Cow genome map

Conread name: Ss1.1-Pig4-TMW8049M02.5

Conread position: 37-536
Cow position: chr11:41427143-41426660 (view UCSC Genome Browser custom track)
Alignm length: 511
Alignm identity: 327
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 170, 96

Conread position: 37-550
Cow position: chr11:26066943-26067445 (view UCSC Genome Browser custom track)
Alignm length: 523
Alignm identity: 323
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 15, 45

Conread position: 38-536
Cow position: chr11:5329031-5328541 (view UCSC Genome Browser custom track)
Alignm length: 510
Alignm identity: 325
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 38, 8

Conread position: 39-550
Cow position: chr11:36182937-36182423 (view UCSC Genome Browser custom track)
Alignm length: 527
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 105

Conread position: 42-378
Cow position: chr11:63998851-63999184 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 225
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 117, 30

Conread position: 42-535
Cow position: chr11:77750519-77751020 (view UCSC Genome Browser custom track)
Alignm length: 513
Alignm identity: 326
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 8, 59

Conread position: 45-387
Cow position: chr11:79018814-79019163 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 230
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 20, 46

Conread position: 45-495
Cow position: chr11:27765386-27764939 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 282
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 7, 35

Conread position: 46-552
Cow position: chr11:3283246-3282791 (view UCSC Genome Browser custom track)
Alignm length: 507
Alignm identity: 336
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 19, 0

Conread position: 47-451
Cow position: chr11:16906822-16907214 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 275
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 30, 73

Conread position: 47-487
Cow position: chr11:27932507-27932061 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 288
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 208, 25

Conread position: 47-566
Cow position: chr11:52380637-52381151 (view UCSC Genome Browser custom track)
Alignm length: 527
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 94

Conread position: 48-548
Cow position: chr11:28644329-28643818 (view UCSC Genome Browser custom track)
Alignm length: 519
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 42

Conread position: 48-550
Cow position: chr11:33340912-33341411 (view UCSC Genome Browser custom track)
Alignm length: 513
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 65

Conread position: 48-551
Cow position: chr11:59702717-59702218 (view UCSC Genome Browser custom track)
Alignm length: 518
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 177, 14

Conread position: 49-550
Cow position: chr11:42835720-42836228 (view UCSC Genome Browser custom track)
Alignm length: 518
Alignm identity: 333
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 32, 37

Conread position: 53-551
Cow position: chr11:1624983-1625481 (view UCSC Genome Browser custom track)
Alignm length: 514
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 92

Conread position: 54-383
Cow position: chr11:22747109-22747431 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 225
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 51, 18

Conread position: 54-484
Cow position: chr11:27913513-27913073 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 278
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 114, 57

Conread position: 54-549
Cow position: chr11:19788355-19787881 (view UCSC Genome Browser custom track)
Alignm length: 505
Alignm identity: 326
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 22, 45

Conread position: 55-365
Cow position: chr11:63866437-63866736 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 207
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 108, 24

Conread position: 55-437
Cow position: chr11:40395659-40395282 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 246
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 245, 29

Conread position: 55-537
Cow position: chr11:33311210-33310716 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 328
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 22, 80

Conread position: 56-345
Cow position: chr11:1932261-1932555 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 190
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 49, 86

Conread position: 63-517
Cow position: chr11:5961525-5961078 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 291
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 42, 27

Conread position: 66-322
Cow position: chr11:47883012-47882765 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 168
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 67, 0

Conread position: 66-405
Cow position: chr11:83032896-83032558 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 218
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 28, 78

Conread position: 66-461
Cow position: chr11:26845380-26845762 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 68

Conread position: 66-534
Cow position: chr11:70745310-70745790 (view UCSC Genome Browser custom track)
Alignm length: 494
Alignm identity: 313
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 81, 67

Conread position: 66-550
Cow position: chr11:23137838-23138326 (view UCSC Genome Browser custom track)
Alignm length: 501
Alignm identity: 329
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 123, 32

Conread position: 66-552
Cow position: chr11:69119508-69119032 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 263, 68

