Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8049J12.3
        

               Conread position:
               373-633
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               179
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               87, 72
               

               Conread position:
               375-545
               

               Cow position:
               
               

               Alignm length:
               175
               

               Alignm identity:
               132
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               88, 48
               

               Conread position:
               375-617
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               170
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               9, 117
               

               Conread position:
               375-859
               

               Cow position:
               
               

               Alignm length:
               499
               

               Alignm identity:
               358
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               88, 7
               

               Conread position:
               377-634
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               192
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               83, 212
               

               Conread position:
               378-811
               

               Cow position:
               
               

               Alignm length:
               444
               

               Alignm identity:
               292
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               83, 205
               

               Conread position:
               379-533
               

               Cow position:
               
               

               Alignm length:
               158
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               81, 39
               

               Conread position:
               380-545
               

               Cow position:
               
               

               Alignm length:
               169
               

               Alignm identity:
               122
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               83, 108
               

               Conread position:
               380-607
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               164
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               80, 23
               

               Conread position:
               380-612
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               160
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               81, 113
               

               Conread position:
               380-630
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               180
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               380-633
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               192
               

               Alignm E-value:
               8.00141e-43
               

               Alignm gaps (pig, cow):
               80, 166
               

               Conread position:
               380-634
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               186
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               12, 125
               

               Conread position:
               380-773
               

               Cow position:
               
               

               Alignm length:
               400
               

               Alignm identity:
               267
               

               Alignm E-value:
               6.99949e-42
               

               Alignm gaps (pig, cow):
               60, 38
               

               Conread position:
               380-781
               

               Cow position:
               
               

               Alignm length:
               413
               

               Alignm identity:
               288
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               85, 60
               

               Conread position:
               380-833
               

               Cow position:
               
               

               Alignm length:
               458
               

               Alignm identity:
               306
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               83, 108
               

               Conread position:
               380-833
               

               Cow position:
               
               

               Alignm length:
               477
               

               Alignm identity:
               339
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 33
               

               Conread position:
               380-862
               

               Cow position:
               
               

               Alignm length:
               508
               

               Alignm identity:
               345
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               80, 161
               

               Conread position:
               381-615
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               87, 21
               

               Conread position:
               383-554
               

               Cow position:
               
               

               Alignm length:
               174
               

               Alignm identity:
               127
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               82, 156
               

               Conread position:
               383-567
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               132
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               80, 139
               

               Conread position:
               383-606
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               165
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               80, 173
               

               Conread position:
               383-621
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               173
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               77, 110
               

               Conread position:
               383-622
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               169
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               23, 166
               

               Conread position:
               383-623
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               173
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               383-632
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               185
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               79, 30
               

               Conread position:
               383-632
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               185
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               168, 20
               

               Conread position:
               383-634
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               190
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               81, 170
               

               Conread position:
               383-634
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               186
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               62, 206
               

               Conread position:
               383-634
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               180
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               80, 145
               

               Conread position:
               383-648
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               202
               

               Alignm E-value:
               6.99949e-42
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               383-686
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               220
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               80, 56
               

               Conread position:
               383-727
               

               Cow position:
               
               

               Alignm length:
               365
               

               Alignm identity:
               260
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               86, 29
               

               Conread position:
               383-800
               

               Cow position:
               
               

               Alignm length:
               429
               

               Alignm identity:
               291
               

               Alignm E-value:
               6.99949e-42
               

               Alignm gaps (pig, cow):
               78, 64
               

               Conread position:
               383-802
               

               Cow position:
               
               

               Alignm length:
               441
               

               Alignm identity:
               299
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               117, 49
               

               Conread position:
               383-833
               

               Cow position:
               
               

               Alignm length:
               461
               

               Alignm identity:
               322
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               77, 48
               

               Conread position:
               383-834
               

               Cow position:
               
               

               Alignm length:
               459
               

               Alignm identity:
               320
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               74, 25
               

               Conread position:
               383-834
               

               Cow position:
               
               

               Alignm length:
               471
               

               Alignm identity:
               341
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 158
               

               Conread position:
               383-849
               

               Cow position:
               
               

               Alignm length:
               473
               

               Alignm identity:
               325
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               186, 81
               

               Conread position:
               384-607
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               154
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               76, 115
               

               Conread position:
               384-612
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               166
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               76, 98
               

               Conread position:
               384-628
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               179
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               75, 107
               

