Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8049J12.3
        

               Conread position:
               361-808
               

               Cow position:
               
               

               Alignm length:
               458
               

               Alignm identity:
               332
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 44
               

               Conread position:
               370-601
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               93, 20
               

               Conread position:
               374-605
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               51, 175
               

               Conread position:
               375-833
               

               Cow position:
               
               

               Alignm length:
               470
               

               Alignm identity:
               326
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 5
               

               Conread position:
               376-625
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               187
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               87, 160
               

               Conread position:
               379-567
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               81, 177
               

               Conread position:
               379-630
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               190, 20
               

               Conread position:
               380-625
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               177
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               80, 181
               

               Conread position:
               380-833
               

               Cow position:
               
               

               Alignm length:
               478
               

               Alignm identity:
               340
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 163
               

               Conread position:
               381-569
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               141
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               79, 164
               

               Conread position:
               381-615
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               169
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               79, 115
               

               Conread position:
               381-630
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               177
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               75, 204
               

               Conread position:
               381-859
               

               Cow position:
               
               

               Alignm length:
               498
               

               Alignm identity:
               341
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 149
               

               Conread position:
               383-594
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               77, 158
               

               Conread position:
               383-634
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               179
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               80, 47
               

               Conread position:
               383-808
               

               Cow position:
               
               

               Alignm length:
               438
               

               Alignm identity:
               293
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               75, 189
               

               Conread position:
               383-810
               

               Cow position:
               
               

               Alignm length:
               442
               

               Alignm identity:
               293
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               82, 21
               

               Conread position:
               383-832
               

               Cow position:
               
               

               Alignm length:
               490
               

               Alignm identity:
               336
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               89, 172
               

               Conread position:
               384-527
               

               Cow position:
               
               

               Alignm length:
               151
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               76, 144
               

               Conread position:
               384-645
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               194
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               79, 144
               

               Conread position:
               384-752
               

               Cow position:
               
               

               Alignm length:
               400
               

               Alignm identity:
               293
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 175
               

               Conread position:
               386-768
               

               Cow position:
               
               

               Alignm length:
               409
               

               Alignm identity:
               284
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               43, 160
               

               Conread position:
               386-834
               

               Cow position:
               
               

               Alignm length:
               465
               

               Alignm identity:
               331
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               183, 15
               

               Conread position:
               387-596
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               33, 26
               

               Conread position:
               387-634
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               72, 8
               

               Conread position:
               388-569
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               75, 165
               

               Conread position:
               390-567
               

               Cow position:
               
               

               Alignm length:
               181
               

               Alignm identity:
               128
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               397-827
               

               Cow position:
               
               

               Alignm length:
               444
               

               Alignm identity:
               324
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 123
               

               Conread position:
               408-837
               

               Cow position:
               
               

               Alignm length:
               437
               

               Alignm identity:
               297
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               6, 175
               

               Conread position:
               416-634
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               44, 132
               

               Conread position:
               432-634
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               31, 93
               

               Conread position:
               444-861
               

               Cow position:
               
               

               Alignm length:
               444
               

               Alignm identity:
               299
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               14, 30
               

               Conread position:
               445-836
               

               Cow position:
               
               

               Alignm length:
               413
               

               Alignm identity:
               294
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               107, 19
               

               Conread position:
               449-632
               

               Cow position:
               
               

               Alignm length:
               189
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               11, 91
               

               Conread position:
               476-835
               

               Cow position:
               
               

               Alignm length:
               366
               

               Alignm identity:
               242
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               25, 58
               

               Conread position:
               510-751
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               190
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               63, 37
               

               Conread position:
               510-836
               

               Cow position:
               
               

               Alignm length:
               344
               

               Alignm identity:
               244
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               63, 32
               

               Conread position:
               533-834
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               219
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               40, 48
               

               Conread position:
               557-834
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               200
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               19, 34
               

               Conread position:
               572-819
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               179
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               95, 50
               

               Conread position:
               580-808
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               92, 40
               

               Conread position:
               580-833
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               179
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               14, 67
               

               Conread position:
               593-864
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               215
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 257
               

               Conread position:
               608-862
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               196
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               58, 196
               

               Conread position:
               631-803
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               140
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               631-812
               

               Cow position:
               
               

               Alignm length:
               190
               

               Alignm identity:
               143
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               631-833
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               159
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               34, 58
               

               Conread position:
               631-834
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               155
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               86, 27
               

               Conread position:
               631-835
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               141, 27
               

               Conread position:
               631-848
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               635-833
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               30, 151
               

               Conread position:
               638-863
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               172
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               81, 30
               

               Conread position:
               641-834
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               21, 142
               

               Conread position:
               643-862
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               159
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               75, 13
               

               Conread position:
               646-832
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               140
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               71, 13
               

               Conread position:
               674-842
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               127
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               41, 77
               

               Conread position:
               685-839
               

               Cow position:
               
               

               Alignm length:
               161
               

               Alignm identity:
               122
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               686-862
               

               Cow position:
               
               

               Alignm length:
               180
               

               Alignm identity:
               136
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               35, 139
               

               Conread position:
               710-864
               

               Cow position:
               
               

               Alignm length:
               156
               

               Alignm identity:
               115
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               65, 129
               
Show alignments to all cow chromosomes.