Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8048L06.5
        

               Conread position:
               444-786
               

               Cow position:
               
               

               Alignm length:
               348
               

               Alignm identity:
               234
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               21, 53
               

               Conread position:
               445-756
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               207
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               445-797
               

               Cow position:
               
               

               Alignm length:
               356
               

               Alignm identity:
               239
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               18, 74
               

               Conread position:
               448-681
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               125, 15
               

               Conread position:
               448-724
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               186
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               17, 63
               

               Conread position:
               448-745
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               196
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               75, 15
               

               Conread position:
               448-756
               

               Cow position:
               
               

               Alignm length:
               313
               

               Alignm identity:
               212
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               16, 151
               

               Conread position:
               448-756
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               222
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 9
               

               Conread position:
               448-756
               

               Cow position:
               
               

               Alignm length:
               313
               

               Alignm identity:
               220
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               16, 50
               

               Conread position:
               448-759
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               212
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               16, 150
               

               Conread position:
               448-760
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               213
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               17, 48
               

               Conread position:
               448-767
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               225
               

               Alignm E-value:
               7.00005e-41
               

               Alignm gaps (pig, cow):
               15, 63
               

               Conread position:
               448-767
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               222
               

               Alignm E-value:
               8.00001e-42
               

               Alignm gaps (pig, cow):
               17, 126
               

               Conread position:
               448-768
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               219
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               16, 120
               

               Conread position:
               448-769
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               228
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               16, 37
               

               Conread position:
               448-769
               

               Cow position:
               
               

               Alignm length:
               332
               

               Alignm identity:
               219
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               16, 175
               

               Conread position:
               448-769
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               216
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               17, 93
               

               Conread position:
               448-781
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               228
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               16, 150
               

               Conread position:
               448-786
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               235
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 115
               

               Conread position:
               448-794
               

               Cow position:
               
               

               Alignm length:
               354
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 31
               

               Conread position:
               448-794
               

               Cow position:
               
               

               Alignm length:
               354
               

               Alignm identity:
               241
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               79, 15
               

               Conread position:
               449-794
               

               Cow position:
               
               

               Alignm length:
               350
               

               Alignm identity:
               231
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               148, 14
               

               Conread position:
               450-681
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               161
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               454-750
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               194
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               15, 66
               

               Conread position:
               455-710
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               180
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               10, 161
               

               Conread position:
               456-756
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               201
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               7, 51
               

               Conread position:
               456-781
               

               Cow position:
               
               

               Alignm length:
               330
               

               Alignm identity:
               222
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               7, 65
               

               Conread position:
               457-769
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               208
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               7, 40
               

               Conread position:
               457-774
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               216
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               116, 156
               

               Conread position:
               460-712
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               175
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               113, 135
               

               Conread position:
               463-755
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               179
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               114, 88
               

               Conread position:
               470-785
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               205
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               103, 58
               

               Conread position:
               471-759
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               184
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               103, 0
               

               Conread position:
               474-767
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               197
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               56, 45
               

               Conread position:
               475-721
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               101, 25
               

               Conread position:
               479-756
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               185
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               90, 115
               

               Conread position:
               479-781
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               202
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               94, 144
               

               Conread position:
               480-760
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               194
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               47, 39
               

               Conread position:
               480-769
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               202
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               88, 48
               

               Conread position:
               481-756
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               197
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               92, 13
               

               Conread position:
               484-753
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               176
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               92, 72
               

               Conread position:
               488-750
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               176
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               83, 25
               

               Conread position:
               488-802
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               217
               

               Alignm E-value:
               8.00001e-42
               

               Alignm gaps (pig, cow):
               85, 73
               

               Conread position:
               489-795
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               218
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               87, 125
               

               Conread position:
               490-721
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               159
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               168, 76
               

               Conread position:
               490-760
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               181
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               86, 46
               

               Conread position:
               490-781
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               193
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               81, 259
               

               Conread position:
               490-785
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               192
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               83, 124
               

               Conread position:
               494-780
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               199
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               60, 49
               

               Conread position:
               497-767
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               186
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               44, 31
               

               Conread position:
               500-748
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               167
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               47, 55
               

               Conread position:
               500-804
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               196
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               73, 34
               

               Conread position:
               502-800
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               194
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               23, 16
               

               Conread position:
               508-792
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               192
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               19, 11
               

               Conread position:
               509-707
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               139
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               64, 105
               

               Conread position:
               511-715
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               140
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               62, 96
               

               Conread position:
               522-774
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               167
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               58, 24
               

               Conread position:
               523-769
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               172
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               50, 81
               

               Conread position:
               529-756
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               160
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               84, 45
               

               Conread position:
               536-796
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               175
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               37, 224
               

               Conread position:
               540-781
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               160
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               33, 20
               

               Conread position:
               552-778
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               21, 63
               

               Conread position:
               553-769
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               18, 88
               

               Conread position:
               553-796
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               18, 54
               

               Conread position:
               554-791
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               164
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               19, 40
               

               Conread position:
               573-781
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               86, 40
               

               Conread position:
               574-753
               

               Cow position:
               
               

               Alignm length:
               180
               

               Alignm identity:
               126
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               584-769
               

               Cow position:
               
               

               Alignm length:
               190
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               17, 34
               

               Conread position:
               585-755
               

               Cow position:
               
               

               Alignm length:
               173
               

               Alignm identity:
               122
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               53, 142
               

               Conread position:
               588-781
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               144
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               588-804
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               148
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               67, 13
               

               Conread position:
               590-756
               

               Cow position:
               
               

               Alignm length:
               169
               

               Alignm identity:
               125
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               58, 106
               

               Conread position:
               601-796
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               134
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               58, 12
               

               Conread position:
               604-774
               

               Cow position:
               
               

               Alignm length:
               171
               

               Alignm identity:
               121
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               607-773
               

               Cow position:
               
               

               Alignm length:
               168
               

               Alignm identity:
               119
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               53, 155
               

               Conread position:
               608-748
               

               Cow position:
               
               

               Alignm length:
               142
               

               Alignm identity:
               107
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               47, 34
               

               Conread position:
               609-785
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               125
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               625-802
               

               Cow position:
               
               

               Alignm length:
               179
               

               Alignm identity:
               123
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               30, 159
               
Show alignments to all cow chromosomes.