Cow genome map
Conread name: | Ss1.1-Pig4-TMW8048G17.3 |
Conread position: | 381-587 |
Cow position: | chr3:50281544-50281752 (view UCSC Genome Browser custom track) |
Alignm length: | 212 |
Alignm identity: | 155 |
Alignm E-value: | 5e-32 |
Alignm gaps (pig, cow): | 88, 44 |
Conread position: | 384-585 |
Cow position: | chr3:51146471-51146669 (view UCSC Genome Browser custom track) |
Alignm length: | 204 |
Alignm identity: | 147 |
Alignm E-value: | 9e-28 |
Alignm gaps (pig, cow): | 46, 31 |
Conread position: | 394-583 |
Cow position: | chr3:5419671-5419859 (view UCSC Genome Browser custom track) |
Alignm length: | 190 |
Alignm identity: | 141 |
Alignm E-value: | 2e-33 |
Alignm gaps (pig, cow): | 38, 0 |
Conread position: | 407-588 |
Cow position: | chr3:63146971-63147151 (view UCSC Genome Browser custom track) |
Alignm length: | 184 |
Alignm identity: | 130 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 36, 25 |
Conread position: | 410-588 |
Cow position: | chr3:23111330-23111513 (view UCSC Genome Browser custom track) |
Alignm length: | 184 |
Alignm identity: | 143 |
Alignm E-value: | 2e-35 |
Alignm gaps (pig, cow): | 14, 0 |
Conread position: | 410-588 |
Cow position: | chr3:74913028-74912852 (view UCSC Genome Browser custom track) |
Alignm length: | 180 |
Alignm identity: | 132 |
Alignm E-value: | 3e-27 |
Alignm gaps (pig, cow): | 172, 15 |
Conread position: | 411-588 |
Cow position: | chr3:12255651-12255480 (view UCSC Genome Browser custom track) |
Alignm length: | 178 |
Alignm identity: | 137 |
Alignm E-value: | 4e-31 |
Alignm gaps (pig, cow): | 22, 0 |
Conread position: | 413-579 |
Cow position: | chr3:30839422-30839251 (view UCSC Genome Browser custom track) |
Alignm length: | 173 |
Alignm identity: | 125 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 18, 72 |
Conread position: | 415-567 |
Cow position: | chr3:38253250-38253096 (view UCSC Genome Browser custom track) |
Alignm length: | 156 |
Alignm identity: | 116 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 20, 115 |
Conread position: | 417-583 |
Cow position: | chr3:34315651-34315817 (view UCSC Genome Browser custom track) |
Alignm length: | 170 |
Alignm identity: | 130 |
Alignm E-value: | 4e-29 |
Alignm gaps (pig, cow): | 52, 16 |
Conread position: | 418-583 |
Cow position: | chr3:891435-891269 (view UCSC Genome Browser custom track) |
Alignm length: | 169 |
Alignm identity: | 121 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 51, 13 |
Conread position: | 418-584 |
Cow position: | chr3:61411294-61411124 (view UCSC Genome Browser custom track) |
Alignm length: | 172 |
Alignm identity: | 130 |
Alignm E-value: | 1e-28 |
Alignm gaps (pig, cow): | 51, 17 |
Conread position: | 419-583 |
Cow position: | chr3:9630052-9629889 (view UCSC Genome Browser custom track) |
Alignm length: | 170 |
Alignm identity: | 127 |
Alignm E-value: | 6e-23 |
Alignm gaps (pig, cow): | 50, 14 |
Conread position: | 419-583 |
Cow position: | chr3:74611732-74611568 (view UCSC Genome Browser custom track) |
Alignm length: | 166 |
Alignm identity: | 123 |
Alignm E-value: | 9e-27 |
Alignm gaps (pig, cow): | 13, 40 |
Conread position: | 419-588 |
Cow position: | chr3:26493065-26493231 (view UCSC Genome Browser custom track) |
Alignm length: | 170 |
Alignm identity: | 124 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 56, 0 |
Conread position: | 420-587 |
Cow position: | chr3:54881942-54881767 (view UCSC Genome Browser custom track) |
Alignm length: | 177 |
Alignm identity: | 129 |
Alignm E-value: | 5e-22 |
Alignm gaps (pig, cow): | 39, 32 |
Conread position: | 420-588 |
Cow position: | chr3:9074173-9074346 (view UCSC Genome Browser custom track) |
Alignm length: | 174 |
Alignm identity: | 138 |
Alignm E-value: | 2e-36 |
Alignm gaps (pig, cow): | 48, 0 |
