Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8048L06.5
        

               Conread position:
               439-785
               

               Cow position:
               
               

               Alignm length:
               349
               

               Alignm identity:
               226
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               25, 171
               

               Conread position:
               444-794
               

               Cow position:
               
               

               Alignm length:
               358
               

               Alignm identity:
               232
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               30, 177
               

               Conread position:
               445-760
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               206
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               206, 126
               

               Conread position:
               447-796
               

               Cow position:
               
               

               Alignm length:
               354
               

               Alignm identity:
               228
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               19, 38
               

               Conread position:
               448-721
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               187
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               19, 160
               

               Conread position:
               448-724
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               190
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               17, 31
               

               Conread position:
               448-746
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               199
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               16, 69
               

               Conread position:
               448-748
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               202
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               182, 25
               

               Conread position:
               448-751
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               201
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               16, 167
               

               Conread position:
               448-751
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               204
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               448-754
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               203
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               68, 15
               

               Conread position:
               448-755
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               221
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               56, 9
               

               Conread position:
               448-755
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               214
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               207, 30
               

               Conread position:
               448-756
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               205
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               15, 35
               

               Conread position:
               448-756
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               202
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               16, 89
               

               Conread position:
               448-759
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               201
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               16, 71
               

               Conread position:
               448-760
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               212
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               16, 162
               

               Conread position:
               448-767
               

               Cow position:
               
               

               Alignm length:
               321
               

               Alignm identity:
               209
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               206, 15
               

               Conread position:
               448-767
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               220
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               15, 79
               

               Conread position:
               448-768
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               227
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               16, 120
               

               Conread position:
               448-768
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               223
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               16, 131
               

               Conread position:
               448-769
               

               Cow position:
               
               

               Alignm length:
               335
               

               Alignm identity:
               214
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               27, 15
               

               Conread position:
               448-779
               

               Cow position:
               
               

               Alignm length:
               333
               

               Alignm identity:
               212
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               21, 72
               

               Conread position:
               448-780
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               226
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               16, 142
               

               Conread position:
               448-781
               

               Cow position:
               
               

               Alignm length:
               344
               

               Alignm identity:
               225
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               39, 15
               

               Conread position:
               448-784
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               224
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               125, 15
               

               Conread position:
               448-789
               

               Cow position:
               
               

               Alignm length:
               347
               

               Alignm identity:
               240
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               77, 33
               

               Conread position:
               448-797
               

               Cow position:
               
               

               Alignm length:
               354
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 86
               

               Conread position:
               448-803
               

               Cow position:
               
               

               Alignm length:
               361
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 147
               

               Conread position:
               448-804
               

               Cow position:
               
               

               Alignm length:
               359
               

               Alignm identity:
               248
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               16, 35
               

               Conread position:
               450-755
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               198
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               19, 154
               

               Conread position:
               450-759
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               214
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               209, 13
               

               Conread position:
               450-765
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               205
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               14, 58
               

               Conread position:
               450-767
               

               Cow position:
               
               

               Alignm length:
               331
               

               Alignm identity:
               229
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               14, 172
               

               Conread position:
               450-781
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               233
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               84, 13
               

               Conread position:
               450-781
               

               Cow position:
               
               

               Alignm length:
               333
               

               Alignm identity:
               212
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               208, 19
               

               Conread position:
               451-784
               

               Cow position:
               
               

               Alignm length:
               335
               

               Alignm identity:
               219
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               13, 101
               

               Conread position:
               454-710
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               180
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               11, 153
               

               Conread position:
               454-768
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               217
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               10, 161
               

               Conread position:
               454-780
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               218
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               10, 166
               

               Conread position:
               455-720
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               190
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               14, 65
               

               Conread position:
               455-756
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               203
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               9, 65
               

               Conread position:
               455-756
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               220
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 66
               

               Conread position:
               455-785
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               217
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               14, 64
               

               Conread position:
               456-740
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               193
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               57, 10
               

               Conread position:
               456-781
               

               Cow position:
               
               

               Alignm length:
               330
               

               Alignm identity:
               222
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               8, 160
               

               Conread position:
               457-774
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               206
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               18, 153
               

               Conread position:
               458-714
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               187
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               10, 63
               

