Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8048L06.5
        

               Conread position:
               444-786
               

               Cow position:
               
               

               Alignm length:
               345
               

               Alignm identity:
               232
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               132, 53
               

               Conread position:
               447-779
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               206
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               14, 171
               

               Conread position:
               448-639
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               136
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               17, 70
               

               Conread position:
               448-752
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               199
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               15, 69
               

               Conread position:
               448-753
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               213
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               16, 186
               

               Conread position:
               448-753
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               219
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               16, 100
               

               Conread position:
               448-754
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               217
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               15, 71
               

               Conread position:
               448-755
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               221
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               79, 15
               

               Conread position:
               448-756
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               209
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               17, 139
               

               Conread position:
               448-760
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               206
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               16, 47
               

               Conread position:
               448-761
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               207
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               15, 184
               

               Conread position:
               448-769
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               215
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               77, 15
               

               Conread position:
               448-781
               

               Cow position:
               
               

               Alignm length:
               345
               

               Alignm identity:
               233
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               16, 151
               

               Conread position:
               448-781
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               233
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               85, 6
               

               Conread position:
               448-781
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               225
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               16, 162
               

               Conread position:
               448-794
               

               Cow position:
               
               

               Alignm length:
               348
               

               Alignm identity:
               236
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               120, 16
               

               Conread position:
               448-795
               

               Cow position:
               
               

               Alignm length:
               352
               

               Alignm identity:
               230
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               15, 5
               

               Conread position:
               449-786
               

               Cow position:
               
               

               Alignm length:
               343
               

               Alignm identity:
               213
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               15, 162
               

               Conread position:
               450-710
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               19, 70
               

               Conread position:
               450-748
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               209
               

               Alignm E-value:
               8.99999e-40
               

               Alignm gaps (pig, cow):
               14, 133
               

               Conread position:
               450-755
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               202
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               14, 33
               

               Conread position:
               450-756
               

               Cow position:
               
               

               Alignm length:
               313
               

               Alignm identity:
               207
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               14, 133
               

               Conread position:
               450-756
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               211
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               15, 237
               

               Conread position:
               450-759
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               202
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               19, 165
               

               Conread position:
               450-759
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               214
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               17, 67
               

               Conread position:
               450-780
               

               Cow position:
               
               

               Alignm length:
               333
               

               Alignm identity:
               233
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 33
               

               Conread position:
               450-791
               

               Cow position:
               
               

               Alignm length:
               352
               

               Alignm identity:
               231
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               14, 89
               

               Conread position:
               451-759
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               215
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               49, 12
               

               Conread position:
               451-804
               

               Cow position:
               
               

               Alignm length:
               356
               

               Alignm identity:
               231
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               68, 78
               

               Conread position:
               452-749
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               209
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               13, 166
               

               Conread position:
               452-750
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               190
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               12, 53
               

               Conread position:
               454-769
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               223
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               10, 98
               

               Conread position:
               455-769
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               207
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               71, 8
               

               Conread position:
               455-774
               

               Cow position:
               
               

               Alignm length:
               330
               

               Alignm identity:
               221
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               9, 24
               

               Conread position:
               455-794
               

               Cow position:
               
               

               Alignm length:
               349
               

               Alignm identity:
               234
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               10, 138
               

               Conread position:
               456-753
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               203
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               9, 218
               

               Conread position:
               456-769
               

               Cow position:
               
               

               Alignm length:
               321
               

               Alignm identity:
               210
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               46, 98
               

               Conread position:
               457-754
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               197
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               71, 24
               

               Conread position:
               457-756
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               204
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               116, 79
               

               Conread position:
               463-756
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               203
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               110, 18
               

               Conread position:
               463-768
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               193
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               196, 112
               

               Conread position:
               464-677
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               109, 144
               

               Conread position:
               466-752
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               194
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               75, 7
               

               Conread position:
               468-769
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               215
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               41, 69
               

               Conread position:
               468-803
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               213
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               105, 137
               

               Conread position:
               472-732
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               179
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               61, 30
               

               Conread position:
               473-697
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               157
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               162, 74
               

               Conread position:
               473-734
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               180
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               182, 139
               

               Conread position:
               473-794
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               211
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               185, 94
               

               Conread position:
               473-797
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               217
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               181, 40
               

               Conread position:
               474-750
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               186
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               99, 87
               

               Conread position:
               474-785
               

               Cow position:
               
               

               Alignm length:
               321
               

               Alignm identity:
               210
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               115, 96
               

               Conread position:
               477-707
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               51, 41
               

               Conread position:
               479-754
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               182
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               94, 163
               

               Conread position:
               479-781
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               199
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               94, 135
               

               Conread position:
               487-754
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               177
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               87, 0
               

               Conread position:
               487-760
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               188
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               39, 11
               

               Conread position:
               488-760
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               182
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               170, 79
               

               Conread position:
               489-724
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               159
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               87, 20
               

               Conread position:
               489-781
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               195
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               47, 23
               

               Conread position:
               489-781
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               198
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               27, 31
               

               Conread position:
               489-785
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               199
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               38, 30
               

               Conread position:
               489-791
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               203
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               84, 29
               

               Conread position:
               490-781
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               189
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               38, 28
               

               Conread position:
               491-781
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               185
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               49, 27
               

               Conread position:
               500-784
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               193
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               157, 63
               

               Conread position:
               505-767
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               173
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               27, 14
               

               Conread position:
               505-774
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               178
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               66, 13
               

               Conread position:
               511-788
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               201
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               65, 94
               

               Conread position:
               512-778
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               183
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               61, 102
               

               Conread position:
               514-778
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               57, 180
               

               Conread position:
               518-723
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               20, 98
               

               Conread position:
               520-756
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               160
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               51, 94
               

               Conread position:
               526-802
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               196
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               51, 70
               

               Conread position:
               528-781
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               186
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               131, 85
               

               Conread position:
               540-691
               

               Cow position:
               
               

               Alignm length:
               154
               

               Alignm identity:
               114
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               33, 74
               

               Conread position:
               560-802
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               176
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               95, 25
               

               Conread position:
               576-781
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               79, 37
               

               Conread position:
               585-792
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               142
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               74, 10
               

               Conread position:
               588-780
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               137
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               67, 25
               

               Conread position:
               604-724
               

               Cow position:
               
               

               Alignm length:
               122
               

               Alignm identity:
               96
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               56, 32
               

               Conread position:
               606-781
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               607-769
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               120
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               608-781
               

               Cow position:
               
               

               Alignm length:
               175
               

               Alignm identity:
               131
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               644-781
               

               Cow position:
               
               

               Alignm length:
               139
               

               Alignm identity:
               108
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               15, 79
               
Show alignments to all cow chromosomes.