Cow genome map

Conread name: Ss1.1-Pig4-TMW8049J12.3

Conread position: 373-633
Cow position: chr2:67747746-67747994 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 179
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 87, 72

Conread position: 375-545
Cow position: chr2:16037545-16037717 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 132
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 88, 48

Conread position: 375-617
Cow position: chr2:62139150-62138912 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 170
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 9, 117

Conread position: 375-859
Cow position: chr2:63775788-63776267 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 7

Conread position: 377-634
Cow position: chr2:7428821-7429088 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 192
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 83, 212

Conread position: 378-811
Cow position: chr2:69431143-69431574 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 292
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 83, 205

Conread position: 379-533
Cow position: chr2:69872564-69872410 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 125
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 81, 39

Conread position: 380-545
Cow position: chr2:24721783-24721619 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 122
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 83, 108

Conread position: 380-607
Cow position: chr2:36881669-36881446 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 164
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 80, 23

Conread position: 380-612
Cow position: chr2:32977938-32977706 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 160
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 81, 113

Conread position: 380-630
Cow position: chr2:39519174-39519430 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 180
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 81, 0

Conread position: 380-633
Cow position: chr2:64104131-64104387 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 192
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 80, 166

Conread position: 380-634
Cow position: chr2:16137862-16138112 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 186
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 12, 125

Conread position: 380-773
Cow position: chr2:4904365-4904755 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 267
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 60, 38

Conread position: 380-781
Cow position: chr2:75845336-75845726 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 288
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 85, 60

Conread position: 380-833
Cow position: chr2:53702983-53702553 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 306
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 83, 108

Conread position: 380-833
Cow position: chr2:83940119-83939650 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 33

Conread position: 380-862
Cow position: chr2:40475562-40475065 (view UCSC Genome Browser custom track)
Alignm length: 508
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 161

Conread position: 381-615
Cow position: chr2:28892841-28892615 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 163
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 87, 21

Conread position: 383-554
Cow position: chr2:34582398-34582226 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 127
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 82, 156

Conread position: 383-567
Cow position: chr2:5861373-5861558 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 132
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 80, 139

Conread position: 383-606
Cow position: chr2:14513974-14514205 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 165
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 80, 173

Conread position: 383-621
Cow position: chr2:16273545-16273789 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 173
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 77, 110

Conread position: 383-622
Cow position: chr2:28011649-28011890 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 169
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 23, 166

Conread position: 383-623
Cow position: chr2:6610231-6609996 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 173
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 60, 0

Conread position: 383-632
Cow position: chr2:6352247-6351998 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 185
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 79, 30

Conread position: 383-632
Cow position: chr2:34871160-34870916 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 185
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 168, 20

Conread position: 383-634
Cow position: chr2:6322959-6322705 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 190
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 81, 170

Conread position: 383-634
Cow position: chr2:31376667-31376929 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 186
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 62, 206

Conread position: 383-634
Cow position: chr2:79449241-79448999 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 180
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 80, 145

Conread position: 383-648
Cow position: chr2:74083356-74083633 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 202
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 80, 0

Conread position: 383-686
Cow position: chr2:71595443-71595139 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 220
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 80, 56

Conread position: 383-727
Cow position: chr2:69397219-69397577 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 260
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 86, 29

Conread position: 383-800
Cow position: chr2:6588854-6588441 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 291
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 78, 64

Conread position: 383-802
Cow position: chr2:43830936-43830512 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 299
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 117, 49

Conread position: 383-833
Cow position: chr2:38964796-38965238 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 48

Conread position: 383-834
Cow position: chr2:2876757-2876322 (view UCSC Genome Browser custom track)
Alignm length: 459
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 25

Conread position: 383-834
Cow position: chr2:8364956-8364500 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 158

Conread position: 383-849
Cow position: chr2:1148810-1148351 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 186, 81

Conread position: 384-607
Cow position: chr2:49147784-49148005 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 154
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 76, 115

Conread position: 384-612
Cow position: chr2:3534198-3533978 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 166
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 76, 98

Conread position: 384-628
Cow position: chr2:14921058-14921293 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 179
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 75, 107

Conread position: 384-633
Cow position: chr2:53353628-53353377 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 187
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 36, 43

Conread position: 384-634
Cow position: chr2:19793049-19793285 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 182
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 79, 134

Conread position: 384-850
Cow position: chr2:33012753-33012289 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 36

Conread position: 385-578
Cow position: chr2:8997837-8997641 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 138
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 80, 45

Conread position: 385-578
Cow position: chr2:9300592-9300788 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 139
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 80, 45

Conread position: 385-632
Cow position: chr2:10827934-10827689 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 179
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 75, 112

Conread position: 385-634
Cow position: chr2:16483655-16483405 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 185
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 76, 169

Conread position: 385-836
Cow position: chr2:10245621-10245180 (view UCSC Genome Browser custom track)
Alignm length: 464
Alignm identity: 312
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 37, 15

