Cow genome map
Conread name: | Ss1.1-Pig4-TMW8048L06.5 |
Conread position: | 444-786 |
Cow position: | chr21:11326949-11326615 (view UCSC Genome Browser custom track) |
Alignm length: | 345 |
Alignm identity: | 232 |
Alignm E-value: | 7e-38 |
Alignm gaps (pig, cow): | 132, 53 |
Conread position: | 447-779 |
Cow position: | chr21:12440621-12440956 (view UCSC Genome Browser custom track) |
Alignm length: | 337 |
Alignm identity: | 206 |
Alignm E-value: | 4e-22 |
Alignm gaps (pig, cow): | 14, 171 |
Conread position: | 448-639 |
Cow position: | chr21:1613872-1613681 (view UCSC Genome Browser custom track) |
Alignm length: | 195 |
Alignm identity: | 136 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 17, 70 |
Conread position: | 448-752 |
Cow position: | chr21:170840-171142 (view UCSC Genome Browser custom track) |
Alignm length: | 309 |
Alignm identity: | 199 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 15, 69 |
Conread position: | 448-753 |
Cow position: | chr21:15933349-15933674 (view UCSC Genome Browser custom track) |
Alignm length: | 327 |
Alignm identity: | 213 |
Alignm E-value: | 4e-22 |
Alignm gaps (pig, cow): | 16, 186 |
Conread position: | 448-753 |
Cow position: | chr21:35779528-35779226 (view UCSC Genome Browser custom track) |
Alignm length: | 309 |
Alignm identity: | 219 |
Alignm E-value: | 1.96182e-44 |
Alignm gaps (pig, cow): | 16, 100 |
Conread position: | 448-754 |
Cow position: | chr21:16480941-16480633 (view UCSC Genome Browser custom track) |
Alignm length: | 311 |
Alignm identity: | 217 |
Alignm E-value: | 9.94922e-44 |
Alignm gaps (pig, cow): | 15, 71 |
Conread position: | 448-755 |
Cow position: | chr21:13532219-13531911 (view UCSC Genome Browser custom track) |
Alignm length: | 315 |
Alignm identity: | 221 |
Alignm E-value: | 3e-39 |
Alignm gaps (pig, cow): | 79, 15 |
Conread position: | 448-756 |
Cow position: | chr21:17794527-17794219 (view UCSC Genome Browser custom track) |
Alignm length: | 312 |
Alignm identity: | 209 |
Alignm E-value: | 2e-35 |
Alignm gaps (pig, cow): | 17, 139 |
Conread position: | 448-760 |
Cow position: | chr21:17168575-17168897 (view UCSC Genome Browser custom track) |
Alignm length: | 324 |
Alignm identity: | 206 |
Alignm E-value: | 5e-23 |
Alignm gaps (pig, cow): | 16, 47 |
Conread position: | 448-761 |
Cow position: | chr21:4178037-4177723 (view UCSC Genome Browser custom track) |
Alignm length: | 318 |
Alignm identity: | 207 |
Alignm E-value: | 3e-30 |
Alignm gaps (pig, cow): | 15, 184 |
Conread position: | 448-769 |
Cow position: | chr21:28173585-28173271 (view UCSC Genome Browser custom track) |
Alignm length: | 325 |
Alignm identity: | 215 |
Alignm E-value: | 9e-30 |
Alignm gaps (pig, cow): | 77, 15 |
Conread position: | 448-781 |
Cow position: | chr21:29653607-29653944 (view UCSC Genome Browser custom track) |
Alignm length: | 345 |
Alignm identity: | 233 |
Alignm E-value: | 2e-34 |
Alignm gaps (pig, cow): | 16, 151 |
Conread position: | 448-781 |
Cow position: | chr21:34548007-34547678 (view UCSC Genome Browser custom track) |
Alignm length: | 341 |
Alignm identity: | 233 |
Alignm E-value: | 2e-37 |
Alignm gaps (pig, cow): | 85, 6 |
Conread position: | 448-781 |
Cow position: | chr21:34618054-34618390 (view UCSC Genome Browser custom track) |
Alignm length: | 338 |
Alignm identity: | 225 |
Alignm E-value: | 3e-39 |
Alignm gaps (pig, cow): | 16, 162 |
Conread position: | 448-794 |
Cow position: | chr21:46598859-46598518 (view UCSC Genome Browser custom track) |
Alignm length: | 348 |
Alignm identity: | 236 |
Alignm E-value: | 3.9937e-43 |
Alignm gaps (pig, cow): | 120, 16 |
Conread position: | 448-795 |
Cow position: | chr21:36070598-36070251 (view UCSC Genome Browser custom track) |
Alignm length: | 352 |
Alignm identity: | 230 |
