Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8049J12.3
        

               Conread position:
               369-569
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               142
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               91, 172
               

               Conread position:
               369-625
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               181
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               91, 128
               

               Conread position:
               373-633
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               185
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               9, 105
               

               Conread position:
               373-634
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               191
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               5, 172
               

               Conread position:
               374-534
               

               Cow position:
               
               

               Alignm length:
               165
               

               Alignm identity:
               120
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               375-588
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               149
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               7, 171
               

               Conread position:
               377-534
               

               Cow position:
               
               

               Alignm length:
               161
               

               Alignm identity:
               121
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               83, 104
               

               Conread position:
               377-632
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               183
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               76, 36
               

               Conread position:
               379-622
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               172
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               79, 181
               

               Conread position:
               379-804
               

               Cow position:
               
               

               Alignm length:
               432
               

               Alignm identity:
               297
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 102
               

               Conread position:
               380-549
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               127
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               78, 67
               

               Conread position:
               380-606
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               80, 33
               

               Conread position:
               380-608
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               162
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               80, 33
               

               Conread position:
               380-631
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               177
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               83, 119
               

               Conread position:
               380-634
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               181
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               72, 174
               

               Conread position:
               380-808
               

               Cow position:
               
               

               Alignm length:
               447
               

               Alignm identity:
               316
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               80, 167
               

               Conread position:
               380-833
               

               Cow position:
               
               

               Alignm length:
               474
               

               Alignm identity:
               339
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               74, 95
               

               Conread position:
               380-864
               

               Cow position:
               
               

               Alignm length:
               500
               

               Alignm identity:
               358
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               85, 8
               

               Conread position:
               381-629
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               190
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               34, 172
               

               Conread position:
               381-657
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               208
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               44, 29
               

               Conread position:
               383-520
               

               Cow position:
               
               

               Alignm length:
               141
               

               Alignm identity:
               107
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               383-583
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               82, 30
               

               Conread position:
               383-634
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               187
               

               Alignm E-value:
               6.99949e-42
               

               Alignm gaps (pig, cow):
               77, 170
               

               Conread position:
               383-836
               

               Cow position:
               
               

               Alignm length:
               467
               

               Alignm identity:
               325
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               80, 22
               

               Conread position:
               383-861
               

               Cow position:
               
               

               Alignm length:
               501
               

               Alignm identity:
               341
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 82
               

               Conread position:
               384-567
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               131
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               158, 38
               

               Conread position:
               384-605
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               384-634
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               187
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               127, 109
               

               Conread position:
               384-640
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               178
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               77, 165
               

               Conread position:
               384-759
               

               Cow position:
               
               

               Alignm length:
               395
               

               Alignm identity:
               270
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               76, 38
               

               Conread position:
               384-813
               

               Cow position:
               
               

               Alignm length:
               457
               

               Alignm identity:
               319
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               77, 101
               

               Conread position:
               384-833
               

               Cow position:
               
               

               Alignm length:
               458
               

               Alignm identity:
               298
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               19, 30
               

               Conread position:
               384-834
               

               Cow position:
               
               

               Alignm length:
               457
               

               Alignm identity:
               335
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 81
               

               Conread position:
               384-862
               

               Cow position:
               
               

               Alignm length:
               495
               

               Alignm identity:
               337
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 182
               

               Conread position:
               387-632
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               181
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               62, 202
               

               Conread position:
               388-634
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               178
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               75, 152
               

               Conread position:
               389-633
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               185
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               72, 58
               

               Conread position:
               396-634
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               175
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               69, 144
               

               Conread position:
               399-839
               

               Cow position:
               
               

               Alignm length:
               448
               

               Alignm identity:
               308
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 97
               

               Conread position:
               413-836
               

               Cow position:
               
               

               Alignm length:
               435
               

               Alignm identity:
               313
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 132
               

               Conread position:
               414-836
               

               Cow position:
               
               

               Alignm length:
               434
               

               Alignm identity:
               321
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 89
               

               Conread position:
               424-808
               

               Cow position:
               
