Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8048L06.5 |
| Conread position: | 444-757 |
| Cow position: | chr26:16485957-16486271 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 219 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 199 |
| Conread position: | 445-755 |
| Cow position: | chr26:35538750-35538415 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 220 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 19, 218 |
| Conread position: | 448-689 |
| Cow position: | chr26:30324474-30324227 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 167 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 16, 43 |
| Conread position: | 448-707 |
| Cow position: | chr26:17734543-17734803 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 6, 100 |
| Conread position: | 448-720 |
| Cow position: | chr26:12223839-12224109 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 193 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 16, 49 |
| Conread position: | 448-722 |
| Cow position: | chr26:20248245-20248519 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 196 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 17, 71 |
| Conread position: | 448-741 |
| Cow position: | chr26:28961820-28961529 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 207 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 17, 93 |
| Conread position: | 448-748 |
| Cow position: | chr26:8609829-8609536 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 209 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 16, 32 |
| Conread position: | 448-750 |
| Cow position: | chr26:4108256-4108544 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 205 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 15, 74 |
| Conread position: | 448-750 |
| Cow position: | chr26:7098012-7097719 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 214 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 16, 105 |
| Conread position: | 448-751 |
| Cow position: | chr26:32876007-32876309 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 221 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 34 |
| Conread position: | 448-753 |
| Cow position: | chr26:21691510-21691219 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 217 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 15, 123 |
| Conread position: | 448-755 |
| Cow position: | chr26:17586979-17586667 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 214 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 21, 172 |
| Conread position: | 448-756 |
| Cow position: | chr26:9494135-9493827 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 166 |
| Conread position: | 448-767 |
| Cow position: | chr26:8507007-8506697 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 218 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 17, 104 |
| Conread position: | 448-769 |
| Cow position: | chr26:7522062-7521744 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 225 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 16, 72 |
| Conread position: | 448-779 |
| Cow position: | chr26:23930809-23930476 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 227 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 16, 167 |
| Conread position: | 448-784 |
| Cow position: | chr26:5695212-5694874 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 227 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 16, 173 |
| Conread position: | 448-802 |
| Cow position: | chr26:6736493-6736846 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 168 |
| Conread position: | 450-719 |
| Cow position: | chr26:29937022-29937291 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 185 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 15, 148 |
| Conread position: | 450-741 |
| Cow position: | chr26:19639951-19640240 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 207 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 15, 143 |
| Conread position: | 450-750 |
| Cow position: | chr26:30482646-30482938 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 199 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 119, 13 |
| Conread position: | 450-777 |
| Cow position: | chr26:16974816-16975137 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 227 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 79, 69 |
| Conread position: | 450-780 |
| Cow position: | chr26:35147809-35147482 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 233 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 15, 41 |
| Conread position: | 451-769 |
| Cow position: | chr26:4216098-4215779 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 198 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 12, 154 |
| Conread position: | 451-778 |
| Cow position: | chr26:18580823-18580495 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 213 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 13, 49 |
| Conread position: | 454-753 |
| Cow position: | chr26:6689669-6689383 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 198 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 203, 77 |
| Conread position: | 454-760 |
| Cow position: | chr26:15408695-15408998 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 198 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 146, 15 |
| Conread position: | 454-796 |
| Cow position: | chr26:8265141-8265482 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 234 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 10, 98 |
| Conread position: | 455-649 |
| Cow position: | chr26:19872442-19872253 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 8, 37 |
| Conread position: | 455-755 |
| Cow position: | chr26:28997328-28997023 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 210 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 34, 8 |
| Conread position: | 455-759 |
| Cow position: | chr26:19717648-19717348 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 212 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 8, 154 |
| Conread position: | 455-760 |
| Cow position: | chr26:24027062-24027361 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 212 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 9, 63 |
| Conread position: | 455-801 |
| Cow position: | chr26:19879990-19880344 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 227 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 9, 171 |
| Conread position: | 457-753 |
| Cow position: | chr26:21609822-21609524 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 201 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 13, 107 |
| Conread position: | 463-781 |
| Cow position: | chr26:22221145-22221452 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 208 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 189, 56 |
| Conread position: | 464-768 |
| Cow position: | chr26:15902027-15902325 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 199 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 95, 43 |
| Conread position: | 464-769 |
| Cow position: | chr26:25333758-25334061 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 209 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 46, 75 |
| Conread position: | 468-760 |
| Cow position: | chr26:13739270-13738977 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 201 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 25, 51 |
| Conread position: | 475-755 |
| Cow position: | chr26:5198867-5199137 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 194 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 90, 138 |
