Cow genome map
Conread name: | Ss1.1-Pig4-TMW8049J12.3 |
Conread position: | 369-569 |
Cow position: | chr3:9674678-9674475 (view UCSC Genome Browser custom track) |
Alignm length: | 205 |
Alignm identity: | 142 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 91, 172 |
Conread position: | 369-625 |
Cow position: | chr3:1015726-1015470 (view UCSC Genome Browser custom track) |
Alignm length: | 264 |
Alignm identity: | 181 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 91, 128 |
Conread position: | 373-633 |
Cow position: | chr3:58637384-58637133 (view UCSC Genome Browser custom track) |
Alignm length: | 266 |
Alignm identity: | 185 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 9, 105 |
Conread position: | 373-634 |
Cow position: | chr3:9431453-9431193 (view UCSC Genome Browser custom track) |
Alignm length: | 265 |
Alignm identity: | 191 |
Alignm E-value: | 5.99994e-41 |
Alignm gaps (pig, cow): | 5, 172 |
Conread position: | 374-534 |
Cow position: | chr3:45635264-45635100 (view UCSC Genome Browser custom track) |
Alignm length: | 165 |
Alignm identity: | 120 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 8, 0 |
Conread position: | 375-588 |
Cow position: | chr3:50289712-50289926 (view UCSC Genome Browser custom track) |
Alignm length: | 218 |
Alignm identity: | 149 |
Alignm E-value: | 8e-23 |
Alignm gaps (pig, cow): | 7, 171 |
Conread position: | 377-534 |
Cow position: | chr3:26648204-26648046 (view UCSC Genome Browser custom track) |
Alignm length: | 161 |
Alignm identity: | 121 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 83, 104 |
Conread position: | 377-632 |
Cow position: | chr3:57970712-57970452 (view UCSC Genome Browser custom track) |
Alignm length: | 267 |
Alignm identity: | 183 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 76, 36 |
Conread position: | 379-622 |
Cow position: | chr3:60284016-60284262 (view UCSC Genome Browser custom track) |
Alignm length: | 249 |
Alignm identity: | 172 |
Alignm E-value: | 6e-30 |
Alignm gaps (pig, cow): | 79, 181 |
Conread position: | 379-804 |
Cow position: | chr3:39976798-39977205 (view UCSC Genome Browser custom track) |
Alignm length: | 432 |
Alignm identity: | 297 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 81, 102 |
Conread position: | 380-549 |
Cow position: | chr3:65385280-65385448 (view UCSC Genome Browser custom track) |
Alignm length: | 172 |
Alignm identity: | 127 |
Alignm E-value: | 3e-25 |
Alignm gaps (pig, cow): | 78, 67 |
Conread position: | 380-606 |
Cow position: | chr3:72915123-72915349 (view UCSC Genome Browser custom track) |
Alignm length: | 233 |
Alignm identity: | 167 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 80, 33 |
Conread position: | 380-608 |
Cow position: | chr3:84020346-84020122 (view UCSC Genome Browser custom track) |
Alignm length: | 232 |
Alignm identity: | 162 |
Alignm E-value: | 4e-26 |
Alignm gaps (pig, cow): | 80, 33 |
Conread position: | 380-631 |
Cow position: | chr3:72592648-72592890 (view UCSC Genome Browser custom track) |
Alignm length: | 255 |
Alignm identity: | 177 |
Alignm E-value: | 4e-27 |
Alignm gaps (pig, cow): | 83, 119 |
Conread position: | 380-634 |
Cow position: | chr3:47471034-47471286 (view UCSC Genome Browser custom track) |
Alignm length: | 259 |
Alignm identity: | 181 |
Alignm E-value: | 7e-31 |
Alignm gaps (pig, cow): | 72, 174 |
Conread position: | 380-808 |
Cow position: | chr3:28561098-28560661 (view UCSC Genome Browser custom track) |
Alignm length: | 447 |
Alignm identity: | 316 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 80, 167 |
Conread position: | 380-833 |
Cow position: | chr3:947268-946809 (view UCSC Genome Browser custom track) |
Alignm length: | 474 |
Alignm identity: | 339 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 74, 95 |
