Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8048G17.3 |
| Conread position: | 397-583 |
| Cow position: | chr27:6348017-6347823 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 404-574 |
| Cow position: | chr27:1085203-1085033 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 135 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 8, 30 |
| Conread position: | 407-588 |
| Cow position: | chr27:17875396-17875209 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 136 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 415-583 |
| Cow position: | chr27:20766199-20766028 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 127 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 27, 131 |
| Conread position: | 417-583 |
| Cow position: | chr27:24333854-24333689 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 127 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 131, 29 |
| Conread position: | 420-588 |
| Cow position: | chr27:13958587-13958411 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 424-587 |
| Cow position: | chr27:25879864-25880034 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 130 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 425-588 |
| Cow position: | chr27:6883806-6883967 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 127 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 17, 40 |
| Conread position: | 425-588 |
| Cow position: | chr27:11208986-11208831 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 425-588 |
| Cow position: | chr27:11746359-11746521 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 123 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 425-588 |
| Cow position: | chr27:12244361-12244193 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 127 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 35, 77 |
| Conread position: | 426-585 |
| Cow position: | chr27:11356765-11356607 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 42, 83 |
| Conread position: | 426-588 |
| Cow position: | chr27:21578810-21578641 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 427-587 |
| Cow position: | chr27:8430672-8430506 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 121 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 427-588 |
| Cow position: | chr27:25998472-25998635 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 125 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 6, 0 |
| Conread position: | 428-579 |
| Cow position: | chr27:31339985-31339830 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 118 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 42, 138 |
| Conread position: | 428-583 |
| Cow position: | chr27:16526074-16525913 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 126 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 429-588 |
| Cow position: | chr27:14937660-14937497 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 26, 84 |
| Conread position: | 429-588 |
| Cow position: | chr27:29039170-29039008 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 118 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 51, 5 |
| Conread position: | 430-588 |
| Cow position: | chr27:1674919-1675082 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 124 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 43, 114 |
| Conread position: | 431-588 |
| Cow position: | chr27:30811224-30811385 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 119 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 11, 137 |
| Conread position: | 432-562 |
| Cow position: | chr27:7983331-7983196 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 103 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 435-583 |
| Cow position: | chr27:19601150-19601300 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 119 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 34, 76 |
| Conread position: | 435-583 |
| Cow position: | chr27:23662818-23662665 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 116 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 435-583 |
| Cow position: | chr27:25982943-25982792 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 118 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 20, 78 |
| Conread position: | 441-588 |
| Cow position: | chr27:19083936-19083784 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 441-588 |
| Cow position: | chr27:24225115-24224966 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 114 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 442-583 |
| Cow position: | chr27:29339521-29339666 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 110 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 452-586 |
| Cow position: | chr27:26161300-26161432 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 104 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 7, 79 |
| Conread position: | 459-588 |
| Cow position: | chr27:21991335-21991464 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 106 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 462-559 |
| Cow position: | chr27:22238067-22237969 (view UCSC Genome Browser custom track) |
| Alignm length: | 99 |
| Alignm identity: | 82 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 95, 0 |
| Conread position: | 462-585 |
| Cow position: | chr27:1899764-1899642 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 101 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 462-586 |
| Cow position: | chr27:30365125-30365249 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 95 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 462-588 |
| Cow position: | chr27:1536920-1536787 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 106 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 101, 0 |
| Conread position: | 462-588 |
| Cow position: | chr27:21681518-21681395 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 98 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 465-579 |
| Cow position: | chr27:6036980-6037095 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 94 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 465-588 |
| Cow position: | chr27:26441238-26441116 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 101 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 114, 0 |
| Conread position: | 467-585 |
| Cow position: | chr27:24341716-24341834 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 98 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 470-587 |
| Cow position: | chr27:26299660-26299774 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 93 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 475-583 |
| Cow position: | chr27:18219217-18219325 (view UCSC Genome Browser custom track) |
| Alignm length: | 109 |
| Alignm identity: | 94 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.