Conread position: 66-552
Cow position: chr11:71456022-71455520 (view UCSC Genome Browser custom track)
Alignm length: 510
Alignm identity: 331
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 14, 138

Conread position: 67-535
Cow position: chr11:35153610-35154080 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 30

Conread position: 67-549
Cow position: chr11:55334106-55333644 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 51

Conread position: 68-365
Cow position: chr11:17676163-17676452 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 195
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 15, 0

Conread position: 68-549
Cow position: chr11:61454317-61454799 (view UCSC Genome Browser custom track)
Alignm length: 505
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 256, 56

Conread position: 68-550
Cow position: chr11:43430251-43430712 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 13

Conread position: 68-552
Cow position: chr11:62226196-62225732 (view UCSC Genome Browser custom track)
Alignm length: 492
Alignm identity: 322
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 15, 66

Conread position: 68-552
Cow position: chr11:83230184-83230652 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 65

Conread position: 71-389
Cow position: chr11:261045-261367 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 217
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 34, 272

Conread position: 72-432
Cow position: chr11:32254004-32254371 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 235
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 23, 12

Conread position: 72-539
Cow position: chr11:72871106-72870669 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 307
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 135, 28

Conread position: 72-552
Cow position: chr11:952468-952001 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 257, 36

Conread position: 73-432
Cow position: chr11:69076114-69075756 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 252
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 259, 60

Conread position: 73-469
Cow position: chr11:34646803-34646402 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 17

Conread position: 73-514
Cow position: chr11:65762373-65762829 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 43

Conread position: 73-549
Cow position: chr11:27747131-27746653 (view UCSC Genome Browser custom track)
Alignm length: 490
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 72

Conread position: 74-516
Cow position: chr11:25620183-25620629 (view UCSC Genome Browser custom track)
Alignm length: 456
Alignm identity: 294
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 89, 26

Conread position: 75-461
Cow position: chr11:7874344-7873966 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 253
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 115, 11

Conread position: 75-476
Cow position: chr11:2874612-2874192 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 274
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 10, 69

Conread position: 75-517
Cow position: chr11:62620580-62620150 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 12

Conread position: 75-521
Cow position: chr11:27404868-27405307 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 30

Conread position: 75-550
Cow position: chr11:42016431-42016904 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 314
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 16, 49

Conread position: 77-426
Cow position: chr11:23407664-23407315 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 234
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 28, 13

Conread position: 78-419
Cow position: chr11:69978172-69977838 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 237
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 39, 29

Conread position: 78-460
Cow position: chr11:26143894-26144279 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 245
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 19, 65

Conread position: 78-535
Cow position: chr11:41373-40929 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 169, 13

Conread position: 79-482
Cow position: chr11:41215937-41215544 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 267
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 26, 58

Conread position: 79-550
Cow position: chr11:5418055-5418529 (view UCSC Genome Browser custom track)
Alignm length: 486
Alignm identity: 306
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 30, 64

Conread position: 79-552
Cow position: chr11:73924357-73924826 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 19

Conread position: 81-484
Cow position: chr11:19591793-19592199 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 279
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 25, 53

Conread position: 81-485
Cow position: chr11:65058410-65058817 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 261
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 24, 61

Conread position: 82-351
Cow position: chr11:10363176-10363456 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 196
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 64, 51

Conread position: 82-484
Cow position: chr11:72375494-72375890 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 268
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 257, 51

Conread position: 82-528
Cow position: chr11:50073127-50072716 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 294
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 298, 49

Conread position: 82-550
Cow position: chr11:58990683-58990245 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 328, 51

Conread position: 87-535
Cow position: chr11:17227454-17227892 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 306
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 16, 49

Conread position: 87-536
Cow position: chr11:7924398-7924843 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 309
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 43, 36

Conread position: 87-536
Cow position: chr11:13500205-13499761 (view UCSC Genome Browser custom track)
Alignm length: 459
Alignm identity: 298
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 246, 39