Conread position: | 380-864 |
Cow position: | chr3:75618787-75619272 (view UCSC Genome Browser custom track) |
Alignm length: | 500 |
Alignm identity: | 358 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 85, 8 |
Conread position: | 381-629 |
Cow position: | chr3:1997861-1997597 (view UCSC Genome Browser custom track) |
Alignm length: | 267 |
Alignm identity: | 190 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 34, 172 |
Conread position: | 381-657 |
Cow position: | chr3:59577332-59577608 (view UCSC Genome Browser custom track) |
Alignm length: | 283 |
Alignm identity: | 208 |
Alignm E-value: | 2.8026e-45 |
Alignm gaps (pig, cow): | 44, 29 |
Conread position: | 383-520 |
Cow position: | chr3:3794081-3794221 (view UCSC Genome Browser custom track) |
Alignm length: | 141 |
Alignm identity: | 107 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 80, 0 |
Conread position: | 383-583 |
Cow position: | chr3:50594226-50594026 (view UCSC Genome Browser custom track) |
Alignm length: | 206 |
Alignm identity: | 143 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 82, 30 |
Conread position: | 383-634 |
Cow position: | chr3:38333292-38333547 (view UCSC Genome Browser custom track) |
Alignm length: | 257 |
Alignm identity: | 187 |
Alignm E-value: | 6.99949e-42 |
Alignm gaps (pig, cow): | 77, 170 |
Conread position: | 383-836 |
Cow position: | chr3:83233356-83233803 (view UCSC Genome Browser custom track) |
Alignm length: | 467 |
Alignm identity: | 325 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 80, 22 |
Conread position: | 383-861 |
Cow position: | chr3:55473913-55474408 (view UCSC Genome Browser custom track) |
Alignm length: | 501 |
Alignm identity: | 341 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 9, 82 |
Conread position: | 384-567 |
Cow position: | chr3:81057157-81056976 (view UCSC Genome Browser custom track) |
Alignm length: | 185 |
Alignm identity: | 131 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 158, 38 |
Conread position: | 384-605 |
Cow position: | chr3:41735129-41734918 (view UCSC Genome Browser custom track) |
Alignm length: | 222 |
Alignm identity: | 159 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 19, 0 |
Conread position: | 384-634 |
Cow position: | chr3:77776246-77776500 (view UCSC Genome Browser custom track) |
Alignm length: | 258 |
Alignm identity: | 187 |
Alignm E-value: | 1e-37 |
Alignm gaps (pig, cow): | 127, 109 |
Conread position: | 384-640 |
Cow position: | chr3:52156530-52156271 (view UCSC Genome Browser custom track) |
Alignm length: | 265 |
Alignm identity: | 178 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 77, 165 |
Conread position: | 384-759 |
Cow position: | chr3:28236879-28237257 (view UCSC Genome Browser custom track) |
Alignm length: | 395 |
Alignm identity: | 270 |
Alignm E-value: | 8e-33 |
Alignm gaps (pig, cow): | 76, 38 |
Conread position: | 384-813 |
Cow position: | chr3:73155117-73154663 (view UCSC Genome Browser custom track) |
Alignm length: | 457 |
Alignm identity: | 319 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 77, 101 |
Conread position: | 384-833 |
Cow position: | chr3:53399639-53399202 (view UCSC Genome Browser custom track) |
Alignm length: | 458 |
Alignm identity: | 298 |
Alignm E-value: | 1e-34 |
Alignm gaps (pig, cow): | 19, 30 |
Conread position: | 384-834 |
Cow position: | chr3:33614715-33614272 (view UCSC Genome Browser custom track) |
Alignm length: | 457 |
Alignm identity: | 335 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 72, 81 |
Conread position: | 384-862 |
Cow position: | chr3:74227931-74227449 (view UCSC Genome Browser custom track) |
Alignm length: | 495 |
Alignm identity: | 337 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 78, 182 |
Conread position: | 387-632 |