Alignm E-value: | 2e-34 |
Alignm gaps (pig, cow): | 15, 5 |
Conread position: | 449-786 |
Cow position: | chr21:42659471-42659133 (view UCSC Genome Browser custom track) |
Alignm length: | 343 |
Alignm identity: | 213 |
Alignm E-value: | 5e-23 |
Alignm gaps (pig, cow): | 15, 162 |
Conread position: | 450-710 |
Cow position: | chr21:13533603-13533868 (view UCSC Genome Browser custom track) |
Alignm length: | 268 |
Alignm identity: | 177 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 19, 70 |
Conread position: | 450-748 |
Cow position: | chr21:2906228-2905928 (view UCSC Genome Browser custom track) |
Alignm length: | 303 |
Alignm identity: | 209 |
Alignm E-value: | 8.99999e-40 |
Alignm gaps (pig, cow): | 14, 133 |
Conread position: | 450-755 |
Cow position: | chr21:35643483-35643183 (view UCSC Genome Browser custom track) |
Alignm length: | 309 |
Alignm identity: | 202 |
Alignm E-value: | 8e-28 |
Alignm gaps (pig, cow): | 14, 33 |
Conread position: | 450-756 |
Cow position: | chr21:10156582-10156278 (view UCSC Genome Browser custom track) |
Alignm length: | 313 |
Alignm identity: | 207 |
Alignm E-value: | 2e-26 |
Alignm gaps (pig, cow): | 14, 133 |
Conread position: | 450-756 |
Cow position: | chr21:39931792-39931486 (view UCSC Genome Browser custom track) |
Alignm length: | 311 |
Alignm identity: | 211 |
Alignm E-value: | 7e-37 |
Alignm gaps (pig, cow): | 15, 237 |
Conread position: | 450-759 |
Cow position: | chr21:20234600-20234294 (view UCSC Genome Browser custom track) |
Alignm length: | 314 |
Alignm identity: | 202 |
Alignm E-value: | 5e-24 |
Alignm gaps (pig, cow): | 19, 165 |
Conread position: | 450-759 |
Cow position: | chr21:40083475-40083768 (view UCSC Genome Browser custom track) |
Alignm length: | 314 |
Alignm identity: | 214 |
Alignm E-value: | 9e-29 |
Alignm gaps (pig, cow): | 17, 67 |
Conread position: | 450-780 |
Cow position: | chr21:4860487-4860163 (view UCSC Genome Browser custom track) |
Alignm length: | 333 |
Alignm identity: | 233 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 13, 33 |
Conread position: | 450-791 |
Cow position: | chr21:39385521-39385186 (view UCSC Genome Browser custom track) |
Alignm length: | 352 |
Alignm identity: | 231 |
Alignm E-value: | 6e-25 |
Alignm gaps (pig, cow): | 14, 89 |
Conread position: | 451-759 |
Cow position: | chr21:7696941-7697247 (view UCSC Genome Browser custom track) |
Alignm length: | 316 |
Alignm identity: | 215 |
Alignm E-value: | 4e-32 |
Alignm gaps (pig, cow): | 49, 12 |
Conread position: | 451-804 |
Cow position: | chr21:1263939-1264285 (view UCSC Genome Browser custom track) |
Alignm length: | 356 |
Alignm identity: | 231 |
Alignm E-value: | 4e-32 |
Alignm gaps (pig, cow): | 68, 78 |
Conread position: | 452-749 |
Cow position: | chr21:12313978-12314279 (view UCSC Genome Browser custom track) |
Alignm length: | 304 |
Alignm identity: | 209 |
Alignm E-value: | 8e-39 |
Alignm gaps (pig, cow): | 13, 166 |
Conread position: | 452-750 |
Cow position: | chr21:25179902-25179607 (view UCSC Genome Browser custom track) |
Alignm length: | 301 |
Alignm identity: | 190 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 12, 53 |
Conread position: | 454-769 |
Cow position: | chr21:21126552-21126858 (view UCSC Genome Browser custom track) |
Alignm length: | 318 |
Alignm identity: | 223 |
Alignm E-value: | 3.99931e-42 |
Alignm gaps (pig, cow): | 10, 98 |
Conread position: | 455-769 |
Cow position: | chr21:13275559-13275869 (view UCSC Genome Browser custom track) |
Alignm length: | 318 |
Alignm identity: | 207 |
Alignm E-value: | 8e-28 |
Alignm gaps (pig, cow): | 71, 8 |
Conread position: | 455-774 |
Cow position: | chr21:5593307-5592981 (view UCSC Genome Browser custom track) |
Alignm length: | 330 |
Alignm identity: | 221 |
Alignm E-value: | 5e-34 |