Conread position: 87-536
Cow position: chr11:30476190-30475745 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 287
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 169, 78

Conread position: 87-556
Cow position: chr11:44223079-44222628 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 39

Conread position: 89-325
Cow position: chr11:21886023-21885792 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 162
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 70, 42

Conread position: 90-497
Cow position: chr11:15772520-15772937 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 274
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 15, 52

Conread position: 90-548
Cow position: chr11:42291648-42292099 (view UCSC Genome Browser custom track)
Alignm length: 467
Alignm identity: 305
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 96, 51

Conread position: 90-568
Cow position: chr11:6399871-6400359 (view UCSC Genome Browser custom track)
Alignm length: 494
Alignm identity: 318
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 10, 52

Conread position: 91-342
Cow position: chr11:46922696-46922947 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 172
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 119, 50

Conread position: 91-435
Cow position: chr11:35212978-35213316 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 230
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 13, 48

Conread position: 91-537
Cow position: chr11:66188131-66188576 (view UCSC Genome Browser custom track)
Alignm length: 459
Alignm identity: 303
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 171, 20

Conread position: 91-549
Cow position: chr11:30165704-30165246 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 310
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 15, 52

Conread position: 91-550
Cow position: chr11:35347557-35348023 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 313
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 8, 53

Conread position: 91-550
Cow position: chr11:70483658-70484127 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 314
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 18, 71

Conread position: 94-533
Cow position: chr11:64905189-64904745 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 280
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 71, 43

Conread position: 94-550
Cow position: chr11:53773872-53773407 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 308
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 11, 48

Conread position: 94-552
Cow position: chr11:44032194-44031732 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 41

Conread position: 95-510
Cow position: chr11:5486204-5485782 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 273
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 10, 76

Conread position: 97-508
Cow position: chr11:64044415-64044013 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 10

Conread position: 97-526
Cow position: chr11:2917408-2917823 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 44

Conread position: 97-536
Cow position: chr11:30708691-30708249 (view UCSC Genome Browser custom track)
Alignm length: 456
Alignm identity: 296
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 8, 45

Conread position: 100-475
Cow position: chr11:47638842-47639223 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 241
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 59, 42

Conread position: 100-538
Cow position: chr11:26535966-26535519 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 302
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 112, 35

Conread position: 100-545
Cow position: chr11:65157223-65157670 (view UCSC Genome Browser custom track)
Alignm length: 459
Alignm identity: 303
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 59, 42

Conread position: 100-552
Cow position: chr11:74316888-74316439 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 41

Conread position: 101-389
Cow position: chr11:40608412-40608701 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 196
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 74, 40

Conread position: 108-432
Cow position: chr11:18852077-18851766 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 224
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 272, 33

Conread position: 110-364
Cow position: chr11:17721629-17721885 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 176
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 49, 31

Conread position: 110-534
Cow position: chr11:20238848-20238421 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 225, 31

Conread position: 110-537
Cow position: chr11:80564469-80564050 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 86

Conread position: 110-550
Cow position: chr11:11533763-11534167 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 305
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 31, 69

Conread position: 110-550
Cow position: chr11:19487307-19487741 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 284
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 78, 31

Conread position: 110-553
Cow position: chr11:77758589-77759028 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 294
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 80, 35

Conread position: 110-567
Cow position: chr11:68909681-68910129 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 307
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 49, 27

Conread position: 113-550
Cow position: chr11:4674275-4674716 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 293
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 50, 28

Conread position: 121-550
Cow position: chr11:56518152-56518578 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 37

Conread position: 122-535
Cow position: chr11:63848002-63847597 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 11

Conread position: 123-378
Cow position: chr11:83033079-83033331 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 174
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 22, 10

Conread position: 126-493
Cow position: chr11:36238930-36238571 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 254, 17

Conread position: 133-325
Cow position: chr11:56290659-56290470 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 133
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 12, 0

Conread position: 136-536
Cow position: chr11:30879809-30879426 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 270
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 275, 44

Conread position: 136-550
Cow position: chr11:34963215-34962797 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 284
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 49, 7

