Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8049J12.3
        

               Conread position:
               1-864
               

               Cow position:
               
               

               Alignm length:
               871
               

               Alignm identity:
               681
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 327
               

               Conread position:
               367-862
               

               Cow position:
               
               

               Alignm length:
               509
               

               Alignm identity:
               352
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 65
               

               Conread position:
               371-836
               

               Cow position:
               
               

               Alignm length:
               483
               

               Alignm identity:
               354
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 33
               

               Conread position:
               372-545
               

               Cow position:
               
               

               Alignm length:
               174
               

               Alignm identity:
               130
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               373-569
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               152
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               87, 123
               

               Conread position:
               374-836
               

               Cow position:
               
               

               Alignm length:
               483
               

               Alignm identity:
               317
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               29, 179
               

               Conread position:
               375-751
               

               Cow position:
               
               

               Alignm length:
               380
               

               Alignm identity:
               262
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               90, 7
               

               Conread position:
               380-560
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               83, 174
               

               Conread position:
               380-569
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               139
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               80, 165
               

               Conread position:
               381-631
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               185
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               67, 162
               

               Conread position:
               381-810
               

               Cow position:
               
               

               Alignm length:
               445
               

               Alignm identity:
               307
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 167
               

               Conread position:
               383-545
               

               Cow position:
               
               

               Alignm length:
               167
               

               Alignm identity:
               126
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               77, 39
               

               Conread position:
               383-607
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               77, 171
               

               Conread position:
               383-634
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               179
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               80, 170
               

               Conread position:
               383-810
               

               Cow position:
               
               

               Alignm length:
               435
               

               Alignm identity:
               300
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 17
               

               Conread position:
               383-819
               

               Cow position:
               
               

               Alignm length:
               454
               

               Alignm identity:
               317
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 64
               

               Conread position:
               383-864
               

               Cow position:
               
               

               Alignm length:
               490
               

               Alignm identity:
               342
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               196, 78
               

               Conread position:
               384-607
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               160
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               73, 157
               

               Conread position:
               384-607
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               79, 207
               

               Conread position:
               384-632
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               175
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               79, 165
               

               Conread position:
               384-634
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               178
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               77, 41
               

               Conread position:
               384-862
               

               Cow position:
               
               

               Alignm length:
               485
               

               Alignm identity:
               345
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 44
               

               Conread position:
               385-607
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               58, 161
               

               Conread position:
               386-862
               

               Cow position:
               
               

               Alignm length:
               487
               

               Alignm identity:
               335
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               254, 65
               

               Conread position:
               387-632
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               173
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               108, 50
               

               Conread position:
               388-624
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               176
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               35, 40
               

               Conread position:
               389-862
               

               Cow position:
               
               

               Alignm length:
               493
               

               Alignm identity:
               332
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               68, 58
               

               Conread position:
               396-634
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               64, 85
               

               Conread position:
               397-586
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               142
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               63, 108
               

               Conread position:
               414-835
               

               Cow position:
               
               

               Alignm length:
               439
               

               Alignm identity:
               314
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 141
               

               Conread position:
               414-862
               

               Cow position:
               
               

               Alignm length:
               463
               

               Alignm identity:
               322
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 114
               

               Conread position:
               442-634
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               148
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               23, 148
               

               Conread position:
               442-833
               

               Cow position:
               
               

               Alignm length:
               410
               

               Alignm identity:
               285
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               16, 49
               

               Conread position:
               444-836
               

               Cow position:
               
               

               Alignm length:
               413
               

               Alignm identity:
               280
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               15, 43
               

               Conread position:
               464-632
               

               Cow position:
               
               

               Alignm length:
               174
               

               Alignm identity:
               127
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               84, 25
               

               Conread position:
               482-629
               

               Cow position:
               
               

               Alignm length:
               150
               

               Alignm identity:
               113
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               87, 60
               

               Conread position:
               485-655
               

               Cow position:
               
               

               Alignm length:
               174
               

               Alignm identity:
               131
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               78, 62
               

               Conread position:
               494-815
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               223
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               76, 53
               

               Conread position:
               500-862
               

               Cow position:
               
               

               Alignm length:
               378
               

               Alignm identity:
               257
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               73, 12
               

               Conread position:
               501-855
               

               Cow position:
               
               

               Alignm length:
               371
               

               Alignm identity:
               267
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               68, 81
               

               Conread position:
               507-808
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               227
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               152, 31
               

               Conread position:
               543-839
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               220
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 9
               

               Conread position:
               560-831
               

               Cow position:
               
               

               Alignm length:
               282
               

               Alignm identity:
               214
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 24
               

               Conread position:
               562-808
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               180
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               18, 100
               

               Conread position:
               564-810
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               173
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               58, 11
               

               Conread position:
               572-862
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               203
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               73, 8
               

               Conread position:
               580-833
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               200
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               35, 25
               

               Conread position:
               585-806
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               166
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               75, 6
               

               Conread position:
               630-862
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               175
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               34, 57
               

               Conread position:
               631-833
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               154
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               87, 27
               

               Conread position:
               631-862
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               167
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               36, 215
               

               Conread position:
               631-862
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               171
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               39, 137
               

               Conread position:
               637-781
               

               Cow position:
               
               

               Alignm length:
               158
               

               Alignm identity:
               122
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               638-834
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               160
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               641-819
               

               Cow position:
               
               

               Alignm length:
               183
               

               Alignm identity:
               128
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               641-834
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               139
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               132, 27
               

               Conread position:
               641-862
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               163
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               27, 76
               

               Conread position:
               645-863
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               175
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               23, 200
               

               Conread position:
               646-808
               

               Cow position:
               
               

               Alignm length:
               165
               

               Alignm identity:
               126
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               71, 12
               

               Conread position:
               663-834
               

               Cow position:
               
               

               Alignm length:
               175
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               674-834
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               120
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               44, 141
               

               Conread position:
               684-864
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               135
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               34, 157
               

               Conread position:
               685-808
               

               Cow position:
               
               

               Alignm length:
               127
               

               Alignm identity:
               104
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               33, 66
               

               Conread position:
               685-836
               

               Cow position:
               
               

               Alignm length:
               157
               

               Alignm identity:
               117
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               685-863
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               143
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               33, 156
               

               Conread position:
               700-862
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               121
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               75, 136
               
Show alignments to all cow chromosomes.