Conread position: | 422-588 |
Cow position: | chr3:41550210-41550375 (view UCSC Genome Browser custom track) |
Alignm length: | 167 |
Alignm identity: | 127 |
Alignm E-value: | 4e-31 |
Alignm gaps (pig, cow): | 105, 0 |
Conread position: | 423-585 |
Cow position: | chr3:43591065-43590894 (view UCSC Genome Browser custom track) |
Alignm length: | 172 |
Alignm identity: | 133 |
Alignm E-value: | 3e-28 |
Alignm gaps (pig, cow): | 7, 0 |
Conread position: | 423-588 |
Cow position: | chr3:25075997-25076167 (view UCSC Genome Browser custom track) |
Alignm length: | 171 |
Alignm identity: | 133 |
Alignm E-value: | 5e-33 |
Alignm gaps (pig, cow): | 46, 0 |
Conread position: | 423-588 |
Cow position: | chr3:27532493-27532655 (view UCSC Genome Browser custom track) |
Alignm length: | 166 |
Alignm identity: | 123 |
Alignm E-value: | 8e-26 |
Alignm gaps (pig, cow): | 12, 0 |
Conread position: | 425-583 |
Cow position: | chr3:84112411-84112576 (view UCSC Genome Browser custom track) |
Alignm length: | 166 |
Alignm identity: | 121 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 45, 0 |
Conread position: | 425-584 |
Cow position: | chr3:41718557-41718395 (view UCSC Genome Browser custom track) |
Alignm length: | 163 |
Alignm identity: | 124 |
Alignm E-value: | 4e-29 |
Alignm gaps (pig, cow): | 44, 0 |
Conread position: | 425-585 |
Cow position: | chr3:22953718-22953881 (view UCSC Genome Browser custom track) |
Alignm length: | 165 |
Alignm identity: | 130 |
Alignm E-value: | 5e-32 |
Alignm gaps (pig, cow): | 44, 131 |
Conread position: | 425-585 |
Cow position: | chr3:62628095-62628262 (view UCSC Genome Browser custom track) |
Alignm length: | 168 |
Alignm identity: | 126 |
Alignm E-value: | 3e-26 |
Alignm gaps (pig, cow): | 17, 0 |
Conread position: | 425-588 |
Cow position: | chr3:17633880-17634043 (view UCSC Genome Browser custom track) |
Alignm length: | 169 |
Alignm identity: | 124 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 40, 17 |
Conread position: | 425-588 |
Cow position: | chr3:26740873-26741032 (view UCSC Genome Browser custom track) |
Alignm length: | 164 |
Alignm identity: | 125 |
Alignm E-value: | 1e-28 |
Alignm gaps (pig, cow): | 43, 0 |
Conread position: | 426-588 |
Cow position: | chr3:8746065-8746232 (view UCSC Genome Browser custom track) |
Alignm length: | 169 |
Alignm identity: | 128 |
Alignm E-value: | 9e-27 |
Alignm gaps (pig, cow): | 16, 70 |
Conread position: | 426-588 |
Cow position: | chr3:48629427-48629590 (view UCSC Genome Browser custom track) |
Alignm length: | 164 |
Alignm identity: | 120 |
Alignm E-value: | 8e-26 |
Alignm gaps (pig, cow): | 144, 0 |
Conread position: | 426-588 |
Cow position: | chr3:51492951-51492784 (view UCSC Genome Browser custom track) |
Alignm length: | 169 |
Alignm identity: | 122 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 16, 94 |
Conread position: | 426-588 |
Cow position: | chr3:73741703-73741870 (view UCSC Genome Browser custom track) |
Alignm length: | 169 |
Alignm identity: | 122 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 37, 158 |
Conread position: | 427-584 |
Cow position: | chr3:25027566-25027405 (view UCSC Genome Browser custom track) |
Alignm length: | 162 |
Alignm identity: | 117 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 41, 0 |
Conread position: | 427-588 |
Cow position: | chr3:15221353-15221518 (view UCSC Genome Browser custom track) |
Alignm length: | 166 |
Alignm identity: | 127 |
Alignm E-value: | 4e-29 |
Alignm gaps (pig, cow): | 27, 0 |
Conread position: | 428-586 |
Cow position: | chr3:11919875-11920032 (view UCSC Genome Browser custom track) |
Alignm length: | 164 |
Alignm identity: | 124 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 40, 7 |
Conread position: | 429-583 |
