Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8049J12.3
        

               Conread position:
               377-732
               

               Cow position:
               
               

               Alignm length:
               373
               

               Alignm identity:
               245
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               7, 184
               

               Conread position:
               377-835
               

               Cow position:
               
               

               Alignm length:
               469
               

               Alignm identity:
               324
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 174
               

               Conread position:
               379-634
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               185
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               86, 56
               

               Conread position:
               379-833
               

               Cow position:
               
               

               Alignm length:
               481
               

               Alignm identity:
               348
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 172
               

               Conread position:
               380-569
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               140
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               83, 158
               

               Conread position:
               380-630
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               183
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               162, 57
               

               Conread position:
               380-633
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               175
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               80, 162
               

               Conread position:
               380-833
               

               Cow position:
               
               

               Alignm length:
               462
               

               Alignm identity:
               306
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 15
               

               Conread position:
               380-836
               

               Cow position:
               
               

               Alignm length:
               469
               

               Alignm identity:
               331
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 170
               

               Conread position:
               380-862
               

               Cow position:
               
               

               Alignm length:
               488
               

               Alignm identity:
               350
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               193, 72
               

               Conread position:
               380-862
               

               Cow position:
               
               

               Alignm length:
               506
               

               Alignm identity:
               356
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               80, 51
               

               Conread position:
               381-862
               

               Cow position:
               
               

               Alignm length:
               490
               

               Alignm identity:
               347
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 112
               

               Conread position:
               383-527
               

               Cow position:
               
               

               Alignm length:
               149
               

               Alignm identity:
               113
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               383-534
               

               Cow position:
               
               

               Alignm length:
               155
               

               Alignm identity:
               119
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               77, 106
               

               Conread position:
               383-634
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               178
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               77, 220
               

               Conread position:
               383-634
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               189
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               80, 109
               

               Conread position:
               383-634
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               182
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               86, 33
               

               Conread position:
               383-634
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               182
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               54, 163
               

               Conread position:
               383-763
               

               Cow position:
               
               

               Alignm length:
               392
               

               Alignm identity:
               291
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               145, 81
               

               Conread position:
               383-807
               

               Cow position:
               
               

               Alignm length:
               437
               

               Alignm identity:
               303
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               77, 72
               

               Conread position:
               383-808
               

               Cow position:
               
               

               Alignm length:
               440
               

               Alignm identity:
               291
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               75, 30
               

               Conread position:
               383-832
               

               Cow position:
               
               

               Alignm length:
               461
               

               Alignm identity:
               315
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               77, 96
               

               Conread position:
               383-836
               

               Cow position:
               
               

               Alignm length:
               465
               

               Alignm identity:
               324
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 162
               

               Conread position:
               383-840
               

               Cow position:
               
               

               Alignm length:
               472
               

               Alignm identity:
               318
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               75, 146
               

               Conread position:
               383-861
               

               Cow position:
               
               

               Alignm length:
               497
               

               Alignm identity:
               342
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 102
               

               Conread position:
               384-535
               

               Cow position:
               
               

               Alignm length:
               155
               

               Alignm identity:
               116
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               79, 0
               

               Conread position:
               384-630
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               170
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               78, 43
               

               Conread position:
               384-632
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               186
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               5, 171
               

               Conread position:
               384-762
               

               Cow position:
               
               

               Alignm length:
               389
               

               Alignm identity:
               280
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               142, 29
               

               Conread position:
               384-831
               

               Cow position:
               
               

               Alignm length:
               472
               

               Alignm identity:
               315
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               79, 112
               

               Conread position:
               384-836
               

               Cow position:
               
               

               Alignm length:
               468
               

               Alignm identity:
               321
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               22, 112
               

               Conread position:
               385-808
               

               Cow position:
               
               

               Alignm length:
               433
               

               Alignm identity:
               295
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               75, 157
               

               Conread position:
               385-808
               

               Cow position:
               
               

               Alignm length:
               435
               

               Alignm identity:
               306
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               75, 160
               

               Conread position:
               388-808
               

               Cow position:
               
               

