Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8049J12.3
        

               Conread position:
               364-607
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               174
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               368-534
               

               Cow position:
               
               

               Alignm length:
               171
               

               Alignm identity:
               128
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               372-833
               

               Cow position:
               
               

               Alignm length:
               483
               

               Alignm identity:
               360
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 9
               

               Conread position:
               374-715
               

               Cow position:
               
               

               Alignm length:
               343
               

               Alignm identity:
               232
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               202, 78
               

               Conread position:
               378-807
               

               Cow position:
               
               

               Alignm length:
               450
               

               Alignm identity:
               313
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 35
               

               Conread position:
               380-607
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               155
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               85, 164
               

               Conread position:
               380-634
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               174
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               188, 77
               

               Conread position:
               380-634
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               180
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               80, 160
               

               Conread position:
               380-759
               

               Cow position:
               
               

               Alignm length:
               398
               

               Alignm identity:
               288
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               80, 166
               

               Conread position:
               381-607
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               162
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               79, 161
               

               Conread position:
               381-806
               

               Cow position:
               
               

               Alignm length:
               449
               

               Alignm identity:
               312
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 21
               

               Conread position:
               383-607
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               82, 167
               

               Conread position:
               383-607
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               164
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               77, 54
               

               Conread position:
               383-632
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               185
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               80, 56
               

               Conread position:
               383-731
               

               Cow position:
               
               

               Alignm length:
               357
               

               Alignm identity:
               251
               

               Alignm E-value:
               6.02558e-44
               

               Alignm gaps (pig, cow):
               77, 157
               

               Conread position:
               383-806
               

               Cow position:
               
               

               Alignm length:
               435
               

               Alignm identity:
               307
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 163
               

               Conread position:
               383-806
               

               Cow position:
               
               

               Alignm length:
               427
               

               Alignm identity:
               290
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               245, 159
               

               Conread position:
               383-833
               

               Cow position:
               
               

               Alignm length:
               463
               

               Alignm identity:
               349
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 172
               

               Conread position:
               383-859
               

               Cow position:
               
               

               Alignm length:
               496
               

               Alignm identity:
               354
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 57
               

               Conread position:
               383-859
               

               Cow position:
               
               

               Alignm length:
               511
               

               Alignm identity:
               338
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               88, 20
               

               Conread position:
               383-862
               

               Cow position:
               
               

               Alignm length:
               501
               

               Alignm identity:
               367
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               80, 94
               

               Conread position:
               384-535
               

               Cow position:
               
               

               Alignm length:
               155
               

               Alignm identity:
               112
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               79, 0
               

               Conread position:
               384-856
               

               Cow position:
               
               

               Alignm length:
               488
               

               Alignm identity:
               332
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 42
               

               Conread position:
               384-862
               

               Cow position:
               
               

               Alignm length:
               500
               

               Alignm identity:
               344
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 19
               

               Conread position:
               399-655
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               193
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               61, 185
               

               Conread position:
               414-833
               

               Cow position:
               
               

               Alignm length:
               439
               

               Alignm identity:
               309
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 141
               

               Conread position:
               436-836
               

               Cow position:
               
               

               Alignm length:
               408
               

               Alignm identity:
               264
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               24, 63
               

               Conread position:
               437-630
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               146
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               23, 116
               

               Conread position:
               442-837
               

               Cow position:
               
               

               Alignm length:
               403
               

               Alignm identity:
               295
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 103
               

               Conread position:
               443-634
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               137
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               109, 0
               

               Conread position:
               444-629
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               17, 96
               

               Conread position:
               444-759
               

               Cow position:
               
               

               Alignm length:
               333
               

               Alignm identity:
               240
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               459-725
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               189
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               100, 88
               

               Conread position:
               464-846
               

               Cow position:
               
               

               Alignm length:
               398
               

               Alignm identity:
               301
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 169
               

               Conread position:
               466-850
               

               Cow position:
               
               

               Alignm length:
               389
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               103, 22
               

               Conread position:
               485-761
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               212
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               139, 18
               

               Conread position:
               506-799
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               220
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               152, 36
               

               Conread position:
               509-780
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               202
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               40, 16
               

               Conread position:
               521-812
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               209
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               26, 32
               

               Conread position:
               542-832
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               221
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               38, 10
               

               Conread position:
               550-802
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               191
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               19, 32
               

               Conread position:
               556-833
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               198
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               12, 26
               

               Conread position:
               557-862
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               231
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               12, 25
               

               Conread position:
               585-862
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               215
               

               Alignm E-value:
               6.02558e-44
               

               Alignm gaps (pig, cow):
               81, 31
               

               Conread position:
               591-833
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               206
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               592-859
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               202
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               42, 253
               

               Conread position:
               593-834
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               174
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               41, 69
               

               Conread position:
               610-862
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               193
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               13, 149
               

               Conread position:
               618-812
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               138
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               28, 51
               

               Conread position:
               632-754
               

               Cow position:
               
               

               Alignm length:
               129
               

               Alignm identity:
               105
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               635-839
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               165
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               30, 171
               

               Conread position:
               639-833
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               27, 115
               

               Conread position:
               640-805
               

               Cow position:
               
               

               Alignm length:
               174
               

               Alignm identity:
               131
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               641-832
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               146
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               641-833
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               39, 77
               

               Conread position:
               649-808
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               127
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               69, 10
               

               Conread position:
               654-833
               

               Cow position:
               
               

               Alignm length:
               190
               

               Alignm identity:
               146
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               14, 173
               

               Conread position:
               664-844
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               54, 10
               
Show alignments to all cow chromosomes.