Conread position: 137-527
Cow position: chr11:2092472-2092095 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 195, 50

Conread position: 138-437
Cow position: chr11:39499500-39499201 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 214
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 21, 46

Conread position: 138-549
Cow position: chr11:46747714-46748133 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 86

Conread position: 138-550
Cow position: chr11:71868458-71868869 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 275
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 85, 27

Conread position: 145-362
Cow position: chr11:70826085-70825872 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 147
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 62, 47

Conread position: 145-453
Cow position: chr11:38577640-38577948 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 207
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 235, 115

Conread position: 145-484
Cow position: chr11:61958606-61958951 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 231
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 205, 71

Conread position: 145-522
Cow position: chr11:36658688-36659052 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 262
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 201, 21

Conread position: 145-526
Cow position: chr11:36849056-36848688 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 260
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 38, 73

Conread position: 145-530
Cow position: chr11:40478715-40479124 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 270
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 234, 26

Conread position: 145-550
Cow position: chr11:21497662-21497275 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 251
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 88, 185

Conread position: 145-550
Cow position: chr11:39115634-39115228 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 30

Conread position: 145-552
Cow position: chr11:25387204-25386803 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 42

Conread position: 145-552
Cow position: chr11:44575616-44576004 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 174, 42

Conread position: 145-570
Cow position: chr11:34032060-34032482 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 294
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 60, 86

Conread position: 146-406
Cow position: chr11:41293680-41293945 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 185
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 14, 43

Conread position: 146-466
Cow position: chr11:70277975-70278296 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 209
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 8, 48

Conread position: 146-467
Cow position: chr11:15373979-15373664 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 220
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 39, 73

Conread position: 146-481
Cow position: chr11:66424744-66425086 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 241
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 186, 41

Conread position: 146-537
Cow position: chr11:77128798-77128414 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 269
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 182, 259

Conread position: 146-550
Cow position: chr11:29946778-29947192 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 277
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 181, 21

Conread position: 147-457
Cow position: chr11:71500998-71501312 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 206
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 238, 27

Conread position: 149-349
Cow position: chr11:19606711-19606512 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 134
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 43, 0

Conread position: 149-537
Cow position: chr11:17831090-17831482 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 197, 37

Conread position: 150-493
Cow position: chr11:36286832-36286488 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 226
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 30, 190

Conread position: 150-494
Cow position: chr11:4207440-4207101 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 232
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 212, 35

Conread position: 150-504
Cow position: chr11:34144795-34145138 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 242
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 182, 19

Conread position: 150-537
Cow position: chr11:40792569-40792948 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 253
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 40, 69

Conread position: 150-550
Cow position: chr11:48474835-48474443 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 230, 37

Conread position: 151-550
Cow position: chr11:18371308-18371705 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 264
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 48, 66

Conread position: 151-559
Cow position: chr11:17321781-17321381 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 32

Conread position: 152-297
Cow position: chr11:70741274-70741129 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 108
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 33, 58

Conread position: 152-350
Cow position: chr11:29699569-29699768 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 139
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 180, 35

Conread position: 152-455
Cow position: chr11:63909537-63909833 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 203
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 233, 41

Conread position: 152-535
Cow position: chr11:73512316-73512672 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 270
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 81, 18

Conread position: 152-539
Cow position: chr11:1849043-1849422 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 73

Conread position: 153-340
Cow position: chr11:82730869-82731054 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 128
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 34, 0

Conread position: 153-496
Cow position: chr11:70114601-70114259 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 244
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 53, 34

Conread position: 153-552
Cow position: chr11:20761971-20761578 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 34

Conread position: 155-419
Cow position: chr11:47772260-47772531 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 193
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 13, 44

Conread position: 155-550
Cow position: chr11:21894032-21894419 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 269
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 34, 72

Conread position: 157-515
Cow position: chr11:42043872-42044223 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 248
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 172, 34

Conread position: 157-550
Cow position: chr11:48272325-48271929 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 180, 29

