Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8049J12.3
        

               Conread position:
               358-862
               

               Cow position:
               
               

               Alignm length:
               519
               

               Alignm identity:
               365
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 58
               

               Conread position:
               369-821
               

               Cow position:
               
               

               Alignm length:
               480
               

               Alignm identity:
               341
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               180, 14
               

               Conread position:
               370-634
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               192
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               84, 11
               

               Conread position:
               372-614
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               172
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               14, 170
               

               Conread position:
               372-634
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               190
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               7, 103
               

               Conread position:
               372-832
               

               Cow position:
               
               

               Alignm length:
               476
               

               Alignm identity:
               316
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               54, 90
               

               Conread position:
               373-529
               

               Cow position:
               
               

               Alignm length:
               161
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               374-771
               

               Cow position:
               
               

               Alignm length:
               411
               

               Alignm identity:
               297
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 140
               

               Conread position:
               376-632
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               179
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               193, 93
               

               Conread position:
               376-659
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               205
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               5, 156
               

               Conread position:
               377-608
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               88, 176
               

               Conread position:
               380-546
               

               Cow position:
               
               

               Alignm length:
               168
               

               Alignm identity:
               127
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               85, 0
               

               Conread position:
               380-579
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               149
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               82, 159
               

               Conread position:
               380-634
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               195
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               78, 64
               

               Conread position:
               380-634
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               184
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               189, 82
               

               Conread position:
               380-700
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               234
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               70, 10
               

               Conread position:
               380-817
               

               Cow position:
               
               

               Alignm length:
               447
               

               Alignm identity:
               311
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 166
               

               Conread position:
               380-833
               

               Cow position:
               
               

               Alignm length:
               472
               

               Alignm identity:
               345
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               80, 41
               

               Conread position:
               383-534
               

               Cow position:
               
               

               Alignm length:
               155
               

               Alignm identity:
               118
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               81, 13
               

               Conread position:
               383-598
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               49, 81
               

               Conread position:
               383-605
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               159
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               80, 7
               

               Conread position:
               383-607
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               184, 74
               

               Conread position:
               383-612
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               163
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               77, 30
               

               Conread position:
               383-630
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               170
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               69, 173
               

               Conread position:
               383-634
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               178
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               87, 125
               

               Conread position:
               383-634
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               182
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               32, 20
               

               Conread position:
               383-634
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               80, 44
               

               Conread position:
               383-836
               

               Cow position:
               
               

               Alignm length:
               475
               

               Alignm identity:
               322
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 18
               

               Conread position:
               383-864
               

               Cow position:
               
               

               Alignm length:
               499
               

               Alignm identity:
               336
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 7
               

               Conread position:
               384-545
               

               Cow position:
               
               

               Alignm length:
               165
               

               Alignm identity:
               119
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               40, 128
               

               Conread position:
               384-592
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               150
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               76, 109
               

               Conread position:
               384-632
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               181
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               49, 135
               

               Conread position:
               384-751
               

               Cow position:
               
               

               Alignm length:
               387
               

               Alignm identity:
               265
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               149, 141
               

               Conread position:
               384-864
               

               Cow position:
               
               

               Alignm length:
               509
               

               Alignm identity:
               369
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 51
               

               Conread position:
               386-752
               

               Cow position:
               
               

               Alignm length:
               383
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               74, 106
               

               Conread position:
               391-628
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               171
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               72, 154
               

               Conread position:
               393-836
               

               Cow position:
               
               

               Alignm length:
               456
               

               Alignm identity:
               319
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               75, 157
               

               Conread position:
               396-832
               

               Cow position:
               
               

               Alignm length:
               458
               

               Alignm identity:
               327
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 22
               

               Conread position:
               398-615
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               62, 155
               

               Conread position:
               399-822
               

               Cow position:
               
               

               Alignm length:
               430
               

               Alignm identity:
               296
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 128
               

               Conread position:
               400-808
               

               Cow position:
               
               

               Alignm length:
               421
               

               Alignm identity:
               309
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 139
               

               Conread position:
               413-584
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               134
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               47, 132
               

               Conread position:
               413-707
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               212
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               52, 137
               

               Conread position:
               423-798
               

               Cow position:
               
               

               Alignm length:
               392
               

               Alignm identity:
               289
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 135
               

               Conread position:
               426-634
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               157
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               34, 88
               

               Conread position:
               426-709
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               202
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               43, 154
               

               Conread position:
               428-632
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               160
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               32, 167
               

               Conread position:
               435-862
               

               Cow position:
               
               

               Alignm length:
               454
               

               Alignm identity:
               325
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 107
               

               Conread position:
               442-634
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               137
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               447-756
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               238
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               127, 29
               

               Conread position:
               447-862
               

               Cow position:
               
               

               Alignm length:
               439
               

               Alignm identity:
               315
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 55
               

               Conread position:
               449-834
               

               Cow position:
               
               

               Alignm length:
               398
               

               Alignm identity:
               255
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               18, 96
               

               Conread position:
               481-833
               

               Cow position:
               
               

               Alignm length:
               372
               

               Alignm identity:
               283
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               89, 61
               

               Conread position:
               494-816
               

               Cow position:
               
               

               Alignm length:
               333
               

               Alignm identity:
               230
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               78, 48
               

               Conread position:
               505-864
               

               Cow position:
               
               

               Alignm length:
               367
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               163, 33
               

               Conread position:
               509-860
               

               Cow position:
               
               

               Alignm length:
               357
               

               Alignm identity:
               249
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               60, 44
               

               Conread position:
               516-862
               

               Cow position:
               
               

               Alignm length:
               354
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 31
               

               Conread position:
               542-862
               

               Cow position:
               
               

               Alignm length:
               332
               

               Alignm identity:
               236
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               31, 10
               

               Conread position:
               560-713
               

               Cow position:
               
               

               Alignm length:
               155
               

               Alignm identity:
               115
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               20, 118
               

               Conread position:
               579-833
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               189
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               58, 18
               

               Conread position:
               581-836
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               182
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               136, 79
               

               Conread position:
               631-833
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               42, 143
               

               Conread position:
               631-834
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               160
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               37, 71
               

               Conread position:
               631-860
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               178
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               30, 130
               

               Conread position:
               631-862
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               178
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               30, 222
               

               Conread position:
               640-862
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               35, 22
               

               Conread position:
               641-856
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               168
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               27, 120
               

               Conread position:
               641-862
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               171
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               35, 46
               

               Conread position:
               641-862
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               27, 20
               

               Conread position:
               644-836
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               140
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               22, 14
               

               Conread position:
               645-863
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               169
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               23, 55
               

               Conread position:
               653-860
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               155
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               64, 196
               

               Conread position:
               661-864
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               155
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               7, 129
               

               Conread position:
               662-834
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               113, 6
               

               Conread position:
               663-848
               

               Cow position:
               
               

               Alignm length:
               187
               

               Alignm identity:
               137
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               109, 163
               

               Conread position:
               665-833
               

               Cow position:
               
               

               Alignm length:
               173
               

               Alignm identity:
               138
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               17, 51
               

               Conread position:
               665-854
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               142
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               11, 53
               

               Conread position:
               666-836
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               685-839
               

               Cow position:
               
               

               Alignm length:
               165
               

               Alignm identity:
               126
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               685-862
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               137
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               36, 155
               
Show alignments to all cow chromosomes.