Alignm gaps (pig, cow): | 9, 24 |
Conread position: | 455-794 |
Cow position: | chr21:36620474-36620144 (view UCSC Genome Browser custom track) |
Alignm length: | 349 |
Alignm identity: | 234 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 10, 138 |
Conread position: | 456-753 |
Cow position: | chr21:2206671-2206376 (view UCSC Genome Browser custom track) |
Alignm length: | 301 |
Alignm identity: | 203 |
Alignm E-value: | 2e-34 |
Alignm gaps (pig, cow): | 9, 218 |
Conread position: | 456-769 |
Cow position: | chr21:41538873-41539192 (view UCSC Genome Browser custom track) |
Alignm length: | 321 |
Alignm identity: | 210 |
Alignm E-value: | 4e-31 |
Alignm gaps (pig, cow): | 46, 98 |
Conread position: | 457-754 |
Cow position: | chr21:22846363-22846655 (view UCSC Genome Browser custom track) |
Alignm length: | 302 |
Alignm identity: | 197 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 71, 24 |
Conread position: | 457-756 |
Cow position: | chr21:25630433-25630729 (view UCSC Genome Browser custom track) |
Alignm length: | 301 |
Alignm identity: | 204 |
Alignm E-value: | 7e-37 |
Alignm gaps (pig, cow): | 116, 79 |
Conread position: | 463-756 |
Cow position: | chr21:30327811-30328093 (view UCSC Genome Browser custom track) |
Alignm length: | 296 |
Alignm identity: | 203 |
Alignm E-value: | 1e-30 |
Alignm gaps (pig, cow): | 110, 18 |
Conread position: | 463-768 |
Cow position: | chr21:37176011-37176311 (view UCSC Genome Browser custom track) |
Alignm length: | 307 |
Alignm identity: | 193 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 196, 112 |
Conread position: | 464-677 |
Cow position: | chr21:22491626-22491834 (view UCSC Genome Browser custom track) |
Alignm length: | 216 |
Alignm identity: | 150 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 109, 144 |
Conread position: | 466-752 |
Cow position: | chr21:18052606-18052329 (view UCSC Genome Browser custom track) |
Alignm length: | 290 |
Alignm identity: | 194 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 75, 7 |
Conread position: | 468-769 |
Cow position: | chr21:18336745-18336443 (view UCSC Genome Browser custom track) |
Alignm length: | 316 |
Alignm identity: | 215 |
Alignm E-value: | 6e-25 |
Alignm gaps (pig, cow): | 41, 69 |
Conread position: | 468-803 |
Cow position: | chr21:42633960-42633633 (view UCSC Genome Browser custom track) |
Alignm length: | 338 |
Alignm identity: | 213 |
Alignm E-value: | 5e-23 |
Alignm gaps (pig, cow): | 105, 137 |
Conread position: | 472-732 |
Cow position: | chr21:11243597-11243853 (view UCSC Genome Browser custom track) |
Alignm length: | 264 |
Alignm identity: | 179 |
Alignm E-value: | 2e-26 |
Alignm gaps (pig, cow): | 61, 30 |
Conread position: | 473-697 |
Cow position: | chr21:36023933-36024154 (view UCSC Genome Browser custom track) |
Alignm length: | 227 |
Alignm identity: | 157 |
Alignm E-value: | 6e-26 |
Alignm gaps (pig, cow): | 162, 74 |
Conread position: | 473-734 |
Cow position: | chr21:26421972-26421708 (view UCSC Genome Browser custom track) |
Alignm length: | 268 |
Alignm identity: | 180 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 182, 139 |
Conread position: | 473-794 |
Cow position: | chr21:15468605-15468295 (view UCSC Genome Browser custom track) |
Alignm length: | 323 |
Alignm identity: | 211 |
Alignm E-value: | 7e-27 |
Alignm gaps (pig, cow): | 185, 94 |
Conread position: | 473-797 |
Cow position: | chr21:29078864-29078550 (view UCSC Genome Browser custom track) |
Alignm length: | 326 |
Alignm identity: | 217 |
Alignm E-value: | 1e-31 |
Alignm gaps (pig, cow): | 181, 40 |
Conread position: | 474-750 |
Cow position: | chr21:28006515-28006234 (view UCSC Genome Browser custom track) |
Alignm length: | 284 |
Alignm identity: | 186 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 99, 87 |
