Cow genome map

Conread name: Ss1.1-Pig4-TMW8049J12.3

Conread position: 377-732
Cow position: chr10:65710881-65710518 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 245
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 7, 184

Conread position: 377-835
Cow position: chr10:804577-804127 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 174

Conread position: 379-634
Cow position: chr10:58240818-58240556 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 185
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 86, 56

Conread position: 379-833
Cow position: chr10:62846823-62846349 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 172

Conread position: 380-569
Cow position: chr10:23368356-23368168 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 140
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 83, 158

Conread position: 380-630
Cow position: chr10:13787505-13787742 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 183
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 162, 57

Conread position: 380-633
Cow position: chr10:37102435-37102684 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 175
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 80, 162

Conread position: 380-833
Cow position: chr10:68514718-68514266 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 15

Conread position: 380-836
Cow position: chr10:62625698-62626162 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 170

Conread position: 380-862
Cow position: chr10:18322270-18321813 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 193, 72

Conread position: 380-862
Cow position: chr10:53745375-53745853 (view UCSC Genome Browser custom track)
Alignm length: 506
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 51

Conread position: 381-862
Cow position: chr10:1204717-1204252 (view UCSC Genome Browser custom track)
Alignm length: 490
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 112

Conread position: 383-527
Cow position: chr10:39410593-39410445 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 113
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 70, 0

Conread position: 383-534
Cow position: chr10:9465371-9465218 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 119
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 77, 106

Conread position: 383-634
Cow position: chr10:28559960-28560212 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 178
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 77, 220

Conread position: 383-634
Cow position: chr10:45348892-45348647 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 189
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 80, 109

Conread position: 383-634
Cow position: chr10:46742163-46741914 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 182
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 86, 33

Conread position: 383-634
Cow position: chr10:55843945-55844197 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 182
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 54, 163

Conread position: 383-763
Cow position: chr10:5110757-5110371 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 81

Conread position: 383-807
Cow position: chr10:47342583-47342155 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 72

Conread position: 383-808
Cow position: chr10:37982922-37983350 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 291
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 75, 30

Conread position: 383-832
Cow position: chr10:30400715-30400281 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 315
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 77, 96

Conread position: 383-836
Cow position: chr10:17229577-17230027 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 162

Conread position: 383-840
Cow position: chr10:41768519-41768068 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 318
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 75, 146

Conread position: 383-861
Cow position: chr10:39066143-39065671 (view UCSC Genome Browser custom track)
Alignm length: 497
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 102

Conread position: 384-535
Cow position: chr10:4933319-4933165 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 116
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 79, 0

Conread position: 384-630
Cow position: chr10:11445427-11445177 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 170
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 78, 43

Conread position: 384-632
Cow position: chr10:27262784-27263037 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 186
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 5, 171

Conread position: 384-762
Cow position: chr10:19180732-19180356 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 29

Conread position: 384-831
Cow position: chr10:59481990-59482442 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 315
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 79, 112

Conread position: 384-836
Cow position: chr10:36927435-36926996 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 321
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 22, 112

Conread position: 385-808
Cow position: chr10:17963324-17962905 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 157

Conread position: 385-808
Cow position: chr10:39483104-39482675 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 160

Conread position: 388-808
Cow position: chr10:32617831-32617406 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 156

Conread position: 389-634
Cow position: chr10:57754430-57754192 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 177
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 74, 48

Conread position: 390-752
Cow position: chr10:26812499-26812136 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 55

Conread position: 403-550
Cow position: chr10:31610769-31610916 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 110
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 410-836
Cow position: chr10:69619770-69619343 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 291
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 157, 47

Conread position: 413-632
Cow position: chr10:28251954-28252170 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 160
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 45, 98

Conread position: 414-634
Cow position: chr10:39511626-39511411 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 160
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 50, 92

Conread position: 415-833
Cow position: chr10:67843839-67843417 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 92

Conread position: 424-835
Cow position: chr10:2272461-2272860 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 287
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 36, 23

Conread position: 447-840
Cow position: chr10:6339034-6338643 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 65

Conread position: 448-853
Cow position: chr10:28513790-28514172 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 275
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 10, 42

Conread position: 459-634
Cow position: chr10:9087595-9087423 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 132
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 107, 11

Conread position: 464-833
Cow position: chr10:31630636-31631004 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 26

Conread position: 470-634
Cow position: chr10:8079293-8079458 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 127
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 90, 0

Conread position: 471-764
Cow position: chr10:52234303-52234010 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 223
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 35, 22

Conread position: 498-808
Cow position: chr10:45877384-45877709 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 9

Conread position: 539-862
Cow position: chr10:695855-695528 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 14

Conread position: 560-832
Cow position: chr10:46874223-46873956 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 194
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 16, 63

Conread position: 572-833
Cow position: chr10:54256872-54257131 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 5

Conread position: 580-848
Cow position: chr10:2234666-2234939 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 194
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 87, 52

Conread position: 630-833
Cow position: chr10:10309965-10310178 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 162
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 35, 0

Conread position: 631-833
Cow position: chr10:14175848-14175639 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 148
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 40, 150

Conread position: 631-834
Cow position: chr10:39605517-39605722 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 150
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 37, 105

Conread position: 631-862
Cow position: chr10:51725421-51725183 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 173
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 34, 217

Conread position: 634-831
Cow position: chr10:52744830-52744629 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 139
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 38, 197

Conread position: 634-848
Cow position: chr10:49868746-49868526 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 158
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 12, 189

Conread position: 634-863
Cow position: chr10:28256970-28257203 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 174
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 39, 122

Conread position: 634-863
Cow position: chr10:46739282-46739041 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 182
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 31, 220

Conread position: 637-833
Cow position: chr10:17411374-17411571 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 141
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 35, 106

Conread position: 639-825
Cow position: chr10:35291814-35291619 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 149
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 29, 0

Conread position: 641-833
Cow position: chr10:36440108-36439914 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 148
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 27, 172

Conread position: 641-862
Cow position: chr10:32972653-32972879 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 168
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 27, 205

Conread position: 644-812
Cow position: chr10:43667234-43667405 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 131
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 73, 14

Conread position: 644-834
Cow position: chr10:63485656-63485465 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 139
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 74, 118

Conread position: 644-860
Cow position: chr10:19210788-19210582 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 155
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 131, 22

Conread position: 645-864
Cow position: chr10:57751782-57751557 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 163
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 23, 202

Conread position: 650-860
Cow position: chr10:31514033-31514235 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 156
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 26, 79

Conread position: 663-834
Cow position: chr10:65759985-65759812 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 125
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 64, 96

Conread position: 674-833
Cow position: chr10:25218364-25218525 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 119
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 44, 0

Conread position: 678-862
Cow position: chr10:13787759-13787940 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 135
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 40, 16

Conread position: 685-833
Cow position: chr10:9087413-9087260 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 116
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 87, 0

Conread position: 685-833
Cow position: chr10:61443871-61444022 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 115
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 87, 0

Conread position: 685-836
Cow position: chr10:52050856-52051007 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 112
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 87, 133

Conread position: 686-862
Cow position: chr10:34704495-34704320 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 132
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 42, 153

Conread position: 690-864
Cow position: chr10:1036326-1036150 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 132
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 8, 151

Show alignments to all cow chromosomes.