               

               Alignm length:
               397
               

               Alignm identity:
               280
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 129
               

               Conread position:
               427-862
               

               Cow position:
               
               

               Alignm length:
               448
               

               Alignm identity:
               308
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 122
               

               Conread position:
               443-839
               

               Cow position:
               
               

               Alignm length:
               409
               

               Alignm identity:
               276
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               17, 140
               

               Conread position:
               444-862
               

               Cow position:
               
               

               Alignm length:
               441
               

               Alignm identity:
               319
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 153
               

               Conread position:
               447-808
               

               Cow position:
               
               

               Alignm length:
               376
               

               Alignm identity:
               264
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               13, 92
               

               Conread position:
               460-634
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               53, 80
               

               Conread position:
               464-807
               

               Cow position:
               
               

               Alignm length:
               348
               

               Alignm identity:
               235
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               103, 19
               

               Conread position:
               464-812
               

               Cow position:
               
               

               Alignm length:
               361
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               164, 54
               

               Conread position:
               466-833
               

               Cow position:
               
               

               Alignm length:
               375
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 82
               

               Conread position:
               484-838
               

               Cow position:
               
               

               Alignm length:
               366
               

               Alignm identity:
               259
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               85, 26
               

               Conread position:
               502-861
               

               Cow position:
               
               

               Alignm length:
               386
               

               Alignm identity:
               279
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               67, 45
               

               Conread position:
               509-828
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               240
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               510-659
               

               Cow position:
               
               

               Alignm length:
               152
               

               Alignm identity:
               113
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               59, 37
               

               Conread position:
               542-808
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               199
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               27, 40
               

               Conread position:
               573-862
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               213
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               20, 25
               

               Conread position:
               586-862
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               206
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               82, 48
               

               Conread position:
               612-812
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               152
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               52, 5
               

               Conread position:
               617-808
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               155
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               48, 70
               

               Conread position:
               622-823
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               159
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               39, 182
               

               Conread position:
               630-834
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               153
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               630-862
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               178
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               38, 150
               

               Conread position:
               631-834
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               150
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               631-860
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               165
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               87, 21
               

               Conread position:
               631-862
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               178
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               28, 100
               

               Conread position:
               631-862
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               182
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               29, 224
               

               Conread position:
               634-834
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               156
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               30, 85
               

               Conread position:
               634-862
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               170
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               5, 31
               

               Conread position:
               634-862
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               184
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               34, 24
               

               Conread position:
               635-861
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               176
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               29, 213
               

               Conread position:
               636-808
               

               Cow position:
               
               

               Alignm length:
               181
               

               Alignm identity:
               137
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               641-808
               

               Cow position:
               
               

               Alignm length:
               174
               

               Alignm identity:
               130
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               641-862
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               174
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               27, 105
               

               Conread position:
               641-862
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               167
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               27, 61
               

               Conread position:
               644-831
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               73, 41
               

               Conread position:
               644-834
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               146
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               644-834
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               143
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               74, 14
               

               Conread position:
               650-853
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               155
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               18, 195
               

               Conread position:
               661-863
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               147
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               111, 13
               

               Conread position:
               663-836
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               136
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               55, 23
               

               Conread position:
               669-808
               

               Cow position:
               
               

               Alignm length:
               143
               

               Alignm identity:
               109
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               58, 21
               

               Conread position:
               674-833
               

               Cow position:
               
               

               Alignm length:
               161
               

               Alignm identity:
               128
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               99, 0
               

               Conread position:
               676-862
               

               Cow position:
               
               

               Alignm length:
               191
               

               Alignm identity:
               141
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               41, 67
               

               Conread position:
               685-836
               

               Cow position:
               
               

               Alignm length:
               152
               

               Alignm identity:
               114
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               686-833
               

               Cow position:
               
               

               Alignm length:
               155
               

               Alignm identity:
               117
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               691-862
               

               Cow position:
               
               

               Alignm length:
               175
               

               Alignm identity:
               133
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               27, 150
               
Show alignments to all cow chromosomes.