Cow genome map

Conread name: Ss1.1-Pig4-TMW8048L06.5

Conread position: 441-737
Cow position: chr13:44713293-44712993 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 207
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 6, 84

Conread position: 444-712
Cow position: chr13:30037460-30037727 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 184
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 25, 154

Conread position: 445-756
Cow position: chr13:56463715-56463419 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 218
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 213, 18

Conread position: 446-785
Cow position: chr13:32803368-32803025 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 230
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 10, 149

Conread position: 447-676
Cow position: chr13:49149701-49149470 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 161
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 16, 41

Conread position: 447-767
Cow position: chr13:48608214-48608536 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 304

Conread position: 447-773
Cow position: chr13:48763769-48763417 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 241
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 17, 267

Conread position: 447-781
Cow position: chr13:1915648-1915315 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 218
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 31, 61

Conread position: 447-785
Cow position: chr13:20977268-20976929 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 222
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 22, 73

Conread position: 448-718
Cow position: chr13:44991752-44991488 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 184
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 15, 155

Conread position: 448-733
Cow position: chr13:46641457-46641742 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 200
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 16, 73

Conread position: 448-740
Cow position: chr13:2867288-2866998 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 201
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 16, 83

Conread position: 448-749
Cow position: chr13:46922363-46922072 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 204
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 16, 120

Conread position: 448-756
Cow position: chr13:5656778-5656473 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 218
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 16, 107

Conread position: 448-756
Cow position: chr13:18144009-18144317 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 203
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 20, 15

Conread position: 448-769
Cow position: chr13:17378277-17378589 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 223
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 119, 15

Conread position: 448-769
Cow position: chr13:62379728-62379411 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 213
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 8, 37

Conread position: 448-781
Cow position: chr13:2833188-2832855 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 233
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 15, 71

Conread position: 448-781
Cow position: chr13:47850680-47850347 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 224
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 15, 98

Conread position: 448-781
Cow position: chr13:49355554-49355880 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 223
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 16, 40

Conread position: 448-782
Cow position: chr13:20511847-20512178 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 216
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 16, 144

Conread position: 448-785
Cow position: chr13:52799757-52800083 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 233
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 16, 32

Conread position: 448-802
Cow position: chr13:52278449-52278106 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 240
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 16, 128

Conread position: 449-738
Cow position: chr13:26024944-26025228 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 199
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 54, 164

Conread position: 449-753
Cow position: chr13:59125136-59124841 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 208
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 14, 51

Conread position: 449-769
Cow position: chr13:52321596-52321284 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 219
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 26, 14

Conread position: 450-708
Cow position: chr13:44922975-44923234 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 181
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 17, 187

Conread position: 450-732
Cow position: chr13:11051773-11051487 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 194
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 15, 69

Conread position: 450-749
Cow position: chr13:9559463-9559175 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 202
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 14, 166

Conread position: 450-754
Cow position: chr13:14827971-14827664 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 199
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 8, 22

Conread position: 450-769
Cow position: chr13:33971553-33971865 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 209
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 15, 69

Conread position: 450-769
Cow position: chr13:40189063-40188752 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 220
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 14, 65

Conread position: 450-791
Cow position: chr13:1741117-1741450 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 241
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 13, 124

Conread position: 451-769
Cow position: chr13:48550224-48550532 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 219
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 13, 101

Conread position: 451-785
Cow position: chr13:52017109-52016773 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 236
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 13, 121

Conread position: 451-795
Cow position: chr13:22569050-22568709 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 228
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 13, 164

Conread position: 454-794
Cow position: chr13:46996895-46996559 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 218
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 13, 80

Conread position: 455-755
Cow position: chr13:42896530-42896830 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 205
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 9, 27

Conread position: 455-784
Cow position: chr13:8333494-8333169 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 221
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 8, 74

Conread position: 455-803
Cow position: chr13:9298208-9298549 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 245
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 9, 111

Conread position: 456-750
Cow position: chr13:46496039-46495744 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 205
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 72, 62

Conread position: 456-775
Cow position: chr13:21855951-21856263 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 205
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 13, 47

Conread position: 456-801
Cow position: chr13:60032065-60031717 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 227
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 8, 26

Conread position: 457-781
Cow position: chr13:41901907-41901579 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 115

Conread position: 462-748
Cow position: chr13:41703446-41703736 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 192
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 56, 154

Conread position: 462-803
Cow position: chr13:49286052-49286388 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 235
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 52, 146

Conread position: 463-724
Cow position: chr13:11454694-11454940 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 183
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 192, 82

Conread position: 463-781
Cow position: chr13:41255194-41254873 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 224
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 23, 110

Conread position: 464-781
Cow position: chr13:52932261-52931943 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 210
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 109, 76

Conread position: 465-723
Cow position: chr13:9084170-9084426 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 167
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 193, 33

