Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8048G17.3 |
| Conread position: | 390-568 |
| Cow position: | chr23:16072122-16072300 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 41, 54 |
| Conread position: | 390-588 |
| Cow position: | chr23:15872469-15872668 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 25, 36 |
| Conread position: | 390-588 |
| Cow position: | chr23:35155606-35155401 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 22, 171 |
| Conread position: | 417-588 |
| Cow position: | chr23:347552-347719 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 126 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 418-581 |
| Cow position: | chr23:11564176-11564343 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 24, 114 |
| Conread position: | 419-558 |
| Cow position: | chr23:3514045-3514181 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 104 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 419-583 |
| Cow position: | chr23:28871944-28872112 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 126 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 23, 14 |
| Conread position: | 419-587 |
| Cow position: | chr23:36082787-36082612 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 420-588 |
| Cow position: | chr23:21866935-21866768 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 130, 0 |
| Conread position: | 422-587 |
| Cow position: | chr23:39117816-39117974 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 124 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 7, 32 |
| Conread position: | 423-588 |
| Cow position: | chr23:35362594-35362751 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 126 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 19, 43 |
| Conread position: | 425-583 |
| Cow position: | chr23:26217749-26217592 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 147, 0 |
| Conread position: | 425-588 |
| Cow position: | chr23:11434067-11434234 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 131 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 17, 66 |
| Conread position: | 425-588 |
| Cow position: | chr23:15070972-15071128 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 426-570 |
| Cow position: | chr23:37223879-37224029 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 426-588 |
| Cow position: | chr23:33928001-33927833 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 429-575 |
| Cow position: | chr23:30735959-30736108 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 13, 102 |
| Conread position: | 429-588 |
| Cow position: | chr23:13360016-13359853 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 127 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 26, 148 |
| Conread position: | 431-584 |
| Cow position: | chr23:38941809-38941652 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 119 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 32, 99 |
| Conread position: | 433-586 |
| Cow position: | chr23:21275832-21275989 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 119 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 433-588 |
| Cow position: | chr23:29272296-29272141 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 123 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 434-588 |
| Cow position: | chr23:30308087-30307934 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 435-569 |
| Cow position: | chr23:26067275-26067137 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 104 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 435-585 |
| Cow position: | chr23:18326988-18326832 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 114 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 435-586 |
| Cow position: | chr23:1551056-1550905 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 112 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 24, 17 |
| Conread position: | 435-588 |
| Cow position: | chr23:14840333-14840485 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 120 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 140, 0 |
| Conread position: | 435-588 |
| Cow position: | chr23:17092316-17092471 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 13, 55 |
| Conread position: | 435-588 |
| Cow position: | chr23:21847939-21847780 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 436-587 |
| Cow position: | chr23:2762204-2762052 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 114 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 64, 54 |
| Conread position: | 441-583 |
| Cow position: | chr23:16793758-16793613 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 117 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 441-585 |
| Cow position: | chr23:4956197-4956049 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 14, 145 |
| Conread position: | 442-585 |
| Cow position: | chr23:7611436-7611292 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 117 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 27, 69 |
| Conread position: | 452-588 |
| Cow position: | chr23:20171744-20171605 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 104 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 462-583 |
| Cow position: | chr23:20585549-20585671 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 101 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 113, 0 |
| Conread position: | 462-588 |
| Cow position: | chr23:5389851-5389727 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 101 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 462-588 |
| Cow position: | chr23:8929988-8930111 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 105 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 462-588 |
| Cow position: | chr23:28721086-28721209 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 108 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 462-588 |
| Cow position: | chr23:40651320-40651447 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 99 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 464-588 |
| Cow position: | chr23:17000855-17000733 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 104 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 464-588 |
| Cow position: | chr23:40609516-40609395 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 98 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 468-588 |
| Cow position: | chr23:28701133-28701013 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 96 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 479-583 |
| Cow position: | chr23:19792110-19792006 (view UCSC Genome Browser custom track) |
| Alignm length: | 105 |
| Alignm identity: | 85 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 484-585 |
| Cow position: | chr23:13320067-13319967 (view UCSC Genome Browser custom track) |
| Alignm length: | 102 |
| Alignm identity: | 84 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 27, 0 |
Show alignments to all cow chromosomes.