Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8049J12.3
        

               Conread position:
               373-634
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               192
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               90, 54
               

               Conread position:
               377-634
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               187
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               86, 125
               

               Conread position:
               377-806
               

               Cow position:
               
               

               Alignm length:
               451
               

               Alignm identity:
               318
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 113
               

               Conread position:
               377-834
               

               Cow position:
               
               

               Alignm length:
               467
               

               Alignm identity:
               319
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               26, 67
               

               Conread position:
               378-839
               

               Cow position:
               
               

               Alignm length:
               478
               

               Alignm identity:
               339
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 75
               

               Conread position:
               379-617
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               84, 171
               

               Conread position:
               380-545
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               80, 151
               

               Conread position:
               380-621
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               168
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               183, 117
               

               Conread position:
               380-634
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               183
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               40, 121
               

               Conread position:
               380-752
               

               Cow position:
               
               

               Alignm length:
               383
               

               Alignm identity:
               281
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 122
               

               Conread position:
               381-555
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               128
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               79, 171
               

               Conread position:
               383-569
               

               Cow position:
               
               

               Alignm length:
               190
               

               Alignm identity:
               133
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               78, 167
               

               Conread position:
               383-629
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               189
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               80, 107
               

               Conread position:
               383-633
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               180
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               85, 113
               

               Conread position:
               383-633
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               182
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               77, 161
               

               Conread position:
               383-634
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               184
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               19, 122
               

               Conread position:
               383-634
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               173
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               80, 162
               

               Conread position:
               383-634
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               176
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               86, 157
               

               Conread position:
               383-781
               

               Cow position:
               
               

               Alignm length:
               409
               

               Alignm identity:
               278
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               71, 38
               

               Conread position:
               383-836
               

               Cow position:
               
               

               Alignm length:
               471
               

               Alignm identity:
               326
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 155
               

               Conread position:
               383-862
               

               Cow position:
               
               

               Alignm length:
               499
               

               Alignm identity:
               351
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               80, 53
               

               Conread position:
               383-862
               

               Cow position:
               
               

               Alignm length:
               498
               

               Alignm identity:
               380
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               84, 8
               

               Conread position:
               384-567
               

               Cow position:
               
               

               Alignm length:
               186
               

               Alignm identity:
               136
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               75, 125
               

               Conread position:
               384-591
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               162
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               76, 96
               

               Conread position:
               384-624
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               162
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               76, 156
               

               Conread position:
               384-634
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               185
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               76, 63
               

               Conread position:
               384-770
               

               Cow position:
               
               

               Alignm length:
               394
               

               Alignm identity:
               273
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               81, 130
               

               Conread position:
               384-862
               

               Cow position:
               
               

               Alignm length:
               492
               

               Alignm identity:
               338
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 34
               

               Conread position:
               384-862
               

               Cow position:
               
               

               Alignm length:
               487
               

               Alignm identity:
               331
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               76, 172
               

               Conread position:
               385-807
               

               Cow position:
               
               

               Alignm length:
               432
               

               Alignm identity:
               307
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 160
               

               Conread position:
               388-608
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               167
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               72, 152
               

               Conread position:
               389-634
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               182
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               76, 45
               

               Conread position:
               400-659
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               184
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               37, 56
               

               Conread position:
               408-812
               

               Cow position:
               
               

               Alignm length:
               419
               

               Alignm identity:
               297
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 142
               

               Conread position:
               413-849
               

               Cow position:
               
               

               Alignm length:
               449
               

               Alignm identity:
               328
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 19
               

               Conread position:
               422-862
               

               Cow position:
               
               

               Alignm length:
               454
               

               Alignm identity:
               312
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 132
               

               Conread position:
               423-824
               

               Cow position:
               
               

               Alignm length:
               424
               

               Alignm identity:
               298
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 168
               

               Conread position:
               428-862
               

               Cow position:
               
               

               Alignm length:
               451
               

               Alignm identity:
               328
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 121
               

               Conread position:
               440-836
               

               Cow position:
               
               

               Alignm length:
               419
               

               Alignm identity:
               305
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 111
               

               Conread position:
               441-836
               

               Cow position:
               
               

               Alignm length:
               405
               

               Alignm identity:
               277
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               24, 90
               

               Conread position:
               442-607
               

               Cow position:
               
               

               Alignm length:
               173
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               21, 103
               

               Conread position:
               442-683
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               189
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               22, 102
               

               Conread position:
               443-808
               

               Cow position:
               
               

               Alignm length:
               383
               

               Alignm identity:
               261
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               15, 106
               

               Conread position:
               444-632
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               139
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               14, 142
               

               Conread position:
               444-815
               

               Cow position:
               
               

               Alignm length:
               391
               

               Alignm identity:
               270
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               21, 38
               

               Conread position:
               444-862
               

               Cow position:
               
               

               Alignm length:
               429
               

               Alignm identity:
               299
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 100
               

               Conread position:
               446-634
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               137
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               106, 54
               

               Conread position:
               458-862
               

               Cow position:
               
               

               Alignm length:
               421
               

               Alignm identity:
               274
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               73, 81
               

               Conread position:
               464-617
               

               Cow position:
               
               

               Alignm length:
               156
               

               Alignm identity:
               118
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               114, 70
               

               Conread position:
               482-634
               

               Cow position:
               
               

               Alignm length:
               154
               

               Alignm identity:
               117
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               87, 47
               

               Conread position:
               510-862
               

               Cow position:
               
               

               Alignm length:
               363
               

               Alignm identity:
               248
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               82, 42
               

               Conread position:
               539-816
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               215
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               30, 15
               

               Conread position:
               543-851
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               235
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 92
               

               Conread position:
               543-861
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               223
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               27, 9
               

               Conread position:
               549-842
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               219
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               24, 33
               

               Conread position:
               550-839
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               232
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               24, 31
               

               Conread position:
               564-771
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               71, 18
               

               Conread position:
               578-864
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               215
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               86, 136
               

               Conread position:
               579-833
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               200
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               603-808
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               72, 37
               

               Conread position:
               631-802
               

               Cow position:
               
               

               Alignm length:
               173
               

               Alignm identity:
               127
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               142, 30
               

               Conread position:
               631-808
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               34, 123
               

               Conread position:
               631-833
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               158
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               37, 21
               

               Conread position:
               631-833
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               156
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               29, 129
               

               Conread position:
               631-862
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               178
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               34, 167
               

               Conread position:
               635-796
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               636-862
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               176
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               31, 207
               

               Conread position:
               639-861
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               168
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               52, 209
               

               Conread position:
               641-833
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               156
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               27, 82
               

               Conread position:
               641-833
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               89, 27
               

               Conread position:
               641-860
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               26, 68
               

               Conread position:
               644-808
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               122
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               127, 30
               

               Conread position:
               644-833
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               149
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               24, 101
               

               Conread position:
               645-823
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               129
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               73, 14
               

               Conread position:
               648-864
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               159
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               69, 26
               

               Conread position:
               673-833
               

               Cow position:
               
               

               Alignm length:
               162
               

               Alignm identity:
               115
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               98, 0
               

               Conread position:
               674-806
               

               Cow position:
               
               

               Alignm length:
               135
               

               Alignm identity:
               106
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               99, 39
               

               Conread position:
               674-829
               

               Cow position:
               
               

               Alignm length:
               159
               

               Alignm identity:
               122
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               57, 23
               
Show alignments to all cow chromosomes.