Conread position: 386-862
Cow position: chr2:43487947-43487459 (view UCSC Genome Browser custom track)
Alignm length: 496
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 92

Conread position: 389-682
Cow position: chr2:38953476-38953785 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 216
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 25, 14

Conread position: 395-535
Cow position: chr2:877834-877692 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 109
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 65, 97

Conread position: 396-775
Cow position: chr2:58682567-58682956 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 41

Conread position: 413-631
Cow position: chr2:9180606-9180832 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 172
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 16, 173

Conread position: 413-862
Cow position: chr2:12537684-12537229 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 38

Conread position: 431-631
Cow position: chr2:62249252-62249446 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 144
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 32, 91

Conread position: 436-863
Cow position: chr2:36321007-36320579 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 60

Conread position: 437-618
Cow position: chr2:39654407-39654213 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 142
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 23, 153

Conread position: 437-632
Cow position: chr2:23935700-23935905 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 150
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 23, 116

Conread position: 440-657
Cow position: chr2:76012992-76013211 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 168
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 20, 113

Conread position: 457-628
Cow position: chr2:78105633-78105800 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 129
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 116, 31

Conread position: 457-723
Cow position: chr2:33530859-33530590 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 204
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 204, 7

Conread position: 459-841
Cow position: chr2:10798225-10798614 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 120

Conread position: 460-633
Cow position: chr2:25402778-25402948 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 129
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 112, 22

Conread position: 462-659
Cow position: chr2:8615605-8615798 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 150
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 78, 0

Conread position: 483-634
Cow position: chr2:74085752-74085601 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 117
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 86, 59

Conread position: 553-861
Cow position: chr2:6954125-6953811 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 241
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 16, 28

Conread position: 572-828
Cow position: chr2:1222314-1222577 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 201
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 89, 8

Conread position: 572-843
Cow position: chr2:42305413-42305137 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 208
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 20, 8

Conread position: 580-836
Cow position: chr2:69872078-69871820 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 190
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 88, 52

Conread position: 585-862
Cow position: chr2:19833456-19833170 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 215
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 76, 122

Conread position: 591-839
Cow position: chr2:14604465-14604219 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 179
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 46, 55

Conread position: 604-834
Cow position: chr2:63193480-63193247 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 175
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 104, 190

Conread position: 606-863
Cow position: chr2:8997092-8996831 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 190
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 23, 165

Conread position: 606-863
Cow position: chr2:9301337-9301599 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 187
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 23, 165

Conread position: 610-804
Cow position: chr2:31947677-31947468 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 155
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 51, 16

Conread position: 611-862
Cow position: chr2:39650072-39649800 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 194
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 51, 174

Conread position: 622-864
Cow position: chr2:876767-876525 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 181
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 19, 40

Conread position: 631-840
Cow position: chr2:69394046-69393821 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 165
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 31, 175

Conread position: 633-809
Cow position: chr2:6320662-6320479 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 139
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 32, 57

Conread position: 633-836
Cow position: chr2:32977411-32977204 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 162
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 35, 26

Conread position: 634-836
Cow position: chr2:21599624-21599403 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 171
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 39, 0

Conread position: 634-861
Cow position: chr2:31378829-31379072 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 178
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 28, 222

Conread position: 635-836
Cow position: chr2:33830669-33830453 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 160
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 26, 0

Conread position: 635-851
Cow position: chr2:55038540-55038321 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 159
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 82, 23

Conread position: 637-836
Cow position: chr2:46386806-46386610 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 146
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 136, 20

Conread position: 638-833
Cow position: chr2:14923362-14923562 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 146
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 30, 52

Conread position: 640-848
Cow position: chr2:16037767-16037980 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 162
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 28, 204

Conread position: 641-834
Cow position: chr2:62252122-62252324 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 152
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 27, 0

Conread position: 641-836
Cow position: chr2:53351394-53351194 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 153
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 27, 0

Conread position: 641-862
Cow position: chr2:16140779-16141002 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 173
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 27, 140

Conread position: 644-834
Cow position: chr2:9328774-9328583 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 148
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 74, 14

Conread position: 644-836
Cow position: chr2:18990551-18990363 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 141
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 51, 14

Conread position: 645-834
Cow position: chr2:28011888-28012080 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 154
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 75, 13

Conread position: 647-862
Cow position: chr2:45434325-45434549 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 172
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 17, 204

Conread position: 650-856
Cow position: chr2:30817156-30817364 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 158
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 22, 101

Conread position: 663-822
Cow position: chr2:12549667-12549830 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 126
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 55, 0

Conread position: 670-834
Cow position: chr2:45300559-45300392 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 126
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 54, 0

Conread position: 674-862
Cow position: chr2:36097692-36097883 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 143
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 47, 171

Conread position: 681-808
Cow position: chr2:38954042-38954173 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 105
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 37, 0

Conread position: 685-839
Cow position: chr2:10827676-10827522 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 119
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 32, 19

Show alignments to all cow chromosomes.