Cow genome map

Conread name: Ss1.1-Pig4-TMW8049J12.3

Conread position: 361-834
Cow position: chr22:23748195-23748684 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 19

Conread position: 364-634
Cow position: chr22:14052101-14051822 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 191
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 104, 10

Conread position: 372-634
Cow position: chr22:45847480-45847748 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 192
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 6, 54

Conread position: 373-632
Cow position: chr22:39744583-39744840 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 191
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 87, 33

Conread position: 374-585
Cow position: chr22:39385125-39385330 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 154
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 86, 6

Conread position: 374-771
Cow position: chr22:46733080-46732669 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 267
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 62, 53

Conread position: 378-634
Cow position: chr22:10726149-10726393 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 188
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 85, 31

Conread position: 379-715
Cow position: chr22:4700128-4699791 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 238
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 81, 201

Conread position: 380-607
Cow position: chr22:3025798-3026019 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 165
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 79, 29

Conread position: 380-659
Cow position: chr22:5265039-5265305 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 202
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 90, 42

Conread position: 380-808
Cow position: chr22:25259122-25258698 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 132

Conread position: 380-829
Cow position: chr22:27642463-27642904 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 119

Conread position: 380-834
Cow position: chr22:6246317-6246787 (view UCSC Genome Browser custom track)
Alignm length: 474
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 209

Conread position: 381-569
Cow position: chr22:44237856-44237671 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 136
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 92, 139

Conread position: 381-635
Cow position: chr22:26809-26547 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 190
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 83, 33

Conread position: 381-811
Cow position: chr22:37376552-37376132 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 300
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 69, 87

Conread position: 381-862
Cow position: chr22:20171433-20170963 (view UCSC Genome Browser custom track)
Alignm length: 494
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 108

Conread position: 383-807
Cow position: chr22:43779903-43779480 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 158

Conread position: 383-808
Cow position: chr22:47449645-47449217 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 277
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 81, 27

Conread position: 383-858
Cow position: chr22:39636868-39637294 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 316
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 194, 58

Conread position: 384-545
Cow position: chr22:14511863-14511696 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 124
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 74, 0

Conread position: 384-591
Cow position: chr22:11704354-11704150 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 150
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 79, 112

Conread position: 384-629
Cow position: chr22:11669325-11669083 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 173
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 76, 112

Conread position: 384-633
Cow position: chr22:24144660-24144912 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 170
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 73, 157

Conread position: 384-831
Cow position: chr22:25123849-25123398 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 129

Conread position: 385-634
Cow position: chr22:3077746-3077508 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 174
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 207, 76

Conread position: 387-751
Cow position: chr22:12355001-12355369 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 250
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 76, 115

Conread position: 391-631
Cow position: chr22:27734802-27735047 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 180
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 68, 172

Conread position: 402-839
Cow position: chr22:27571749-27572177 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 83

Conread position: 413-608
Cow position: chr22:16321892-16321700 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 141
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 47, 136

Conread position: 414-829
Cow position: chr22:23706020-23705601 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 55

Conread position: 415-834
Cow position: chr22:25662935-25662504 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 143

Conread position: 444-808
Cow position: chr22:17686468-17686851 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 96

Conread position: 461-808
Cow position: chr22:39341690-39342032 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 246
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 81, 119

Conread position: 464-631
Cow position: chr22:19052920-19053087 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 124
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 107, 73

Conread position: 464-632
Cow position: chr22:44085837-44086004 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 128
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 105, 28

Conread position: 572-833
Cow position: chr22:4244815-4244560 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 191
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 79, 8

Conread position: 572-836
Cow position: chr22:47429827-47430092 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 197
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 92, 5

Conread position: 579-841
Cow position: chr22:25767011-25766739 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 203
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 56, 0

Conread position: 580-864
Cow position: chr22:28588586-28588313 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 195
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 88, 10

Conread position: 581-808
Cow position: chr22:4079124-4078885 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 176
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 5, 0

Conread position: 594-802
Cow position: chr22:40530722-40530935 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 159
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 54, 26

Conread position: 594-833
Cow position: chr22:39901953-39901702 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 194
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 68, 25

Conread position: 624-862
Cow position: chr22:37199249-37199494 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 189
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 37, 223

Conread position: 631-833
Cow position: chr22:27041238-27041016 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 160
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 33, 0

Conread position: 635-834
Cow position: chr22:10811154-10810961 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 149
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 38, 123

Conread position: 635-864
Cow position: chr22:44087896-44088134 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 176
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 30, 176

Conread position: 636-798
Cow position: chr22:19055110-19055285 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 132
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 28, 0

Conread position: 640-862
Cow position: chr22:21666398-21666171 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 170
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 28, 115

Conread position: 641-802
Cow position: chr22:14511636-14511469 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 127
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 22, 0

Conread position: 644-863
Cow position: chr22:41371752-41371972 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 161
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 74, 19

Conread position: 644-864
Cow position: chr22:10726729-10726944 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 166
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 24, 71

Conread position: 647-818
Cow position: chr22:22001163-22000989 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 131
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 70, 9

Conread position: 663-852
Cow position: chr22:3072580-3072389 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 145
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 11, 141

Conread position: 685-818
Cow position: chr22:27735061-27735197 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 104
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 33, 0

Show alignments to all cow chromosomes.