Conread position: | 474-785 |
Cow position: | chr21:35815939-35816249 (view UCSC Genome Browser custom track) |
Alignm length: | 321 |
Alignm identity: | 210 |
Alignm E-value: | 5e-24 |
Alignm gaps (pig, cow): | 115, 96 |
Conread position: | 477-707 |
Cow position: | chr21:29634291-29634524 (view UCSC Genome Browser custom track) |
Alignm length: | 236 |
Alignm identity: | 163 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 51, 41 |
Conread position: | 479-754 |
Cow position: | chr21:43320572-43320846 (view UCSC Genome Browser custom track) |
Alignm length: | 280 |
Alignm identity: | 182 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 94, 163 |
Conread position: | 479-781 |
Cow position: | chr21:40178089-40178391 (view UCSC Genome Browser custom track) |
Alignm length: | 304 |
Alignm identity: | 199 |
Alignm E-value: | 1e-33 |
Alignm gaps (pig, cow): | 94, 135 |
Conread position: | 487-754 |
Cow position: | chr21:12271308-12271570 (view UCSC Genome Browser custom track) |
Alignm length: | 268 |
Alignm identity: | 177 |
Alignm E-value: | 7e-27 |
Alignm gaps (pig, cow): | 87, 0 |
Conread position: | 487-760 |
Cow position: | chr21:4461120-4460846 (view UCSC Genome Browser custom track) |
Alignm length: | 279 |
Alignm identity: | 188 |
Alignm E-value: | 9e-29 |
Alignm gaps (pig, cow): | 39, 11 |
Conread position: | 488-760 |
Cow position: | chr21:39764018-39763751 (view UCSC Genome Browser custom track) |
Alignm length: | 274 |
Alignm identity: | 182 |
Alignm E-value: | 7e-27 |
Alignm gaps (pig, cow): | 170, 79 |
Conread position: | 489-724 |
Cow position: | chr21:20774676-20774905 (view UCSC Genome Browser custom track) |
Alignm length: | 237 |
Alignm identity: | 159 |
Alignm E-value: | 4e-22 |
Alignm gaps (pig, cow): | 87, 20 |
Conread position: | 489-781 |
Cow position: | chr21:8219562-8219854 (view UCSC Genome Browser custom track) |
Alignm length: | 299 |
Alignm identity: | 195 |
Alignm E-value: | 5e-24 |
Alignm gaps (pig, cow): | 47, 23 |
Conread position: | 489-781 |
Cow position: | chr21:43352198-43351906 (view UCSC Genome Browser custom track) |
Alignm length: | 297 |
Alignm identity: | 198 |
Alignm E-value: | 1e-30 |
Alignm gaps (pig, cow): | 27, 31 |
Conread position: | 489-785 |
Cow position: | chr21:38943946-38943663 (view UCSC Genome Browser custom track) |
Alignm length: | 299 |
Alignm identity: | 199 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 38, 30 |
Conread position: | 489-791 |
Cow position: | chr21:876129-876431 (view UCSC Genome Browser custom track) |
Alignm length: | 305 |
Alignm identity: | 203 |
Alignm E-value: | 5e-35 |
Alignm gaps (pig, cow): | 84, 29 |
Conread position: | 490-781 |
Cow position: | chr21:34591476-34591182 (view UCSC Genome Browser custom track) |
Alignm length: | 296 |
Alignm identity: | 189 |
Alignm E-value: | 6e-25 |
Alignm gaps (pig, cow): | 38, 28 |
Conread position: | 491-781 |
Cow position: | chr21:31449351-31449061 (view UCSC Genome Browser custom track) |
Alignm length: | 294 |
Alignm identity: | 185 |
Alignm E-value: | 4e-21 |
Alignm gaps (pig, cow): | 49, 27 |
Conread position: | 500-784 |
Cow position: | chr21:15944220-15944492 (view UCSC Genome Browser custom track) |
Alignm length: | 286 |
Alignm identity: | 193 |
Alignm E-value: | 8e-28 |
Alignm gaps (pig, cow): | 157, 63 |
Conread position: | 505-767 |
Cow position: | chr21:6297683-6297945 (view UCSC Genome Browser custom track) |
Alignm length: | 266 |
Alignm identity: | 173 |
Alignm E-value: | 5e-23 |
Alignm gaps (pig, cow): | 27, 14 |
Conread position: | 505-774 |
Cow position: | chr21:39081318-39081048 (view UCSC Genome Browser custom track) |
Alignm length: | 274 |
Alignm identity: | 178 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 66, 13 |