               Conread position:
               384-633
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               187
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               36, 43
               

               Conread position:
               384-634
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               182
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               79, 134
               

               Conread position:
               384-850
               

               Cow position:
               
               

               Alignm length:
               478
               

               Alignm identity:
               347
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 36
               

               Conread position:
               385-578
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               80, 45
               

               Conread position:
               385-578
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               139
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               80, 45
               

               Conread position:
               385-632
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               179
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               75, 112
               

               Conread position:
               385-634
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               185
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               76, 169
               

               Conread position:
               385-836
               

               Cow position:
               
               

               Alignm length:
               464
               

               Alignm identity:
               312
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               37, 15
               

               Conread position:
               386-862
               

               Cow position:
               
               

               Alignm length:
               496
               

               Alignm identity:
               352
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               165, 92
               

               Conread position:
               389-682
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               216
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               25, 14
               

               Conread position:
               395-535
               

               Cow position:
               
               

               Alignm length:
               144
               

               Alignm identity:
               109
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               65, 97
               

               Conread position:
               396-775
               

               Cow position:
               
               

               Alignm length:
               396
               

               Alignm identity:
               285
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 41
               

               Conread position:
               413-631
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               172
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               16, 173
               

               Conread position:
               413-862
               

               Cow position:
               
               

               Alignm length:
               465
               

               Alignm identity:
               323
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 38
               

               Conread position:
               431-631
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               144
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               32, 91
               

               Conread position:
               436-863
               

               Cow position:
               
               

               Alignm length:
               445
               

               Alignm identity:
               324
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 60
               

               Conread position:
               437-618
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               142
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               23, 153
               

               Conread position:
               437-632
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               150
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               23, 116
               

               Conread position:
               440-657
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               168
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               20, 113
               

               Conread position:
               457-628
               

               Cow position:
               
               

               Alignm length:
               174
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               116, 31
               

               Conread position:
               457-723
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               204
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               204, 7
               

               Conread position:
               459-841
               

               Cow position:
               
               

               Alignm length:
               395
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 120
               

               Conread position:
               460-633
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               129
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               112, 22
               

               Conread position:
               462-659
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               150
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               483-634
               

               Cow position:
               
               

               Alignm length:
               154
               

               Alignm identity:
               117
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               86, 59
               

               Conread position:
               553-861
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               241
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               16, 28
               

               Conread position:
               572-828
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               201
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               89, 8
               

               Conread position:
               572-843
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               208
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               20, 8
               

               Conread position:
               580-836
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               190
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               88, 52
               

               Conread position:
               585-862
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               215
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               76, 122
               

               Conread position:
               591-839
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               179
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               46, 55
               

               Conread position:
               604-834
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               175
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               104, 190
               

               Conread position:
               606-863
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               190
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               23, 165
               

               Conread position:
               606-863
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               187
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               23, 165
               

               Conread position:
               610-804
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               155
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               51, 16
               

               Conread position:
               611-862
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               194
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               51, 174
               

               Conread position:
               622-864
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               181
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               19, 40
               

               Conread position:
               631-840
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               165
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               31, 175
               

               Conread position:
               633-809
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               32, 57
               

               Conread position:
               633-836
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               162
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               35, 26
               

               Conread position:
               634-836
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               171
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               634-861
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               178
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               28, 222
               

               Conread position:
               635-836
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               160
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               635-851
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               82, 23
               

               Conread position:
               637-836
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               136, 20
               

               Conread position:
               638-833
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               146
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               30, 52
               

               Conread position:
               640-848
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               28, 204
               

               Conread position:
               641-834
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               641-836
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               153
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               641-862
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               173
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               27, 140
               

               Conread position:
               644-834
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               148
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               74, 14
               

               Conread position:
               644-836
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               51, 14
               

               Conread position:
               645-834
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               154
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               75, 13
               

               Conread position:
               647-862
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               172
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               17, 204
               

               Conread position:
               650-856
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               158
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               22, 101
               

               Conread position:
               663-822
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               670-834
               

               Cow position:
               
               

               Alignm length:
               168
               

               Alignm identity:
               126
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               674-862
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               47, 171
               

               Conread position:
               681-808
               

               Cow position:
               
               

               Alignm length:
               132
               

               Alignm identity:
               105
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               685-839
               

               Cow position:
               
               

               Alignm length:
               158
               

               Alignm identity:
               119
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               32, 19
               
Show alignments to all cow chromosomes.