Conread position: 426-583
Cow position: chr10:38429385-38429544 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 117
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 43, 85

Conread position: 426-588
Cow position: chr10:24786274-24786108 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 132
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 29, 9

Conread position: 427-579
Cow position: chr10:6568390-6568240 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 116
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 80, 0

Conread position: 427-586
Cow position: chr10:65071951-65072114 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 128
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 19, 70

Conread position: 427-588
Cow position: chr10:32560867-32560701 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 123
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 28, 161

Conread position: 427-588
Cow position: chr10:49624934-49624767 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 127
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 15, 0

Conread position: 428-588
Cow position: chr10:10124508-10124343 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 128
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 41, 0

Conread position: 428-588
Cow position: chr10:41771011-41771171 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 122
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 31, 15

Conread position: 429-588
Cow position: chr10:41984723-41984887 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 125
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 35, 0

Conread position: 429-588
Cow position: chr10:52069812-52069974 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 130
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 21, 15

Conread position: 431-588
Cow position: chr10:23404361-23404202 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 122
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 11, 90

Conread position: 433-586
Cow position: chr10:16386051-16386203 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 120
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 9, 62

Conread position: 435-582
Cow position: chr10:31368577-31368726 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 118
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 19, 56

Conread position: 435-583
Cow position: chr10:22479569-22479721 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 114
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 34, 78

Conread position: 435-583
Cow position: chr10:35716935-35717084 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 115
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 27, 61

Conread position: 435-583
Cow position: chr10:62325768-62325617 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 115
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 40, 94

Conread position: 435-585
Cow position: chr10:11497379-11497223 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 122
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 33, 0

Conread position: 435-588
Cow position: chr10:3115640-3115481 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 124
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 34, 67

Conread position: 435-588
Cow position: chr10:8412896-8413051 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 118
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 34, 20

Conread position: 435-588
Cow position: chr10:52889080-52889235 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 125
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 32, 0

Conread position: 436-583
Cow position: chr10:51878291-51878144 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 114
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 33, 74

Conread position: 436-587
Cow position: chr10:38518480-38518628 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 115
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 111, 69

Conread position: 437-583
Cow position: chr10:8760010-8760155 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 112
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 32, 74

Conread position: 437-588
Cow position: chr10:23096625-23096780 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 116
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 110, 0

Conread position: 438-583
Cow position: chr10:59153507-59153650 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 116
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 10, 44

Conread position: 440-585
Cow position: chr10:31250588-31250735 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 118
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 29, 127

Conread position: 441-583
Cow position: chr10:16649782-16649925 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 110
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 64, 0

Conread position: 441-583
Cow position: chr10:45299959-45299816 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 113
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 32, 0

Conread position: 441-588
Cow position: chr10:43250215-43250361 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 118
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 28, 78

Conread position: 441-588
Cow position: chr10:49586314-49586467 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 119
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 28, 0

Conread position: 447-588
Cow position: chr10:6490626-6490764 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 115
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 14, 0

Conread position: 458-585
Cow position: chr10:52589551-52589678 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 100
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 87, 119

Conread position: 458-588
Cow position: chr10:9794528-9794661 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 107
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 11, 0

Conread position: 458-588
Cow position: chr10:11317082-11316953 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 101
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 89, 63

Conread position: 458-588
Cow position: chr10:58608232-58608102 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 101
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 462-572
Cow position: chr10:64364343-64364232 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 90
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 87, 0

Conread position: 462-583
Cow position: chr10:2266921-2267041 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 105
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 46, 0

Conread position: 462-584
Cow position: chr10:42454245-42454122 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 99
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 86, 0

Conread position: 462-588
Cow position: chr10:23948793-23948919 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 100
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 462-588
Cow position: chr10:26620435-26620556 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 105
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 95, 0

Conread position: 462-588
Cow position: chr10:27538625-27538502 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 104
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 48, 0

Conread position: 462-588
Cow position: chr10:29689207-29689332 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 102
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 28, 0

Conread position: 462-588
Cow position: chr10:45606308-45606426 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 101
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 29, 0

Conread position: 462-588
Cow position: chr10:61426609-61426735 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 105
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 463-580
Cow position: chr10:30753298-30753182 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 93
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 45, 0

Conread position: 463-581
Cow position: chr10:50044519-50044637 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 99
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 93, 27

Conread position: 463-586
Cow position: chr10:56705461-56705585 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 97
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 86, 0

Conread position: 463-588
Cow position: chr10:15873952-15874075 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 101
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 28, 0

Conread position: 463-588
Cow position: chr10:38449188-38449311 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 99
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 85, 68

Conread position: 463-588
Cow position: chr10:48255099-48255225 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 110
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 85, 0

Conread position: 463-588
Cow position: chr10:58746124-58746250 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 99
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 111, 0

Conread position: 467-588
Cow position: chr10:62517003-62516882 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 93
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 469-583
Cow position: chr10:53762002-53762113 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 94
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 61, 0

Conread position: 492-583
Cow position: chr10:21424583-21424674 (view UCSC Genome Browser custom track)
Alignm length: 92
Alignm identity: 78
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 496-588
Cow position: chr10:8077069-8077161 (view UCSC Genome Browser custom track)
Alignm length: 93
Alignm identity: 79
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.