Cow position: | chr3:59814248-59813992 (view UCSC Genome Browser custom track) |
Alignm length: | 258 |
Alignm identity: | 181 |
Alignm E-value: | 2e-30 |
Alignm gaps (pig, cow): | 62, 202 |
Conread position: | 388-634 |
Cow position: | chr3:8528867-8529111 (view UCSC Genome Browser custom track) |
Alignm length: | 251 |
Alignm identity: | 178 |
Alignm E-value: | 9e-34 |
Alignm gaps (pig, cow): | 75, 152 |
Conread position: | 389-633 |
Cow position: | chr3:26382109-26382351 (view UCSC Genome Browser custom track) |
Alignm length: | 250 |
Alignm identity: | 185 |
Alignm E-value: | 1e-37 |
Alignm gaps (pig, cow): | 72, 58 |
Conread position: | 396-634 |
Cow position: | chr3:9631319-9631559 (view UCSC Genome Browser custom track) |
Alignm length: | 244 |
Alignm identity: | 175 |
Alignm E-value: | 1e-34 |
Alignm gaps (pig, cow): | 69, 144 |
Conread position: | 399-839 |
Cow position: | chr3:32764291-32764713 (view UCSC Genome Browser custom track) |
Alignm length: | 448 |
Alignm identity: | 308 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 65, 97 |
Conread position: | 413-836 |
Cow position: | chr3:15566667-15566244 (view UCSC Genome Browser custom track) |
Alignm length: | 435 |
Alignm identity: | 313 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 50, 132 |
Conread position: | 414-836 |
Cow position: | chr3:64079502-64079925 (view UCSC Genome Browser custom track) |
Alignm length: | 434 |
Alignm identity: | 321 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 44, 89 |
Conread position: | 424-808 |
Cow position: | chr3:53245751-53246141 (view UCSC Genome Browser custom track) |
Alignm length: | 397 |
Alignm identity: | 280 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 39, 129 |
Conread position: | 427-862 |
Cow position: | chr3:44895612-44896043 (view UCSC Genome Browser custom track) |
Alignm length: | 448 |
Alignm identity: | 308 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 38, 122 |
Conread position: | 443-839 |
Cow position: | chr3:69187355-69186951 (view UCSC Genome Browser custom track) |
Alignm length: | 409 |
Alignm identity: | 276 |
Alignm E-value: | 2.94273e-44 |
Alignm gaps (pig, cow): | 17, 140 |
Conread position: | 444-862 |
Cow position: | chr3:76960712-76961142 (view UCSC Genome Browser custom track) |
Alignm length: | 441 |
Alignm identity: | 319 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 16, 153 |
Conread position: | 447-808 |
Cow position: | chr3:29552876-29553240 (view UCSC Genome Browser custom track) |
Alignm length: | 376 |
Alignm identity: | 264 |
Alignm E-value: | 2.94273e-44 |
Alignm gaps (pig, cow): | 13, 92 |
Conread position: | 460-634 |
Cow position: | chr3:62021658-62021831 (view UCSC Genome Browser custom track) |
Alignm length: | 178 |
Alignm identity: | 136 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 53, 80 |
Conread position: | 464-807 |
Cow position: | chr3:53193186-53192848 (view UCSC Genome Browser custom track) |
Alignm length: | 348 |
Alignm identity: | 235 |
Alignm E-value: | 1e-37 |
Alignm gaps (pig, cow): | 103, 19 |
Conread position: | 464-812 |
Cow position: | chr3:53132596-53132248 (view UCSC Genome Browser custom track) |
Alignm length: | 361 |
Alignm identity: | 263 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 164, 54 |
Conread position: | 466-833 |
Cow position: | chr3:1022309-1021949 (view UCSC Genome Browser custom track) |
Alignm length: | 375 |
Alignm identity: | 268 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 72, 82 |
Conread position: | 484-838 |
Cow position: | chr3:59608651-59608997 (view UCSC Genome Browser custom track) |
Alignm length: | 366 |
Alignm identity: | 259 |
Alignm E-value: | 2e-40 |
Alignm gaps (pig, cow): | 85, 26 |
Conread position: | 502-861 |
Cow position: | chr3:71500223-71500594 (view UCSC Genome Browser custom track) |