Cow position: | chr3:25091195-25091038 (view UCSC Genome Browser custom track) |
Alignm length: | 162 |
Alignm identity: | 122 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 13, 86 |
Conread position: | 429-583 |
Cow position: | chr3:61323001-61322845 (view UCSC Genome Browser custom track) |
Alignm length: | 157 |
Alignm identity: | 118 |
Alignm E-value: | 3e-26 |
Alignm gaps (pig, cow): | 8, 0 |
Conread position: | 429-588 |
Cow position: | chr3:54340258-54340422 (view UCSC Genome Browser custom track) |
Alignm length: | 166 |
Alignm identity: | 128 |
Alignm E-value: | 3e-27 |
Alignm gaps (pig, cow): | 13, 80 |
Conread position: | 430-582 |
Cow position: | chr3:4329478-4329325 (view UCSC Genome Browser custom track) |
Alignm length: | 154 |
Alignm identity: | 112 |
Alignm E-value: | 6e-23 |
Alignm gaps (pig, cow): | 12, 0 |
Conread position: | 430-584 |
Cow position: | chr3:62798626-62798781 (view UCSC Genome Browser custom track) |
Alignm length: | 156 |
Alignm identity: | 118 |
Alignm E-value: | 9e-28 |
Alignm gaps (pig, cow): | 117, 0 |
Conread position: | 430-588 |
Cow position: | chr3:15654987-15655147 (view UCSC Genome Browser custom track) |
Alignm length: | 161 |
Alignm identity: | 125 |
Alignm E-value: | 4e-31 |
Alignm gaps (pig, cow): | 12, 0 |
Conread position: | 430-588 |
Cow position: | chr3:48211666-48211510 (view UCSC Genome Browser custom track) |
Alignm length: | 160 |
Alignm identity: | 119 |
Alignm E-value: | 7e-25 |
Alignm gaps (pig, cow): | 29, 86 |
Conread position: | 432-588 |
Cow position: | chr3:23091818-23091976 (view UCSC Genome Browser custom track) |
Alignm length: | 162 |
Alignm identity: | 120 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 37, 103 |
Conread position: | 433-583 |
Cow position: | chr3:55991710-55991864 (view UCSC Genome Browser custom track) |
Alignm length: | 156 |
Alignm identity: | 124 |
Alignm E-value: | 1e-29 |
Alignm gaps (pig, cow): | 27, 79 |
Conread position: | 433-587 |
Cow position: | chr3:36100989-36100838 (view UCSC Genome Browser custom track) |
Alignm length: | 155 |
Alignm identity: | 123 |
Alignm E-value: | 5e-32 |
Alignm gaps (pig, cow): | 92, 0 |
Conread position: | 434-588 |
Cow position: | chr3:18213980-18214139 (view UCSC Genome Browser custom track) |
Alignm length: | 160 |
Alignm identity: | 117 |
Alignm E-value: | 5e-22 |
Alignm gaps (pig, cow): | 31, 0 |
Conread position: | 435-559 |
Cow position: | chr3:44838410-44838287 (view UCSC Genome Browser custom track) |
Alignm length: | 125 |
Alignm identity: | 99 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 72, 0 |
Conread position: | 435-571 |
Cow position: | chr3:56693383-56693250 (view UCSC Genome Browser custom track) |
Alignm length: | 138 |
Alignm identity: | 108 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 113, 52 |
Conread position: | 435-585 |
Cow position: | chr3:58447910-58448062 (view UCSC Genome Browser custom track) |
Alignm length: | 154 |
Alignm identity: | 114 |
Alignm E-value: | 6e-23 |
Alignm gaps (pig, cow): | 43, 71 |
Conread position: | 435-586 |
Cow position: | chr3:8752942-8752789 (view UCSC Genome Browser custom track) |
Alignm length: | 155 |
Alignm identity: | 113 |
Alignm E-value: | 5e-21 |
Alignm gaps (pig, cow): | 32, 95 |
Conread position: | 435-586 |
Cow position: | chr3:57829927-57830079 (view UCSC Genome Browser custom track) |
Alignm length: | 153 |
Alignm identity: | 119 |
Alignm E-value: | 4e-30 |
Alignm gaps (pig, cow): | 59, 0 |
Conread position: | 435-588 |
Cow position: | chr3:53588231-53588384 (view UCSC Genome Browser custom track) |
Alignm length: | 156 |
Alignm identity: | 124 |
Alignm E-value: | 1e-30 |
Alignm gaps (pig, cow): | 32, 24 |
Conread position: | 435-588 |
Cow position: | chr3:68262911-68262763 (view UCSC Genome Browser custom track) |