| Conread position: | 476-756 |
| Cow position: | chr26:13344088-13343804 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 184 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 42, 141 |
| Conread position: | 477-726 |
| Cow position: | chr26:15881958-15882206 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 169 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 77, 71 |
| Conread position: | 479-790 |
| Cow position: | chr26:11959993-11959687 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 216 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 94, 47 |
| Conread position: | 486-774 |
| Cow position: | chr26:10599462-10599179 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 194 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 39, 32 |
| Conread position: | 488-769 |
| Cow position: | chr26:13163333-13163058 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 185 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 62, 86 |
| Conread position: | 489-728 |
| Cow position: | chr26:32617222-32616982 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 165 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 39, 30 |
| Conread position: | 489-774 |
| Cow position: | chr26:11962992-11963278 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 191 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 87, 127 |
| Conread position: | 489-781 |
| Cow position: | chr26:10332104-10332395 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 197 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 79, 120 |
| Conread position: | 491-715 |
| Cow position: | chr26:16818873-16818657 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 160 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 34, 27 |
| Conread position: | 491-769 |
| Cow position: | chr26:30981946-30981665 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 183 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 41, 29 |
| Conread position: | 494-728 |
| Cow position: | chr26:28662562-28662330 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 165 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 79, 121 |
| Conread position: | 494-784 |
| Cow position: | chr26:14438389-14438106 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 203 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 79, 117 |
| Conread position: | 501-750 |
| Cow position: | chr26:16151554-16151790 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 170 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 54, 67 |
| Conread position: | 502-804 |
| Cow position: | chr26:27849522-27849216 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 206 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 113, 42 |
| Conread position: | 504-756 |
| Cow position: | chr26:26313940-26314180 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 169 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 69, 43 |
| Conread position: | 507-774 |
| Cow position: | chr26:17314103-17313824 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 193 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 509-756 |
| Cow position: | chr26:15624363-15624115 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 180 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 64, 108 |
| Conread position: | 520-769 |
| Cow position: | chr26:8548244-8548001 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 180 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 134, 31 |
| Conread position: | 520-792 |
| Cow position: | chr26:16724196-16723923 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 192 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 23, 146 |
| Conread position: | 522-760 |
| Cow position: | chr26:16784823-16785061 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 162 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 135, 91 |
| Conread position: | 548-747 |
| Cow position: | chr26:22320122-22319919 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 25, 72 |
| Conread position: | 550-786 |
| Cow position: | chr26:12032902-12032666 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 27, 66 |
| Conread position: | 553-767 |
| Cow position: | chr26:22351886-22351675 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 20, 61 |
| Conread position: | 553-792 |
| Cow position: | chr26:1351367-1351139 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 163 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 20, 61 |
| Conread position: | 554-774 |
| Cow position: | chr26:7307938-7308154 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 19, 60 |
| Conread position: | 554-794 |
| Cow position: | chr26:23212596-23212830 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 173 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 19, 43 |
| Conread position: | 561-755 |
| Cow position: | chr26:12621383-12621189 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 12, 53 |
| Conread position: | 578-781 |
| Cow position: | chr26:10124039-10123839 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 144 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 80, 27 |
| Conread position: | 585-733 |
| Cow position: | chr26:26019234-26019382 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 114 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 74, 32 |
| Conread position: | 585-794 |
| Cow position: | chr26:19859256-19859464 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 74, 28 |
| Conread position: | 588-756 |
| Cow position: | chr26:21638826-21638660 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 67, 30 |
| Conread position: | 588-785 |
| Cow position: | chr26:5191089-5190896 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 67, 26 |
| Conread position: | 590-719 |
| Cow position: | chr26:31722987-31722858 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 100 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 65, 23 |
| Conread position: | 591-781 |
| Cow position: | chr26:26980698-26980888 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 132 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 65, 22 |
| Conread position: | 595-781 |
| Cow position: | chr26:24376513-24376332 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 132 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 62, 18 |
| Conread position: | 596-754 |
| Cow position: | chr26:25700956-25700798 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 119 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 63, 17 |
| Conread position: | 607-757 |
| Cow position: | chr26:16612312-16612463 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 112 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 608-781 |
| Cow position: | chr26:18375517-18375688 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 126 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 23, 62 |
| Conread position: | 610-799 |
| Cow position: | chr26:19328169-19328359 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 18, 167 |
| Conread position: | 625-797 |
| Cow position: | chr26:25086192-25086017 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 21, 165 |
| Conread position: | 644-774 |
| Cow position: | chr26:12541862-12541731 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 99 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 644-781 |
| Cow position: | chr26:26628111-26627973 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 102 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 11, 0 |
Show alignments to all cow chromosomes.