Alignm length: | 386 |
Alignm identity: | 279 |
Alignm E-value: | 2.8026e-45 |
Alignm gaps (pig, cow): | 67, 45 |
Conread position: | 509-828 |
Cow position: | chr3:1044122-1043785 (view UCSC Genome Browser custom track) |
Alignm length: | 338 |
Alignm identity: | 240 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 38, 0 |
Conread position: | 510-659 |
Cow position: | chr3:75990957-75990809 (view UCSC Genome Browser custom track) |
Alignm length: | 152 |
Alignm identity: | 113 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 59, 37 |
Conread position: | 542-808 |
Cow position: | chr3:55364779-55364504 (view UCSC Genome Browser custom track) |
Alignm length: | 279 |
Alignm identity: | 199 |
Alignm E-value: | 4e-36 |
Alignm gaps (pig, cow): | 27, 40 |
Conread position: | 573-862 |
Cow position: | chr3:54883931-54884212 (view UCSC Genome Browser custom track) |
Alignm length: | 302 |
Alignm identity: | 213 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 20, 25 |
Conread position: | 586-862 |
Cow position: | chr3:46287580-46287849 (view UCSC Genome Browser custom track) |
Alignm length: | 286 |
Alignm identity: | 206 |
Alignm E-value: | 2e-32 |
Alignm gaps (pig, cow): | 82, 48 |
Conread position: | 612-812 |
Cow position: | chr3:25774485-25774275 (view UCSC Genome Browser custom track) |
Alignm length: | 214 |
Alignm identity: | 152 |
Alignm E-value: | 8e-22 |
Alignm gaps (pig, cow): | 52, 5 |
Conread position: | 617-808 |
Cow position: | chr3:76189487-76189682 (view UCSC Genome Browser custom track) |
Alignm length: | 197 |
Alignm identity: | 155 |
Alignm E-value: | 5e-39 |
Alignm gaps (pig, cow): | 48, 70 |
Conread position: | 622-823 |
Cow position: | chr3:73055034-73055248 (view UCSC Genome Browser custom track) |
Alignm length: | 216 |
Alignm identity: | 159 |
Alignm E-value: | 5e-28 |
Alignm gaps (pig, cow): | 39, 182 |
Conread position: | 630-834 |
Cow position: | chr3:12618054-12618264 (view UCSC Genome Browser custom track) |
Alignm length: | 211 |
Alignm identity: | 153 |
Alignm E-value: | 6e-30 |
Alignm gaps (pig, cow): | 35, 0 |
Conread position: | 630-862 |
Cow position: | chr3:45634966-45634720 (view UCSC Genome Browser custom track) |
Alignm length: | 250 |
Alignm identity: | 178 |
Alignm E-value: | 5e-28 |
Alignm gaps (pig, cow): | 38, 150 |
Conread position: | 631-834 |
Cow position: | chr3:38335317-38335513 (view UCSC Genome Browser custom track) |
Alignm length: | 204 |
Alignm identity: | 150 |
Alignm E-value: | 7e-31 |
Alignm gaps (pig, cow): | 25, 0 |
Conread position: | 631-860 |
Cow position: | chr3:52154154-52153934 (view UCSC Genome Browser custom track) |
Alignm length: | 233 |
Alignm identity: | 165 |
Alignm E-value: | 4e-26 |
Alignm gaps (pig, cow): | 87, 21 |
Conread position: | 631-862 |
Cow position: | chr3:4485739-4485980 (view UCSC Genome Browser custom track) |
Alignm length: | 247 |
Alignm identity: | 178 |
Alignm E-value: | 5e-28 |
Alignm gaps (pig, cow): | 28, 100 |
Conread position: | 631-862 |
Cow position: | chr3:59811466-59811221 (view UCSC Genome Browser custom track) |
Alignm length: | 249 |
Alignm identity: | 182 |
Alignm E-value: | 7e-32 |
Alignm gaps (pig, cow): | 29, 224 |
Conread position: | 634-834 |
Cow position: | chr3:77778583-77778783 (view UCSC Genome Browser custom track) |
Alignm length: | 208 |
Alignm identity: | 156 |
Alignm E-value: | 5e-29 |
Alignm gaps (pig, cow): | 30, 85 |
Conread position: | 634-862 |
Cow position: | chr3:50593805-50593583 (view UCSC Genome Browser custom track) |
Alignm length: | 237 |
Alignm identity: | 170 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 5, 31 |
Conread position: | 634-862 |
Cow position: | chr3:73834479-73834248 (view UCSC Genome Browser custom track) |
Alignm length: | 238 |
Alignm identity: | 184 |
Alignm E-value: | 6e-40 |
