Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8049J12.3 |
| Conread position: | 364-862 |
| Cow position: | chr20:19271277-19271796 (view UCSC Genome Browser custom track) |
| Alignm length: | 525 |
| Alignm identity: | 392 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 222 |
| Conread position: | 374-862 |
| Cow position: | chr20:21500666-21501162 (view UCSC Genome Browser custom track) |
| Alignm length: | 508 |
| Alignm identity: | 360 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 57 |
| Conread position: | 374-862 |
| Cow position: | chr20:35629895-35630393 (view UCSC Genome Browser custom track) |
| Alignm length: | 505 |
| Alignm identity: | 351 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 86, 171 |
| Conread position: | 375-607 |
| Cow position: | chr20:8214148-8213921 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 167 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 85, 106 |
| Conread position: | 378-567 |
| Cow position: | chr20:8306824-8307016 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 19, 162 |
| Conread position: | 380-632 |
| Cow position: | chr20:1109579-1109836 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 177 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 76, 175 |
| Conread position: | 383-516 |
| Cow position: | chr20:380170-380034 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 107 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 383-808 |
| Cow position: | chr20:8860617-8861053 (view UCSC Genome Browser custom track) |
| Alignm length: | 446 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 39 |
| Conread position: | 383-830 |
| Cow position: | chr20:26855312-26854880 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 186, 80 |
| Conread position: | 383-833 |
| Cow position: | chr20:24693740-24693261 (view UCSC Genome Browser custom track) |
| Alignm length: | 484 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 153 |
| Conread position: | 383-834 |
| Cow position: | chr20:16991284-16990829 (view UCSC Genome Browser custom track) |
| Alignm length: | 466 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 41 |
| Conread position: | 383-834 |
| Cow position: | chr20:41317238-41317703 (view UCSC Genome Browser custom track) |
| Alignm length: | 472 |
| Alignm identity: | 312 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 39, 179 |
| Conread position: | 383-838 |
| Cow position: | chr20:25406136-25405688 (view UCSC Genome Browser custom track) |
| Alignm length: | 468 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 82 |
| Conread position: | 383-862 |
| Cow position: | chr20:33094869-33095337 (view UCSC Genome Browser custom track) |
| Alignm length: | 488 |
| Alignm identity: | 319 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 78, 39 |
| Conread position: | 384-596 |
| Cow position: | chr20:4695169-4694946 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 158 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 8, 178 |
| Conread position: | 384-683 |
| Cow position: | chr20:36928808-36929106 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 216 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 81, 169 |
| Conread position: | 384-798 |
| Cow position: | chr20:13685149-13684727 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 176 |
| Conread position: | 387-604 |
| Cow position: | chr20:22865428-22865210 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 160 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 73, 11 |
| Conread position: | 387-777 |
| Cow position: | chr20:7796169-7796569 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 168 |
| Conread position: | 388-832 |
| Cow position: | chr20:30702119-30701673 (view UCSC Genome Browser custom track) |
| Alignm length: | 462 |
| Alignm identity: | 310 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 61, 102 |
| Conread position: | 413-634 |
| Cow position: | chr20:22656543-22656762 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 158 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 156, 51 |
| Conread position: | 425-862 |
| Cow position: | chr20:36758633-36758187 (view UCSC Genome Browser custom track) |
| Alignm length: | 461 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 120 |
| Conread position: | 436-631 |
| Cow position: | chr20:2973153-2973344 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 29, 104 |
| Conread position: | 494-836 |
| Cow position: | chr20:42868951-42869283 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 240 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 82, 15 |
| Conread position: | 541-784 |
| Cow position: | chr20:42430901-42430656 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 32, 11 |
| Conread position: | 556-863 |
| Cow position: | chr20:7861914-7862235 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 231 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 14, 22 |
| Conread position: | 579-833 |
| Cow position: | chr20:34311238-34311507 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 201 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 579-837 |
| Cow position: | chr20:2834026-2834278 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 192 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 170, 66 |
| Conread position: | 579-862 |
| Cow position: | chr20:6053247-6052960 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 207 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 55, 202 |
| Conread position: | 585-807 |
| Cow position: | chr20:30827391-30827154 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 179 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 76, 166 |
| Conread position: | 587-821 |
| Cow position: | chr20:37170100-37169847 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 186 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 75, 41 |
| Conread position: | 634-808 |
| Cow position: | chr20:10724355-10724178 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 38, 83 |
| Conread position: | 634-836 |
| Cow position: | chr20:2975226-2975427 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 83, 27 |
| Conread position: | 635-862 |
| Cow position: | chr20:25303511-25303294 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 138, 23 |
| Conread position: | 639-862 |
| Cow position: | chr20:19443099-19443317 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 173 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 27, 19 |
| Conread position: | 686-832 |
| Cow position: | chr20:37147134-37147283 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 114 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 14, 132 |
Show alignments to all cow chromosomes.