               Conread position:
               463-785
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               206
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               108, 144
               

               Conread position:
               464-756
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               196
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               64, 73
               

               Conread position:
               464-778
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               216
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               116, 149
               

               Conread position:
               465-755
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               211
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               108, 150
               

               Conread position:
               467-781
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               213
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               106, 74
               

               Conread position:
               467-797
               

               Cow position:
               
               

               Alignm length:
               334
               

               Alignm identity:
               221
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               267, 65
               

               Conread position:
               468-740
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               187
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               61, 51
               

               Conread position:
               468-754
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               194
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               61, 48
               

               Conread position:
               473-752
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               185
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               165, 103
               

               Conread position:
               473-781
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               203
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               100, 9
               

               Conread position:
               474-794
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               215
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               106, 130
               

               Conread position:
               475-756
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               204
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               53, 44
               

               Conread position:
               475-778
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               211
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               85, 95
               

               Conread position:
               477-790
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               204
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               55, 42
               

               Conread position:
               479-752
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               183
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               152, 40
               

               Conread position:
               479-780
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               194
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               94, 32
               

               Conread position:
               486-722
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               20, 41
               

               Conread position:
               487-665
               

               Cow position:
               
               

               Alignm length:
               180
               

               Alignm identity:
               127
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               81, 122
               

               Conread position:
               489-722
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               156
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               37, 131
               

               Conread position:
               489-755
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               191
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               79, 97
               

               Conread position:
               489-756
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               181
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               172, 59
               

               Conread position:
               489-781
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               192
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               43, 31
               

               Conread position:
               489-781
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               200
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               84, 30
               

               Conread position:
               491-768
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               179
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               36, 126
               

               Conread position:
               491-780
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               206
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               167, 79
               

               Conread position:
               494-756
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               173
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               19, 52
               

               Conread position:
               494-793
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               206
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               65, 108
               

               Conread position:
               497-755
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               179
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               497-785
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               190
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               30, 22
               

               Conread position:
               499-760
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               175
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               160, 71
               

               Conread position:
               502-781
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               193
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               25, 17
               

               Conread position:
               502-794
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               192
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               37, 69
               

               Conread position:
               505-797
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               206
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               68, 31
               

               Conread position:
               507-725
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               66, 33
               

               Conread position:
               508-761
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               183
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               53, 10
               

               Conread position:
               513-755
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               19, 59
               

               Conread position:
               513-759
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               60, 6
               

               Conread position:
               513-796
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               193
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               64, 74
               

               Conread position:
               520-756
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               7, 95
               

               Conread position:
               521-785
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               174
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               137, 92
               

               Conread position:
               527-769
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               176
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               44, 27
               

               Conread position:
               528-763
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               159
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               31, 50
               

               Conread position:
               536-781
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               174
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               40, 53
               

               Conread position:
               537-770
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               159
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               109, 40
               

               Conread position:
               553-750
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               135
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               20, 61
               

               Conread position:
               557-750
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               16, 57
               

               Conread position:
               572-779
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               146
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               87, 0
               

               Conread position:
               574-756
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               126
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               580-769
               

               Cow position:
               
               

               Alignm length:
               191
               

               Alignm identity:
               140
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               75, 33
               

               Conread position:
               585-757
               

               Cow position:
               
               

               Alignm length:
               174
               

               Alignm identity:
               121
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               72, 30
               

               Conread position:
               588-795
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               153
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               67, 19
               

               Conread position:
               590-757
               

               Cow position:
               
               

               Alignm length:
               169
               

               Alignm identity:
               121
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               68, 23
               

               Conread position:
               593-781
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               134
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               62, 20
               

               Conread position:
               596-768
               

               Cow position:
               
               

               Alignm length:
               174
               

               Alignm identity:
               125
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               59, 44
               

               Conread position:
               606-781
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               128
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               16, 30
               

               Conread position:
               608-733
               

               Cow position:
               
               

               Alignm length:
               127
               

               Alignm identity:
               97
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               608-755
               

               Cow position:
               
               

               Alignm length:
               150
               

               Alignm identity:
               110
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               615-793
               

               Cow position:
               
               

               Alignm length:
               181
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               44, 73
               
Show alignments to all cow chromosomes.