Alignm length: | 155 |
Alignm identity: | 117 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 134, 21 |
Conread position: | 436-583 |
Cow position: | chr3:22271300-22271450 (view UCSC Genome Browser custom track) |
Alignm length: | 153 |
Alignm identity: | 115 |
Alignm E-value: | 5e-22 |
Alignm gaps (pig, cow): | 19, 60 |
Conread position: | 436-583 |
Cow position: | chr3:58291736-58291888 (view UCSC Genome Browser custom track) |
Alignm length: | 153 |
Alignm identity: | 116 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 32, 0 |
Conread position: | 436-583 |
Cow position: | chr3:58632712-58632567 (view UCSC Genome Browser custom track) |
Alignm length: | 148 |
Alignm identity: | 111 |
Alignm E-value: | 6e-24 |
Alignm gaps (pig, cow): | 22, 0 |
Conread position: | 436-588 |
Cow position: | chr3:26088840-26089001 (view UCSC Genome Browser custom track) |
Alignm length: | 162 |
Alignm identity: | 120 |
Alignm E-value: | 5e-22 |
Alignm gaps (pig, cow): | 39, 0 |
Conread position: | 437-588 |
Cow position: | chr3:36204700-36204552 (view UCSC Genome Browser custom track) |
Alignm length: | 153 |
Alignm identity: | 126 |
Alignm E-value: | 2e-33 |
Alignm gaps (pig, cow): | 61, 18 |
Conread position: | 441-585 |
Cow position: | chr3:31932954-31933098 (view UCSC Genome Browser custom track) |
Alignm length: | 146 |
Alignm identity: | 108 |
Alignm E-value: | 5e-22 |
Alignm gaps (pig, cow): | 142, 28 |
Conread position: | 441-586 |
Cow position: | chr3:31247812-31247667 (view UCSC Genome Browser custom track) |
Alignm length: | 148 |
Alignm identity: | 114 |
Alignm E-value: | 7e-25 |
Alignm gaps (pig, cow): | 21, 30 |
Conread position: | 441-588 |
Cow position: | chr3:5601017-5601167 (view UCSC Genome Browser custom track) |
Alignm length: | 152 |
Alignm identity: | 113 |
Alignm E-value: | 5e-22 |
Alignm gaps (pig, cow): | 29, 65 |
Conread position: | 441-588 |
Cow position: | chr3:37485650-37485797 (view UCSC Genome Browser custom track) |
Alignm length: | 149 |
Alignm identity: | 111 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 106, 130 |
Conread position: | 441-588 |
Cow position: | chr3:51780845-51780991 (view UCSC Genome Browser custom track) |
Alignm length: | 152 |
Alignm identity: | 115 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 10, 67 |
Conread position: | 441-588 |
Cow position: | chr3:59608648-59608502 (view UCSC Genome Browser custom track) |
Alignm length: | 150 |
Alignm identity: | 118 |
Alignm E-value: | 9e-28 |
Alignm gaps (pig, cow): | 25, 33 |
Conread position: | 458-588 |
Cow position: | chr3:14505785-14505915 (view UCSC Genome Browser custom track) |
Alignm length: | 131 |
Alignm identity: | 107 |
Alignm E-value: | 4e-30 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 458-588 |
Cow position: | chr3:73436311-73436441 (view UCSC Genome Browser custom track) |
Alignm length: | 131 |
Alignm identity: | 106 |
Alignm E-value: | 4e-29 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 461-588 |
Cow position: | chr3:24300487-24300360 (view UCSC Genome Browser custom track) |
Alignm length: | 128 |
Alignm identity: | 102 |
Alignm E-value: | 9e-27 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 461-588 |
Cow position: | chr3:46094948-46094823 (view UCSC Genome Browser custom track) |
Alignm length: | 128 |
Alignm identity: | 107 |
Alignm E-value: | 1e-29 |
Alignm gaps (pig, cow): | 89, 0 |
Conread position: | 462-569 |
Cow position: | chr3:44643643-44643540 (view UCSC Genome Browser custom track) |
Alignm length: | 108 |
Alignm identity: | 90 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 43, 0 |
Conread position: | 462-583 |
Cow position: | chr3:5845043-5844924 (view UCSC Genome Browser custom track) |
Alignm length: | 122 |