Alignm gaps (pig, cow): | 34, 24 |
Conread position: | 635-861 |
Cow position: | chr3:5415396-5415162 (view UCSC Genome Browser custom track) |
Alignm length: | 239 |
Alignm identity: | 176 |
Alignm E-value: | 2e-32 |
Alignm gaps (pig, cow): | 29, 213 |
Conread position: | 636-808 |
Cow position: | chr3:43305355-43305535 (view UCSC Genome Browser custom track) |
Alignm length: | 181 |
Alignm identity: | 137 |
Alignm E-value: | 5e-29 |
Alignm gaps (pig, cow): | 30, 0 |
Conread position: | 641-808 |
Cow position: | chr3:47473363-47473536 (view UCSC Genome Browser custom track) |
Alignm length: | 174 |
Alignm identity: | 130 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 26, 0 |
Conread position: | 641-862 |
Cow position: | chr3:1416747-1416523 (view UCSC Genome Browser custom track) |
Alignm length: | 232 |
Alignm identity: | 174 |
Alignm E-value: | 2e-32 |
Alignm gaps (pig, cow): | 27, 105 |
Conread position: | 641-862 |
Cow position: | chr3:67655229-67655453 (view UCSC Genome Browser custom track) |
Alignm length: | 232 |
Alignm identity: | 167 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 27, 61 |
Conread position: | 644-831 |
Cow position: | chr3:65385505-65385696 (view UCSC Genome Browser custom track) |
Alignm length: | 193 |
Alignm identity: | 141 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 73, 41 |
Conread position: | 644-834 |
Cow position: | chr3:47623598-47623798 (view UCSC Genome Browser custom track) |
Alignm length: | 201 |
Alignm identity: | 146 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 24, 0 |
Conread position: | 644-834 |
Cow position: | chr3:59676116-59676307 (view UCSC Genome Browser custom track) |
Alignm length: | 195 |
Alignm identity: | 143 |
Alignm E-value: | 4e-27 |
Alignm gaps (pig, cow): | 74, 14 |
Conread position: | 650-853 |
Cow position: | chr3:39251152-39250946 (view UCSC Genome Browser custom track) |
Alignm length: | 211 |
Alignm identity: | 155 |
Alignm E-value: | 5e-29 |
Alignm gaps (pig, cow): | 18, 195 |
Conread position: | 661-863 |
Cow position: | chr3:65229838-65230031 (view UCSC Genome Browser custom track) |
Alignm length: | 204 |
Alignm identity: | 147 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 111, 13 |
Conread position: | 663-836 |
Cow position: | chr3:45845873-45845698 (view UCSC Genome Browser custom track) |
Alignm length: | 177 |
Alignm identity: | 136 |
Alignm E-value: | 7e-32 |
Alignm gaps (pig, cow): | 55, 23 |
Conread position: | 669-808 |
Cow position: | chr3:34588705-34588564 (view UCSC Genome Browser custom track) |
Alignm length: | 143 |
Alignm identity: | 109 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 58, 21 |
Conread position: | 674-833 |
Cow position: | chr3:60576332-60576492 (view UCSC Genome Browser custom track) |
Alignm length: | 161 |
Alignm identity: | 128 |
Alignm E-value: | 1e-34 |
Alignm gaps (pig, cow): | 99, 0 |
Conread position: | 676-862 |
Cow position: | chr3:80294384-80294567 (view UCSC Genome Browser custom track) |
Alignm length: | 191 |
Alignm identity: | 141 |
Alignm E-value: | 3e-25 |
Alignm gaps (pig, cow): | 41, 67 |
Conread position: | 685-836 |
Cow position: | chr3:26647668-26647522 (view UCSC Genome Browser custom track) |
Alignm length: | 152 |
Alignm identity: | 114 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 84, 0 |
Conread position: | 686-833 |
Cow position: | chr3:1015449-1015295 (view UCSC Genome Browser custom track) |
Alignm length: | 155 |
Alignm identity: | 117 |
Alignm E-value: | 8e-23 |
Alignm gaps (pig, cow): | 32, 0 |
Conread position: | 691-862 |
Cow position: | chr3:2173937-2174109 (view UCSC Genome Browser custom track) |
Alignm length: | 175 |
Alignm identity: | 133 |
Alignm E-value: | 5e-29 |
Alignm gaps (pig, cow): | 27, 150 |
Show alignments to all cow chromosomes.