Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8049J12.3
        

               Conread position:
               368-634
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               196
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               35, 6
               

               Conread position:
               371-760
               

               Cow position:
               
               

               Alignm length:
               401
               

               Alignm identity:
               281
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 10
               

               Conread position:
               374-631
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               187
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               86, 107
               

               Conread position:
               376-825
               

               Cow position:
               
               

               Alignm length:
               468
               

               Alignm identity:
               323
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               39, 7
               

               Conread position:
               377-634
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               185
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               83, 114
               

               Conread position:
               377-657
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               203
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               7, 174
               

               Conread position:
               377-754
               

               Cow position:
               
               

               Alignm length:
               392
               

               Alignm identity:
               280
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 173
               

               Conread position:
               377-833
               

               Cow position:
               
               

               Alignm length:
               473
               

               Alignm identity:
               340
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               274, 101
               

               Conread position:
               378-550
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               131
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               85, 0
               

               Conread position:
               380-548
               

               Cow position:
               
               

               Alignm length:
               171
               

               Alignm identity:
               125
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               78, 156
               

               Conread position:
               380-590
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               151
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               83, 139
               

               Conread position:
               380-598
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               160
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               157, 42
               

               Conread position:
               380-617
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               170
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               83, 165
               

               Conread position:
               380-808
               

               Cow position:
               
               

               Alignm length:
               451
               

               Alignm identity:
               322
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               84, 165
               

               Conread position:
               380-834
               

               Cow position:
               
               

               Alignm length:
               464
               

               Alignm identity:
               321
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 101
               

               Conread position:
               380-838
               

               Cow position:
               
               

               Alignm length:
               470
               

               Alignm identity:
               326
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 17
               

               Conread position:
               380-842
               

               Cow position:
               
               

               Alignm length:
               479
               

               Alignm identity:
               349
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 34
               

               Conread position:
               380-848
               

               Cow position:
               
               

               Alignm length:
               476
               

               Alignm identity:
               327
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               80, 13
               

               Conread position:
               380-854
               

               Cow position:
               
               

               Alignm length:
               501
               

               Alignm identity:
               350
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               80, 33
               

               Conread position:
               381-596
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               82, 177
               

               Conread position:
               383-566
               

               Cow position:
               
               

               Alignm length:
               186
               

               Alignm identity:
               136
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               74, 104
               

               Conread position:
               383-588
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               156
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               75, 135
               

               Conread position:
               383-627
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               176
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               80, 134
               

               Conread position:
               383-632
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               176
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               168, 249
               

               Conread position:
               383-632
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               177
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               77, 201
               

               Conread position:
               383-633
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               182
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               55, 49
               

               Conread position:
               383-634
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               181
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               92, 171
               

               Conread position:
               383-634
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               179
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               77, 174
               

               Conread position:
               383-780
               

               Cow position:
               
               

               Alignm length:
               403
               

               Alignm identity:
               277
               

               Alignm E-value:
               6.99949e-42
               

               Alignm gaps (pig, cow):
               143, 134
               

               Conread position:
               383-819
               

               Cow position:
               
               

               Alignm length:
               451
               

               Alignm identity:
               309
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               82, 97
               

               Conread position:
               383-836
               

               Cow position:
               
               

               Alignm length:
               468
               

               Alignm identity:
               320
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 31
               

               Conread position:
               383-862
               

               Cow position:
               
               

               Alignm length:
               498
               

               Alignm identity:
               366
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               77, 8
               

               Conread position:
               383-862
               

               Cow position:
               
               

               Alignm length:
               486
               

               Alignm identity:
               316
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               19, 93
               

               Conread position:
               384-535
               

               Cow position:
               
               

               Alignm length:
               155
               

               Alignm identity:
               113
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               79, 0
               

               Conread position:
               384-551
               

               Cow position:
               
               

               Alignm length:
               171
               

               Alignm identity:
               129
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               79, 0
               

               Conread position:
               384-624
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               167
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               79, 53
               

               Conread position:
               384-634
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               184
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               76, 19
               

               Conread position:
               384-634
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               173
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               115, 73
               

               Conread position:
               384-703
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               214
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               384-832
               

               Cow position:
               
               

               Alignm length:
               466
               

               Alignm identity:
               326
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 246
               

               Conread position:
               386-572
               

               Cow position:
               
               

               Alignm length:
               189
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               77, 27
               

               Conread position:
               386-862
               

               Cow position:
               
               

               Alignm length:
               488
               

               Alignm identity:
               318
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               85, 163
               

               Conread position:
               387-544
               

               Cow position:
               
               

               Alignm length:
               161
               

               Alignm identity:
               116
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               76, 108
               

               Conread position:
               389-659
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               198
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               74, 129
               

               Conread position:
               391-834
               

               Cow position:
               
               

               Alignm length:
               457
               

               Alignm identity:
               323
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 111
               

               Conread position:
               393-834
               

               Cow position:
               
               

               Alignm length:
               451
               

               Alignm identity:
               307
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               70, 84
               