Conread position: 466-795
Cow position: chr13:2546703-2547031 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 219
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 105, 128

Conread position: 472-715
Cow position: chr13:14863405-14863162 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 158
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 186, 104

Conread position: 473-756
Cow position: chr13:12912397-12912115 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 199
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 100, 135

Conread position: 474-756
Cow position: chr13:22701640-22701917 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 197
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 181, 62

Conread position: 474-760
Cow position: chr13:19730711-19730427 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 200
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 102, 27

Conread position: 475-728
Cow position: chr13:45171833-45172086 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 170
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 153, 22

Conread position: 475-785
Cow position: chr13:30081207-30080900 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 207
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 98, 139

Conread position: 478-781
Cow position: chr13:28094218-28093914 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 202
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 63, 139

Conread position: 479-756
Cow position: chr13:50790228-50790515 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 191
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 56, 144

Conread position: 486-781
Cow position: chr13:53856902-53856610 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 206
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 45, 33

Conread position: 487-772
Cow position: chr13:18977549-18977276 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 194
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 90, 14

Conread position: 487-802
Cow position: chr13:37312765-37312461 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 204
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 86, 127

Conread position: 488-760
Cow position: chr13:45132194-45131930 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 196
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 165, 31

Conread position: 488-786
Cow position: chr13:20711710-20712006 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 196
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 24, 13

Conread position: 489-728
Cow position: chr13:44389947-44390183 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 172
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 39, 30

Conread position: 489-748
Cow position: chr13:33620838-33621105 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 174
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 84, 125

Conread position: 489-754
Cow position: chr13:23211616-23211874 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 177
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 144, 55

Conread position: 489-756
Cow position: chr13:37636360-37636093 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 181
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 87, 125

Conread position: 490-781
Cow position: chr13:58179851-58179559 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 199
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 57, 65

Conread position: 490-795
Cow position: chr13:60026476-60026172 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 206
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 18, 130

Conread position: 490-797
Cow position: chr13:4429211-4428908 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 198
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 76, 29

Conread position: 491-768
Cow position: chr13:27737796-27738068 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 188
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 80, 49

Conread position: 491-784
Cow position: chr13:46586772-46587063 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 201
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 82, 29

Conread position: 494-771
Cow position: chr13:35008644-35008921 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 195
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 33, 25

Conread position: 497-756
Cow position: chr13:41654395-41654655 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 178
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 46, 58

Conread position: 497-756
Cow position: chr13:44700732-44700993 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 171
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 71, 243

Conread position: 497-781
Cow position: chr13:21277481-21277203 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 184
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 76, 54

Conread position: 500-775
Cow position: chr13:47473261-47472988 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 187
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 35, 98

Conread position: 502-756
Cow position: chr13:59454536-59454790 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 170
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 25, 16

Conread position: 507-749
Cow position: chr13:43034810-43035043 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 165
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 148, 13

Conread position: 507-785
Cow position: chr13:33587767-33587490 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 188
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 65, 109

Conread position: 513-760
Cow position: chr13:21047810-21047560 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 177
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 106, 5

Conread position: 536-779
Cow position: chr13:59916916-59916670 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 174
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 37, 0

Conread position: 537-785
Cow position: chr13:56244996-56244751 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 179
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 36, 79

Conread position: 549-750
Cow position: chr13:15255566-15255765 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 148
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 24, 67

Conread position: 553-755
Cow position: chr13:44659244-44659045 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 140
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 21, 61

Conread position: 553-781
Cow position: chr13:46221773-46222002 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 159
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 20, 27

Conread position: 553-784
Cow position: chr13:38352176-38351950 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 158
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 104, 21

Conread position: 553-801
Cow position: chr13:58029137-58029382 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 176
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 20, 65

Conread position: 557-761
Cow position: chr13:57850993-57851198 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 146
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 13, 57

Conread position: 557-774
Cow position: chr13:30484812-30484597 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 149
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 20, 37

Conread position: 585-781
Cow position: chr13:44223064-44222873 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 141
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 28, 0

Conread position: 586-796
Cow position: chr13:22360666-22360873 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 144
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 160, 27

Conread position: 587-769
Cow position: chr13:38936501-38936320 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 127
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 74, 28

Conread position: 588-741
Cow position: chr13:34089870-34090021 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 117
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 67, 25

Conread position: 589-794
Cow position: chr13:57893503-57893705 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 147
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 137, 50

Conread position: 591-780
Cow position: chr13:44568634-44568446 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 136
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 64, 22

Conread position: 596-791
Cow position: chr13:22489595-22489794 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 140
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 13, 0

Conread position: 606-801
Cow position: chr13:32842039-32842229 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 141
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 49, 34

Conread position: 643-781
Cow position: chr13:23653512-23653373 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 107
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 15, 0

Show alignments to all cow chromosomes.