Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8048G17.3 |
| Conread position: | 345-588 |
| Cow position: | chr25:20614991-20614746 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 180 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 63, 9 |
| Conread position: | 396-588 |
| Cow position: | chr25:24405515-24405712 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 146 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 409-587 |
| Cow position: | chr25:27534490-27534663 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 26, 84 |
| Conread position: | 410-588 |
| Cow position: | chr25:10748304-10748479 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 130 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 411-588 |
| Cow position: | chr25:33204881-33205057 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 132 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 20, 124 |
| Conread position: | 417-588 |
| Cow position: | chr25:18239708-18239530 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 130 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 38, 173 |
| Conread position: | 417-588 |
| Cow position: | chr25:27534720-27534897 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 25, 144 |
| Conread position: | 418-588 |
| Cow position: | chr25:8511895-8512066 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 25, 141 |
| Conread position: | 419-580 |
| Cow position: | chr25:11041126-11040968 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 6, 0 |
| Conread position: | 419-588 |
| Cow position: | chr25:4716451-4716278 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 47, 133 |
| Conread position: | 422-588 |
| Cow position: | chr25:12932819-12932647 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 128 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 21, 80 |
| Conread position: | 423-588 |
| Cow position: | chr25:18000340-18000508 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 128 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 41, 160 |
| Conread position: | 428-573 |
| Cow position: | chr25:14570552-14570410 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 429-588 |
| Cow position: | chr25:40956801-40956963 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 13, 67 |
| Conread position: | 431-587 |
| Cow position: | chr25:20884910-20885063 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 433-585 |
| Cow position: | chr25:24136262-24136417 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 435-588 |
| Cow position: | chr25:26457498-26457656 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 436-564 |
| Cow position: | chr25:18811037-18810910 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 102 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 34, 52 |
| Conread position: | 438-588 |
| Cow position: | chr25:8576869-8576715 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 122 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 27, 72 |
| Conread position: | 443-584 |
| Cow position: | chr25:37469905-37469766 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 110 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 128, 0 |
| Conread position: | 451-588 |
| Cow position: | chr25:18161441-18161309 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 106 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 452-588 |
| Cow position: | chr25:5365690-5365550 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 96, 7 |
| Conread position: | 458-583 |
| Cow position: | chr25:34970611-34970487 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 105 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 90, 32 |
| Conread position: | 458-588 |
| Cow position: | chr25:14075454-14075325 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 103 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 458-588 |
| Cow position: | chr25:20428469-20428341 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 103 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 458-588 |
| Cow position: | chr25:41093986-41094114 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 105 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 459-588 |
| Cow position: | chr25:27504049-27504176 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 102 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 47, 74 |
| Conread position: | 461-588 |
| Cow position: | chr25:34378957-34379084 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 101 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 86, 42 |
| Conread position: | 462-583 |
| Cow position: | chr25:18228323-18228204 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 100 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 462-583 |
| Cow position: | chr25:20624790-20624909 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 98 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 462-583 |
| Cow position: | chr25:23410806-23410690 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 99 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 34, 47 |
| Conread position: | 462-587 |
| Cow position: | chr25:9109486-9109364 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 97 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 462-588 |
| Cow position: | chr25:6178181-6178056 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 97 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 114, 0 |
| Conread position: | 462-588 |
| Cow position: | chr25:8080873-8080749 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 107 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 462-588 |
| Cow position: | chr25:13560067-13560190 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 102 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 462-588 |
| Cow position: | chr25:23248594-23248719 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 105 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 462-588 |
| Cow position: | chr25:26240686-26240560 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 108 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 462-588 |
| Cow position: | chr25:26652331-26652204 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 99 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 464-583 |
| Cow position: | chr25:30021215-30021096 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 94 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 465-588 |
| Cow position: | chr25:13562576-13562459 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 101 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 471-588 |
| Cow position: | chr25:20811235-20811352 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 91 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.