Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8048L06.5
        

               Conread position:
               1-804
               

               Cow position:
               
               

               Alignm length:
               833
               

               Alignm identity:
               642
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 18
               

               Conread position:
               434-760
               

               Cow position:
               
               

               Alignm length:
               335
               

               Alignm identity:
               223
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               82, 15
               

               Conread position:
               445-770
               

               Cow position:
               
               

               Alignm length:
               334
               

               Alignm identity:
               224
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               18, 47
               

               Conread position:
               448-681
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               169
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               17, 70
               

               Conread position:
               448-723
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               181
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               16, 116
               

               Conread position:
               448-724
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               182
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               206, 15
               

               Conread position:
               448-742
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               195
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               15, 113
               

               Conread position:
               448-753
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               215
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               17, 122
               

               Conread position:
               448-754
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               209
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               19, 31
               

               Conread position:
               448-756
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               218
               

               Alignm E-value:
               6.02558e-44
               

               Alignm gaps (pig, cow):
               78, 163
               

               Conread position:
               448-769
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               227
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               15, 22
               

               Conread position:
               448-769
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               227
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               14, 68
               

               Conread position:
               448-774
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               226
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               17, 7
               

               Conread position:
               448-780
               

               Cow position:
               
               

               Alignm length:
               335
               

               Alignm identity:
               214
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               17, 160
               

               Conread position:
               448-792
               

               Cow position:
               
               

               Alignm length:
               350
               

               Alignm identity:
               239
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               125, 15
               

               Conread position:
               448-796
               

               Cow position:
               
               

               Alignm length:
               358
               

               Alignm identity:
               235
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               16, 35
               

               Conread position:
               449-726
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               186
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               15, 29
               

               Conread position:
               449-780
               

               Cow position:
               
               

               Alignm length:
               335
               

               Alignm identity:
               232
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               15, 33
               

               Conread position:
               450-753
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               217
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               5, 14
               

               Conread position:
               450-756
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               203
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               15, 165
               

               Conread position:
               450-760
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               208
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               14, 83
               

               Conread position:
               450-774
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               224
               

               Alignm E-value:
               9e-37
               

               Alignm gaps (pig, cow):
               15, 22
               

               Conread position:
               452-769
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               205
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               27, 84
               

               Conread position:
               454-740
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               200
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               122, 9
               

               Conread position:
               454-753
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               208
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               25, 16
               

               Conread position:
               454-760
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               213
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               203, 9
               

               Conread position:
               454-760
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               204
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               13, 118
               

               Conread position:
               455-750
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               197
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               23, 117
               

               Conread position:
               455-755
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               198
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               19, 8
               

               Conread position:
               455-756
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               205
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               9, 65
               

               Conread position:
               455-760
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               198
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               10, 116
               

               Conread position:
               455-774
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               205
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               9, 154
               

               Conread position:
               456-755
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               207
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               90, 152
               

               Conread position:
               457-771
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               206
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               70, 42
               

               Conread position:
               458-747
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               192
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               196, 10
               

               Conread position:
               463-762
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               205
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               195, 104
               

               Conread position:
               463-787
               

               Cow position:
               
               

               Alignm length:
               329
               

               Alignm identity:
               210
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               69, 18
               

               Conread position:
               465-742
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               182
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               59, 69
               

               Conread position:
               466-729
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               178
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               107, 35
               

               Conread position:
               466-757
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               198
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               190, 37
               

               Conread position:
               467-781
               

               Cow position:
               
               

               Alignm length:
               321
               

               Alignm identity:
               206
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               109, 64
               

               Conread position:
               468-755
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               188
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               105, 74
               

               Conread position:
               471-781
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               210
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               56, 48
               

               Conread position:
               473-761
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               194
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               135, 37
               

               Conread position:
               473-769
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               206
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               82, 138
               

               Conread position:
               477-780
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               206
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               96, 138
               

               Conread position:
               477-781
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               202
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               182, 36
               

               Conread position:
               479-724
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               171
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               49, 8
               

               Conread position:
               485-674
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               137
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               91, 34
               

               Conread position:
               486-756
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               184
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               11, 17
               

               Conread position:
               486-756
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               183
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               87, 48
               

               Conread position:
               486-777
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               200
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               168, 65
               

               Conread position:
               489-750
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               170
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               84, 125
               

               Conread position:
               489-752
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               178
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               39, 120
               

               Conread position:
               489-756
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               39, 30
               

               Conread position:
               489-779
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               192
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               154, 86
               

               Conread position:
               489-785
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               199
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               17, 127
               

               Conread position:
               489-788
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               195
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               82, 125
               

               Conread position:
               491-747
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               89, 126
               

               Conread position:
               491-753
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               175
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               82, 125
               

               Conread position:
               494-721
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               79, 100
               

               Conread position:
               497-769
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               186
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               76, 119
               

               Conread position:
               498-781
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               186
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               136, 81
               

               Conread position:
               498-782
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               205
               

               Alignm E-value:
               9e-37
               

               Alignm gaps (pig, cow):
               75, 28
               

               Conread position:
               501-767
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               182
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               72, 50
               

               Conread position:
               502-757
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               172
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               19, 49
               

               Conread position:
               507-736
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               160
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               153, 60
               

               Conread position:
               513-755
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               170
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               60, 101
               

               Conread position:
               513-760
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               184
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               519-788
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               187
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               54, 32
               

               Conread position:
               526-797
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               180
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               129, 41
               

               Conread position:
               536-709
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               128
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               35, 78
               

               Conread position:
               536-769
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               167
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               119, 47
               

               Conread position:
               540-756
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               38, 74
               

               Conread position:
               541-803
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               176
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               30, 73
               

               Conread position:
               574-784
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               150
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               81, 39
               

               Conread position:
               575-797
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               161
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               85, 38
               

               Conread position:
               585-756
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               133
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               585-780
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               74, 28
               

               Conread position:
               588-760
               

               Cow position:
               
               

               Alignm length:
               174
               

               Alignm identity:
               126
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               67, 27
               

               Conread position:
               588-774
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               132
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               67, 25
               

               Conread position:
               588-780
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               137
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               70, 25
               

               Conread position:
               592-760
               

               Cow position:
               
               

               Alignm length:
               170
               

               Alignm identity:
               121
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               65, 21
               

               Conread position:
               593-774
               

               Cow position:
               
               

               Alignm length:
               183
               

               Alignm identity:
               134
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               62, 20
               

               Conread position:
               603-790
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               135
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               608-766
               

               Cow position:
               
               

               Alignm length:
               161
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               50, 116
               

               Conread position:
               608-781
               

               Cow position:
               
               

               Alignm length:
               174
               

               Alignm identity:
               120
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               123, 0
               

               Conread position:
               622-769
               

               Cow position:
               
               

               Alignm length:
               149
               

               Alignm identity:
               108
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               33, 0
               
Show alignments to all cow chromosomes.