               Alignm length:
               434
               

               Alignm identity:
               323
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 156
               

               Conread position:
               389-634
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               177
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               74, 48
               

               Conread position:
               390-752
               

               Cow position:
               
               

               Alignm length:
               372
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 55
               

               Conread position:
               403-550
               

               Cow position:
               
               

               Alignm length:
               148
               

               Alignm identity:
               110
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               410-836
               

               Cow position:
               
               

               Alignm length:
               443
               

               Alignm identity:
               291
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               157, 47
               

               Conread position:
               413-632
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               160
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               45, 98
               

               Conread position:
               414-634
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               160
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               50, 92
               

               Conread position:
               415-833
               

               Cow position:
               
               

               Alignm length:
               436
               

               Alignm identity:
               305
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 92
               

               Conread position:
               424-835
               

               Cow position:
               
               

               Alignm length:
               424
               

               Alignm identity:
               287
               

               Alignm E-value:
               9e-36
               

               Alignm gaps (pig, cow):
               36, 23
               

               Conread position:
               447-840
               

               Cow position:
               
               

               Alignm length:
               404
               

               Alignm identity:
               286
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 65
               

               Conread position:
               448-853
               

               Cow position:
               
               

               Alignm length:
               414
               

               Alignm identity:
               275
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               10, 42
               

               Conread position:
               459-634
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               132
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               107, 11
               

               Conread position:
               464-833
               

               Cow position:
               
               

               Alignm length:
               380
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               84, 26
               

               Conread position:
               470-634
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               127
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               471-764
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               223
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               35, 22
               

               Conread position:
               498-808
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               235
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 9
               

               Conread position:
               539-862
               

               Cow position:
               
               

               Alignm length:
               334
               

               Alignm identity:
               240
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 14
               

               Conread position:
               560-832
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               194
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               16, 63
               

               Conread position:
               572-833
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               208
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               76, 5
               

               Conread position:
               580-848
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               194
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               87, 52
               

               Conread position:
               630-833
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               162
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               631-833
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               148
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               40, 150
               

               Conread position:
               631-834
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               150
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               37, 105
               

               Conread position:
               631-862
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               173
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               34, 217
               

               Conread position:
               634-831
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               38, 197
               

               Conread position:
               634-848
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               158
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               12, 189
               

               Conread position:
               634-863
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               174
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               39, 122
               

               Conread position:
               634-863
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               182
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               31, 220
               

               Conread position:
               637-833
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               35, 106
               

               Conread position:
               639-825
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               641-833
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               27, 172
               

               Conread position:
               641-862
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               168
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               27, 205
               

               Conread position:
               644-812
               

               Cow position:
               
               

               Alignm length:
               174
               

               Alignm identity:
               131
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               73, 14
               

               Conread position:
               644-834
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               139
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               74, 118
               

               Conread position:
               644-860
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               155
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               131, 22
               

               Conread position:
               645-864
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               23, 202
               

               Conread position:
               650-860
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               156
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               26, 79
               

               Conread position:
               663-834
               

               Cow position:
               
               

               Alignm length:
               175
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               64, 96
               

               Conread position:
               674-833
               

               Cow position:
               
               

               Alignm length:
               162
               

               Alignm identity:
               119
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               678-862
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               135
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               40, 16
               

               Conread position:
               685-833
               

               Cow position:
               
               

               Alignm length:
               154
               

               Alignm identity:
               116
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               87, 0
               

               Conread position:
               685-833
               

               Cow position:
               
               

               Alignm length:
               152
               

               Alignm identity:
               115
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               87, 0
               

               Conread position:
               685-836
               

               Cow position:
               
               

               Alignm length:
               153
               

               Alignm identity:
               112
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               87, 133
               

               Conread position:
               686-862
               

               Cow position:
               
               

               Alignm length:
               180
               

               Alignm identity:
               132
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               42, 153
               

               Conread position:
               690-864
               

               Cow position:
               
               

               Alignm length:
               181
               

               Alignm identity:
               132
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               8, 151
               
Show alignments to all cow chromosomes.