Cow genome map

Conread name: Ss1.1-Pig4-TMW8049J12.3

Conread position: 372-546
Cow position:
Alignm length: 178
Alignm identity: 134
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 86, 156

Conread position: 375-596
Cow position:
Alignm length: 227
Alignm identity: 164
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 88, 106

Conread position: 375-634
Cow position:
Alignm length: 263
Alignm identity: 185
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 88, 114

Conread position: 375-808
Cow position:
Alignm length: 443
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 117

Conread position: 379-857
Cow position:
Alignm length: 497
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 178

Conread position: 380-550
Cow position:
Alignm length: 173
Alignm identity: 123
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 80, 38

Conread position: 380-715
Cow position:
Alignm length: 345
Alignm identity: 243
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 77, 161

Conread position: 380-771
Cow position:
Alignm length: 401
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 31

Conread position: 380-833
Cow position:
Alignm length: 472
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 46

Conread position: 380-834
Cow position:
Alignm length: 494
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 175, 26

Conread position: 380-858
Cow position:
Alignm length: 490
Alignm identity: 321
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 92, 44

Conread position: 383-560
Cow position:
Alignm length: 186
Alignm identity: 133
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 77, 0

Conread position: 383-580
Cow position:
Alignm length: 203
Alignm identity: 145
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 77, 110

Conread position: 383-607
Cow position:
Alignm length: 235
Alignm identity: 162
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 62, 174

Conread position: 383-620
Cow position:
Alignm length: 243
Alignm identity: 167
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 8, 32

Conread position: 383-634
Cow position:
Alignm length: 259
Alignm identity: 196
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 36, 124

Conread position: 383-634
Cow position:
Alignm length: 256
Alignm identity: 183
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 82, 64

Conread position: 383-651
Cow position:
Alignm length: 274
Alignm identity: 182
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 124, 147

Conread position: 383-833
Cow position:
Alignm length: 467
Alignm identity: 314
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 12, 63

Conread position: 383-834
Cow position:
Alignm length: 473
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 205

Conread position: 384-607
Cow position:
Alignm length: 227
Alignm identity: 158
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 144, 84

Conread position: 384-828
Cow position:
Alignm length: 483
Alignm identity: 334
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 74, 29

Conread position: 384-836
Cow position:
Alignm length: 467
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 174

Conread position: 384-843
Cow position:
Alignm length: 480
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 120

Conread position: 385-545
Cow position:
Alignm length: 165
Alignm identity: 120
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 78, 0

Conread position: 385-569
Cow position:
Alignm length: 188
Alignm identity: 135
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 78, 168

Conread position: 385-808
Cow position:
Alignm length: 452
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 182

Conread position: 386-861
Cow position:
Alignm length: 486
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 165

Conread position: 390-808
Cow position:
Alignm length: 440
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 63

Conread position: 391-605
Cow position:
Alignm length: 220
Alignm identity: 158
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 72, 57

Conread position: 397-808
Cow position:
Alignm length: 433
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 196

Conread position: 413-641
Cow position:
Alignm length: 233
Alignm identity: 166
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 53, 144

Conread position: 413-819
Cow position:
Alignm length: 421
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 98

Conread position: 423-634
Cow position:
Alignm length: 218
Alignm identity: 164
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 42, 93

Conread position: 444-836
Cow position:
Alignm length: 411
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 110

Conread position: 457-864
Cow position:
Alignm length: 435
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 22

Conread position: 464-634
Cow position:
Alignm length: 171
Alignm identity: 128
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 86, 0

Conread position: 464-830
Cow position:
Alignm length: 378
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 55

Conread position: 475-815
Cow position:
Alignm length: 352
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 41

Conread position: 505-769
Cow position:
Alignm length: 271
Alignm identity: 188
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 64, 37

Conread position: 509-833
Cow position:
Alignm length: 332
Alignm identity: 232
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 58, 43

Conread position: 509-864
Cow position:
Alignm length: 369
Alignm identity: 254
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 60, 38

Conread position: 546-836
Cow position:
Alignm length: 301
Alignm identity: 201
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 27, 35

Conread position: 556-824
Cow position:
Alignm length: 277
Alignm identity: 205
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 9, 24

Conread position: 572-862
Cow position:
Alignm length: 298
Alignm identity: 212
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 20, 5

Conread position: 590-810
Cow position:
Alignm length: 231
Alignm identity: 165
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 36, 0

Conread position: 597-862
Cow position:
Alignm length: 280
Alignm identity: 195
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 71, 35

Conread position: 633-848
Cow position:
Alignm length: 218
Alignm identity: 154
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 203, 142

Conread position: 641-833
Cow position:
Alignm length: 202
Alignm identity: 149
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 27, 73

Conread position: 641-834
Cow position:
Alignm length: 202
Alignm identity: 152
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 79, 34

Conread position: 685-833
Cow position:
Alignm length: 153
Alignm identity: 121
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 33, 0

Show alignments to all cow chromosomes.