Cow genome map

Conread name: Ss1.1-Pig4-TMW8048L06.5

Conread position: 444-780
Cow position: chr12:9252649-9252981 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 89

Conread position: 445-789
Cow position: chr12:39416618-39416957 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 232
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 19, 34

Conread position: 448-716
Cow position: chr12:15164134-15163868 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 181
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 16, 70

Conread position: 448-753
Cow position: chr12:2978144-2977855 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 215
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 209, 15

Conread position: 448-756
Cow position: chr12:3075687-3075384 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 219
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 16, 91

Conread position: 448-756
Cow position: chr12:19453642-19453955 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 204
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 16, 165

Conread position: 448-769
Cow position: chr12:17322532-17322844 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 213
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 17, 51

Conread position: 448-769
Cow position: chr12:17782918-17782598 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 212
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 20, 6

Conread position: 448-780
Cow position: chr12:25940385-25940053 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 234
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 16, 70

Conread position: 448-781
Cow position: chr12:3158622-3158294 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 218
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 18, 73

Conread position: 448-781
Cow position: chr12:34490975-34490646 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 220
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 16, 72

Conread position: 448-793
Cow position: chr12:26236293-26236632 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 224
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 16, 161

Conread position: 449-754
Cow position: chr12:19915511-19915215 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 204
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 297, 14

Conread position: 450-760
Cow position: chr12:27781590-27781894 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 205
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 77, 13

Conread position: 450-785
Cow position: chr12:12877093-12876771 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 231
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 14, 148

Conread position: 450-785
Cow position: chr12:20433138-20432802 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 219
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 17, 24

Conread position: 451-794
Cow position: chr12:22133968-22133624 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 216
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 12, 166

Conread position: 451-800
Cow position: chr12:7096390-7096049 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 227
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 13, 68

Conread position: 454-658
Cow position: chr12:30136182-30136380 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 141
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 115, 9

Conread position: 454-774
Cow position: chr12:1330919-1331236 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 208
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 56, 64

Conread position: 455-769
Cow position: chr12:34876605-34876919 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 203
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 9, 64

Conread position: 455-780
Cow position: chr12:19252237-19251912 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 216
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 119, 8

Conread position: 458-754
Cow position: chr12:4782161-4781868 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 199
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 10, 59

Conread position: 463-755
Cow position: chr12:26192486-26192204 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 209
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 192, 54

Conread position: 463-756
Cow position: chr12:12297685-12297388 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 206
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 110, 151

Conread position: 471-772
Cow position: chr12:25531641-25531949 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 204
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 70, 142

Conread position: 473-750
Cow position: chr12:40796961-40797241 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 184
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 54, 46

Conread position: 473-757
Cow position: chr12:19221610-19221326 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 196
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 95, 8

Conread position: 473-767
Cow position: chr12:24537946-24538230 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 204
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 100, 37

Conread position: 476-768
Cow position: chr12:30031782-30031494 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 208
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 91, 113

Conread position: 477-715
Cow position: chr12:44368871-44369107 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 158
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 96, 25

Conread position: 478-729
Cow position: chr12:37095553-37095805 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 167
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 56, 40

Conread position: 479-756
Cow position: chr12:21186711-21186452 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 190
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 176, 39

Conread position: 486-746
Cow position: chr12:3828358-3828612 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 178
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 133, 65

Conread position: 489-752
Cow position: chr12:37516330-37516067 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 174
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 80, 117

Conread position: 489-785
Cow position: chr12:34515932-34515630 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 205
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 79, 127

Conread position: 490-775
Cow position: chr12:22213812-22213526 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 185
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 83, 124

Conread position: 494-741
Cow position: chr12:5901412-5901660 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 168
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 79, 204

Conread position: 494-760
Cow position: chr12:16251409-16251667 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 186
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 165, 25

Conread position: 497-756
Cow position: chr12:40647992-40648246 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 170
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 29, 117

Conread position: 500-769
Cow position: chr12:34788771-34788501 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 181
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 73, 106

Conread position: 500-774
Cow position: chr12:31035459-31035733 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 182
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 59, 115

Conread position: 500-774
Cow position: chr12:40248259-40248533 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 185
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 27, 18

Conread position: 502-758
Cow position: chr12:3705719-3705971 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 172
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 9, 39

Conread position: 510-772
Cow position: chr12:8889230-8888974 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 185
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 149, 63

Conread position: 520-760
Cow position: chr12:34414598-34414837 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 166
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 53, 94

Conread position: 520-781
Cow position: chr12:6664627-6664365 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 182
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 53, 94

Conread position: 530-786
Cow position: chr12:37180609-37180864 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 176
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 46, 90

Conread position: 531-761
Cow position: chr12:8874689-8874458 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 156
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 43, 83

Conread position: 535-780
Cow position: chr12:28429366-28429119 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 176
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 5, 80

Conread position: 543-755
Cow position: chr12:8168450-8168667 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 154
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 25, 76

Conread position: 573-797
Cow position: chr12:6118931-6118714 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 161
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 81, 39

Conread position: 576-756
Cow position: chr12:40172256-40172078 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 128
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 67, 37

Conread position: 586-781
Cow position: chr12:30597481-30597286 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 135
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 74, 27

Conread position: 592-796
Cow position: chr12:23787060-23786856 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 150
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 63, 21

Conread position: 600-769
Cow position: chr12:30570577-30570745 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 128
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 55, 13

Conread position: 608-795
Cow position: chr12:35303392-35303571 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 136
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 46, 57

Show alignments to all cow chromosomes.