               Conread position:
               394-551
               

               Cow position:
               
               

               Alignm length:
               160
               

               Alignm identity:
               118
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               66, 29
               

               Conread position:
               413-642
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               163
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               40, 86
               

               Conread position:
               413-815
               

               Cow position:
               
               

               Alignm length:
               412
               

               Alignm identity:
               303
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 105
               

               Conread position:
               413-843
               

               Cow position:
               
               

               Alignm length:
               461
               

               Alignm identity:
               329
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 147
               

               Conread position:
               414-798
               

               Cow position:
               
               

               Alignm length:
               403
               

               Alignm identity:
               282
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 109
               

               Conread position:
               415-833
               

               Cow position:
               
               

               Alignm length:
               438
               

               Alignm identity:
               287
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               50, 22
               

               Conread position:
               416-862
               

               Cow position:
               
               

               Alignm length:
               473
               

               Alignm identity:
               309
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               44, 102
               

               Conread position:
               420-632
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               156
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               424-552
               

               Cow position:
               
               

               Alignm length:
               132
               

               Alignm identity:
               100
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               440-632
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               144
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               20, 41
               

               Conread position:
               442-634
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               147
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               16, 76
               

               Conread position:
               458-751
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               210
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               46, 12
               

               Conread position:
               465-845
               

               Cow position:
               
               

               Alignm length:
               400
               

               Alignm identity:
               282
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 46
               

               Conread position:
               483-862
               

               Cow position:
               
               

               Alignm length:
               391
               

               Alignm identity:
               272
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               90, 10
               

               Conread position:
               485-737
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               182
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               11, 64
               

               Conread position:
               495-634
               

               Cow position:
               
               

               Alignm length:
               141
               

               Alignm identity:
               106
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               75, 57
               

               Conread position:
               506-862
               

               Cow position:
               
               

               Alignm length:
               376
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               118, 13
               

               Conread position:
               508-831
               

               Cow position:
               
               

               Alignm length:
               329
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 34
               

               Conread position:
               548-818
               

               Cow position:
               
               

               Alignm length:
               282
               

               Alignm identity:
               199
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               32, 74
               

               Conread position:
               554-862
               

               Cow position:
               
               

               Alignm length:
               321
               

               Alignm identity:
               231
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               20, 27
               

               Conread position:
               572-831
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               195
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               89, 8
               

               Conread position:
               576-862
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               211
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               92, 57
               

               Conread position:
               578-754
               

               Cow position:
               
               

               Alignm length:
               179
               

               Alignm identity:
               130
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               138, 46
               

               Conread position:
               579-864
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               221
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               76, 276
               

               Conread position:
               581-808
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               173
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               86, 117
               

               Conread position:
               600-862
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               196
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               65, 17
               

               Conread position:
               605-781
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               131
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               63, 23
               

               Conread position:
               626-831
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               161
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               35, 172
               

               Conread position:
               631-750
               

               Cow position:
               
               

               Alignm length:
               122
               

               Alignm identity:
               95
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               631-808
               

               Cow position:
               
               

               Alignm length:
               179
               

               Alignm identity:
               131
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               141, 28
               

               Conread position:
               631-824
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               146
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               37, 186
               

               Conread position:
               631-833
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               34, 78
               

               Conread position:
               631-833
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               87, 37
               

               Conread position:
               631-833
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               157
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               631-834
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               162
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               30, 44
               

               Conread position:
               631-849
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               177
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               33, 67
               

               Conread position:
               634-808
               

               Cow position:
               
               

               Alignm length:
               187
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               634-864
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               169
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               34, 145
               

               Conread position:
               635-855
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               150
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               83, 23
               

               Conread position:
               635-860
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               80, 23
               

               Conread position:
               636-834
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               637-752
               

               Cow position:
               
               

               Alignm length:
               124
               

               Alignm identity:
               103
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               641-831
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               27, 55
               

               Conread position:
               641-836
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               151
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               26, 103
               

               Conread position:
               644-833
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               138
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               73, 14
               

               Conread position:
               644-833
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               73, 14
               

               Conread position:
               644-858
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               28, 199
               

               Conread position:
               646-841
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               145
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               67, 12
               

               Conread position:
               646-862
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               156
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               71, 12
               

               Conread position:
               656-836
               

               Cow position:
               
               

               Alignm length:
               186
               

               Alignm identity:
               130
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               671-861
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               139
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               674-836
               

               Cow position:
               
               

               Alignm length:
               165
               

               Alignm identity:
               126
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               75, 33
               

               Conread position:
               674-861
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               44, 169
               

               Conread position:
               680-836
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               121
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               682-802
               

               Cow position:
               
               

               Alignm length:
               122
               

               Alignm identity:
               94
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               91, 0
               

               Conread position:
               684-862
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               34, 155
               

               Conread position:
               686-833
               

               Cow position:
               
               

               Alignm length:
               151
               

               Alignm identity:
               118
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               41, 12
               

               Conread position:
               690-862
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               133
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               28, 39
               
Show alignments to all cow chromosomes.