Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8049J12.3 |
| Conread position: | 160-798 |
| Cow position: | chr27:4065307-4064662 (view UCSC Genome Browser custom track) |
| Alignm length: | 653 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 303, 366 |
| Conread position: | 373-545 |
| Cow position: | chr27:18406926-18406747 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 128 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 377-821 |
| Cow position: | chr27:7207880-7208312 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 37 |
| Conread position: | 380-598 |
| Cow position: | chr27:20560006-20559789 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 156 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 80, 118 |
| Conread position: | 383-545 |
| Cow position: | chr27:11152000-11151835 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 119 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 383-597 |
| Cow position: | chr27:24386591-24386377 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 77, 110 |
| Conread position: | 383-632 |
| Cow position: | chr27:5468915-5469167 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 178 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 14, 69 |
| Conread position: | 383-753 |
| Cow position: | chr27:10003195-10002836 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 255 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 187, 60 |
| Conread position: | 384-621 |
| Cow position: | chr27:23323374-23323609 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 163 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 76, 119 |
| Conread position: | 384-658 |
| Cow position: | chr27:6099683-6099969 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 201 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 44, 131 |
| Conread position: | 385-630 |
| Cow position: | chr27:29484433-29484671 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 388-632 |
| Cow position: | chr27:20132524-20132284 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 179 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 72, 134 |
| Conread position: | 413-835 |
| Cow position: | chr27:26070947-26071371 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 286 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 47, 139 |
| Conread position: | 459-807 |
| Cow position: | chr27:16536953-16537288 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 242 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 208, 75 |
| Conread position: | 475-770 |
| Cow position: | chr27:12645493-12645770 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 213 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 114, 72 |
| Conread position: | 475-780 |
| Cow position: | chr27:22025782-22025484 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 210 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 61, 93 |
| Conread position: | 496-818 |
| Cow position: | chr27:7017152-7017469 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 222 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 25, 54 |
| Conread position: | 503-833 |
| Cow position: | chr27:14242805-14242465 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 35 |
| Conread position: | 529-862 |
| Cow position: | chr27:15011529-15011203 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 236 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 133, 42 |
| Conread position: | 563-862 |
| Cow position: | chr27:11151274-11150971 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 219 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 94, 14 |
| Conread position: | 581-808 |
| Cow position: | chr27:4146266-4146504 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 180 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 83, 9 |
| Conread position: | 585-834 |
| Cow position: | chr27:17850372-17850628 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 188 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 50, 77 |
| Conread position: | 631-845 |
| Cow position: | chr27:15226453-15226661 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 155 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 37, 136 |
| Conread position: | 635-808 |
| Cow position: | chr27:7029233-7029411 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 32, 60 |
| Conread position: | 636-864 |
| Cow position: | chr27:31468021-31467797 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 169 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 71, 32 |
| Conread position: | 641-834 |
| Cow position: | chr27:11055725-11055522 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 151 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 32, 157 |
| Conread position: | 641-862 |
| Cow position: | chr27:15124035-15123818 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 27, 81 |
| Conread position: | 644-834 |
| Cow position: | chr27:22437118-22436928 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 139 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 73, 14 |
| Conread position: | 644-861 |
| Cow position: | chr27:24151520-24151734 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 74, 12 |
| Conread position: | 645-836 |
| Cow position: | chr27:6669371-6669564 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 145 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 23, 175 |
| Conread position: | 651-864 |
| Cow position: | chr27:29487706-29487924 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 158 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 17, 194 |
| Conread position: | 673-862 |
| Cow position: | chr27:11654348-11654162 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 47, 13 |
| Conread position: | 683-862 |
| Cow position: | chr27:6099928-6100105 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 135 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 18, 38 |
Show alignments to all cow chromosomes.