Conread position: | 511-788 |
Cow position: | chr21:13133243-13132960 (view UCSC Genome Browser custom track) |
Alignm length: | 286 |
Alignm identity: | 201 |
Alignm E-value: | 7e-38 |
Alignm gaps (pig, cow): | 65, 94 |
Conread position: | 512-778 |
Cow position: | chr21:42908300-42908036 (view UCSC Genome Browser custom track) |
Alignm length: | 269 |
Alignm identity: | 183 |
Alignm E-value: | 4e-31 |
Alignm gaps (pig, cow): | 61, 102 |
Conread position: | 514-778 |
Cow position: | chr21:41866495-41866230 (view UCSC Genome Browser custom track) |
Alignm length: | 268 |
Alignm identity: | 177 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 57, 180 |
Conread position: | 518-723 |
Cow position: | chr21:34394787-34394582 (view UCSC Genome Browser custom track) |
Alignm length: | 209 |
Alignm identity: | 143 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 20, 98 |
Conread position: | 520-756 |
Cow position: | chr21:9574440-9574207 (view UCSC Genome Browser custom track) |
Alignm length: | 239 |
Alignm identity: | 160 |
Alignm E-value: | 5e-23 |
Alignm gaps (pig, cow): | 51, 94 |
Conread position: | 526-802 |
Cow position: | chr21:27551709-27551440 (view UCSC Genome Browser custom track) |
Alignm length: | 279 |
Alignm identity: | 196 |
Alignm E-value: | 2e-34 |
Alignm gaps (pig, cow): | 51, 70 |
Conread position: | 528-781 |
Cow position: | chr21:31500005-31500271 (view UCSC Genome Browser custom track) |
Alignm length: | 268 |
Alignm identity: | 186 |
Alignm E-value: | 3e-30 |
Alignm gaps (pig, cow): | 131, 85 |
Conread position: | 540-691 |
Cow position: | chr21:26182892-26182740 (view UCSC Genome Browser custom track) |
Alignm length: | 154 |
Alignm identity: | 114 |
Alignm E-value: | 5e-23 |
Alignm gaps (pig, cow): | 33, 74 |
Conread position: | 560-802 |
Cow position: | chr21:15913426-15913664 (view UCSC Genome Browser custom track) |
Alignm length: | 245 |
Alignm identity: | 176 |
Alignm E-value: | 5e-34 |
Alignm gaps (pig, cow): | 95, 25 |
Conread position: | 576-781 |
Cow position: | chr21:41189153-41189361 (view UCSC Genome Browser custom track) |
Alignm length: | 210 |
Alignm identity: | 143 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 79, 37 |
Conread position: | 585-792 |
Cow position: | chr21:28202306-28202510 (view UCSC Genome Browser custom track) |
Alignm length: | 209 |
Alignm identity: | 142 |
Alignm E-value: | 4e-22 |
Alignm gaps (pig, cow): | 74, 10 |
Conread position: | 588-780 |
Cow position: | chr21:15319816-15319626 (view UCSC Genome Browser custom track) |
Alignm length: | 195 |
Alignm identity: | 137 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 67, 25 |
Conread position: | 604-724 |
Cow position: | chr21:40648006-40648126 (view UCSC Genome Browser custom track) |
Alignm length: | 122 |
Alignm identity: | 96 |
Alignm E-value: | 4e-22 |
Alignm gaps (pig, cow): | 56, 32 |
Conread position: | 606-781 |
Cow position: | chr21:20928080-20927904 (view UCSC Genome Browser custom track) |
Alignm length: | 177 |
Alignm identity: | 124 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 49, 0 |
Conread position: | 607-769 |
Cow position: | chr21:20315798-20315961 (view UCSC Genome Browser custom track) |
Alignm length: | 164 |
Alignm identity: | 120 |
Alignm E-value: | 6e-26 |
Alignm gaps (pig, cow): | 52, 0 |
Conread position: | 608-781 |
Cow position: | chr21:16981399-16981573 (view UCSC Genome Browser custom track) |
Alignm length: | 175 |
Alignm identity: | 131 |
Alignm E-value: | 4e-31 |
Alignm gaps (pig, cow): | 47, 0 |
Conread position: | 644-781 |
Cow position: | chr21:2138602-2138466 (view UCSC Genome Browser custom track) |
Alignm length: | 139 |
Alignm identity: | 108 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 15, 79 |
Show alignments to all cow chromosomes.