Cow genome map

Conread name: Ss1.1-Pig4-TMW8048G17.3

Conread position: 380-585
Cow position: chr20:39220447-39220646 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 150
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 51, 0

Conread position: 391-588
Cow position: chr20:20359514-20359716 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 151
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 38, 43

Conread position: 398-583
Cow position: chr20:17397004-17397192 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 134
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 72, 17

Conread position: 417-568
Cow position: chr20:24868773-24868928 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 113
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 25, 0

Conread position: 417-588
Cow position: chr20:8262161-8261982 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 139
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 15, 99

Conread position: 417-588
Cow position: chr20:21518881-21518715 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 125
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 35, 0

Conread position: 418-575
Cow position: chr20:11355427-11355269 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 118
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 51, 149

Conread position: 418-588
Cow position: chr20:25147017-25146849 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 129
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 28, 0

Conread position: 419-583
Cow position: chr20:23235272-23235102 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 121
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 24, 0

Conread position: 419-588
Cow position: chr20:32972786-32972617 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 132
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 32, 78

Conread position: 425-559
Cow position: chr20:32975431-32975298 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 106
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 108, 79

Conread position: 425-560
Cow position: chr20:2801633-2801772 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 108
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 30, 0

Conread position: 425-571
Cow position: chr20:26880668-26880815 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 109
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 34, 0

Conread position: 425-584
Cow position: chr20:19865477-19865318 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 122
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 425-588
Cow position: chr20:14471342-14471505 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 121
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 17, 52

Conread position: 425-588
Cow position: chr20:33962964-33962800 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 124
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 149, 0

Conread position: 426-583
Cow position: chr20:2456258-2456100 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 121
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 46, 7

Conread position: 426-584
Cow position: chr20:41109862-41110030 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 127
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 9, 114

Conread position: 426-585
Cow position: chr20:4157650-4157486 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 126
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 16, 0

Conread position: 427-588
Cow position: chr20:6104918-6105087 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 130
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 7, 0

Conread position: 427-588
Cow position: chr20:8444916-8445082 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 119
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 45, 0

Conread position: 427-588
Cow position: chr20:14513261-14513098 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 125
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 6, 0

Conread position: 428-588
Cow position: chr20:10837984-10838146 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 117
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 62, 0

Conread position: 428-588
Cow position: chr20:23163671-23163834 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 127
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 15, 148

Conread position: 431-574
Cow position: chr20:25686117-25686268 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 114
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 12, 0

Conread position: 431-588
Cow position: chr20:5763066-5763227 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 129
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 36, 50

Conread position: 433-579
Cow position: chr20:37136313-37136161 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 113
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 36, 0

Conread position: 434-588
Cow position: chr20:24850027-24849873 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 115
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 114, 69

Conread position: 435-583
Cow position: chr20:4204505-4204357 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 108
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 435-583
Cow position: chr20:13608846-13608997 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 118
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 34, 0

Conread position: 435-585
Cow position: chr20:14679841-14679687 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 121
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 35, 77

Conread position: 435-588
Cow position: chr20:17670403-17670250 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 125
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 25, 69

Conread position: 436-562
Cow position: chr20:38184258-38184130 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 98
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 33, 0

Conread position: 436-583
Cow position: chr20:35924564-35924713 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 117
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 33, 94

Conread position: 436-588
Cow position: chr20:6903536-6903380 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 117
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 30, 44

Conread position: 441-573
Cow position: chr20:6571827-6571696 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 100
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 122, 0

Conread position: 445-584
Cow position: chr20:38858226-38858356 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 109
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 28, 0

Conread position: 447-587
Cow position: chr20:10759264-10759406 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 115
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 20, 33

Conread position: 458-581
Cow position: chr20:32668170-32668044 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 99
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 11, 0

Conread position: 458-583
Cow position: chr20:27001582-27001458 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 97
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 50, 0

Conread position: 458-588
Cow position: chr20:21236849-21236723 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 104
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 36, 0

Conread position: 462-583
Cow position: chr20:23604542-23604663 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 96
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 462-583
Cow position: chr20:35683213-35683334 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 99
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 462-586
Cow position: chr20:16979941-16979817 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 94
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 462-588
Cow position: chr20:4933878-4934003 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 108
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 41, 0

Conread position: 462-588
Cow position: chr20:7100978-7100848 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 106
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 70, 0

Conread position: 462-588
Cow position: chr20:9706726-9706853 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 98
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 86, 0

Conread position: 463-583
Cow position: chr20:220800-220682 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 96
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 113, 90

Conread position: 463-585
Cow position: chr20:32587547-32587427 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 96
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 44, 0

Conread position: 464-583
Cow position: chr20:3105206-3105087 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 98
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 464-588
Cow position: chr20:25823467-25823345 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 101
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 86, 0

Conread position: 470-583
Cow position: chr20:39669128-39669016 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 92
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 14, 0

Conread position: 490-588
Cow position: chr20:37450714-37450616 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 83
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.