Alignm identity: | 97 |
Alignm E-value: | 6e-23 |
Alignm gaps (pig, cow): | 11, 0 |
Conread position: | 462-583 |
Cow position: | chr3:20092400-20092521 (view UCSC Genome Browser custom track) |
Alignm length: | 122 |
Alignm identity: | 93 |
Alignm E-value: | 5e-21 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 462-583 |
Cow position: | chr3:24538998-24538877 (view UCSC Genome Browser custom track) |
Alignm length: | 122 |
Alignm identity: | 96 |
Alignm E-value: | 6e-24 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 462-583 |
Cow position: | chr3:39910934-39911054 (view UCSC Genome Browser custom track) |
Alignm length: | 122 |
Alignm identity: | 98 |
Alignm E-value: | 7e-25 |
Alignm gaps (pig, cow): | 46, 0 |
Conread position: | 462-583 |
Cow position: | chr3:70354113-70354233 (view UCSC Genome Browser custom track) |
Alignm length: | 122 |
Alignm identity: | 95 |
Alignm E-value: | 5e-22 |
Alignm gaps (pig, cow): | 75, 0 |
Conread position: | 462-587 |
Cow position: | chr3:49131936-49132063 (view UCSC Genome Browser custom track) |
Alignm length: | 128 |
Alignm identity: | 100 |
Alignm E-value: | 6e-23 |
Alignm gaps (pig, cow): | 32, 0 |
Conread position: | 462-588 |
Cow position: | chr3:3736425-3736298 (view UCSC Genome Browser custom track) |
Alignm length: | 128 |
Alignm identity: | 103 |
Alignm E-value: | 9e-27 |
Alignm gaps (pig, cow): | 55, 0 |
Conread position: | 462-588 |
Cow position: | chr3:22171499-22171377 (view UCSC Genome Browser custom track) |
Alignm length: | 127 |
Alignm identity: | 99 |
Alignm E-value: | 5e-22 |
Alignm gaps (pig, cow): | 58, 0 |
Conread position: | 462-588 |
Cow position: | chr3:34085930-34086055 (view UCSC Genome Browser custom track) |
Alignm length: | 127 |
Alignm identity: | 101 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 70, 0 |
Conread position: | 462-588 |
Cow position: | chr3:35278696-35278575 (view UCSC Genome Browser custom track) |
Alignm length: | 127 |
Alignm identity: | 100 |
Alignm E-value: | 5e-21 |
Alignm gaps (pig, cow): | 54, 0 |
Conread position: | 462-588 |
Cow position: | chr3:61116727-61116854 (view UCSC Genome Browser custom track) |
Alignm length: | 128 |
Alignm identity: | 99 |
Alignm E-value: | 6e-23 |
Alignm gaps (pig, cow): | 86, 0 |
Conread position: | 463-583 |
Cow position: | chr3:55373444-55373565 (view UCSC Genome Browser custom track) |
Alignm length: | 122 |
Alignm identity: | 97 |
Alignm E-value: | 6e-24 |
Alignm gaps (pig, cow): | 100, 0 |
Conread position: | 463-584 |
Cow position: | chr3:10431724-10431603 (view UCSC Genome Browser custom track) |
Alignm length: | 122 |
Alignm identity: | 98 |
Alignm E-value: | 8e-26 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 463-588 |
Cow position: | chr3:66707945-66708067 (view UCSC Genome Browser custom track) |
Alignm length: | 126 |
Alignm identity: | 107 |
Alignm E-value: | 1e-29 |
Alignm gaps (pig, cow): | 25, 0 |
Conread position: | 464-588 |
Cow position: | chr3:20471243-20471365 (view UCSC Genome Browser custom track) |
Alignm length: | 125 |
Alignm identity: | 97 |
Alignm E-value: | 5e-22 |
Alignm gaps (pig, cow): | 27, 0 |
Conread position: | 466-587 |
Cow position: | chr3:8457776-8457655 (view UCSC Genome Browser custom track) |
Alignm length: | 122 |
Alignm identity: | 102 |
Alignm E-value: | 1e-29 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 467-583 |
Cow position: | chr3:25251025-25250908 (view UCSC Genome Browser custom track) |
Alignm length: | 118 |
Alignm identity: | 97 |
Alignm E-value: | 8e-26 |
Alignm gaps (pig, cow): | 34, 0 |
Conread position: | 467-583 |
Cow position: | chr3:74205688-74205804 (view UCSC Genome Browser custom track) |
Alignm length: | 117 |
Alignm identity: | 93 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.