Conread position: 158-463
Cow position: chr11:30955124-30954815 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 180, 35

Conread position: 159-376
Cow position: chr11:8437570-8437782 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 152
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 28, 0

Conread position: 159-426
Cow position: chr11:5201528-5201789 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 182
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 247, 44

Conread position: 161-550
Cow position: chr11:62150773-62151147 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 176, 26

Conread position: 162-537
Cow position: chr11:33753788-33754154 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 257
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 30, 72

Conread position: 162-552
Cow position: chr11:54334448-54334067 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 269
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 217, 53

Conread position: 163-442
Cow position: chr11:11647204-11646907 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 212
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 60, 24

Conread position: 163-453
Cow position: chr11:8544899-8545186 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 194
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 183, 52

Conread position: 163-470
Cow position: chr11:66572375-66572691 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 208
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 20, 111

Conread position: 163-474
Cow position: chr11:13592856-13592542 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 213
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 70, 60

Conread position: 163-536
Cow position: chr11:75178015-75177634 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 248
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 17, 38

Conread position: 163-536
Cow position: chr11:84385520-84385898 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 265
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 36, 56

Conread position: 163-552
Cow position: chr11:70609917-70609520 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 269
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 115, 29

Conread position: 164-537
Cow position: chr11:46746756-46746380 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 262
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 48, 28

Conread position: 165-447
Cow position: chr11:80556335-80556053 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 209
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 174, 18

Conread position: 165-515
Cow position: chr11:32436455-32436096 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 243
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 20, 72

Conread position: 165-536
Cow position: chr11:35684383-35684751 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 213, 27

Conread position: 165-550
Cow position: chr11:10095460-10095077 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 262
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 221, 22

Conread position: 165-552
Cow position: chr11:15285500-15285885 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 179, 18

Conread position: 165-552
Cow position: chr11:18243828-18244209 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 35

Conread position: 165-552
Cow position: chr11:27248605-27248225 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 166, 18

Conread position: 165-552
Cow position: chr11:30192296-30191902 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 27

Conread position: 165-558
Cow position: chr11:40459225-40458846 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 262
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 42, 22

Conread position: 165-577
Cow position: chr11:1485743-1486161 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 286
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 34, 16

Conread position: 168-365
Cow position: chr11:35803254-35803052 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 151
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 30, 101

Conread position: 168-536
Cow position: chr11:66896687-66897057 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 244
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 39, 18

Conread position: 169-389
Cow position: chr11:28168310-28168529 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 155
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 167, 23

Conread position: 169-453
Cow position: chr11:76890162-76889875 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 193
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 20, 69

Conread position: 169-484
Cow position: chr11:71492747-71493062 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 230
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 193, 106

Conread position: 169-525
Cow position: chr11:82940511-82940860 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 253
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 10, 19

Conread position: 169-526
Cow position: chr11:30638837-30639192 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 238
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 241, 18

Conread position: 169-536
Cow position: chr11:36112531-36112166 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 254
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 195, 22

Conread position: 169-543
Cow position: chr11:3234188-3233821 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 251
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 241, 18

Conread position: 169-544
Cow position: chr11:2907416-2907786 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 185, 23

Conread position: 169-550
Cow position: chr11:377528-377916 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 162, 23

Conread position: 169-550
Cow position: chr11:14649196-14649578 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 256
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 24, 32

Conread position: 169-550
Cow position: chr11:41811802-41812177 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 18

Conread position: 169-550
Cow position: chr11:44234468-44234093 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 24

Conread position: 169-550
Cow position: chr11:63065768-63065388 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 265
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 34, 41

Conread position: 169-552
Cow position: chr11:35580374-35579986 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 14

Conread position: 169-554
Cow position: chr11:67747392-67747008 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 209, 18

Conread position: 170-383
Cow position: chr11:31410766-31410984 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 153
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 161, 22

Conread position: 170-398
Cow position: chr11:30494105-30493885 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 163
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 112, 26

Conread position: 170-445
Cow position: chr11:48296142-48295867 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 200
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 161, 17

Conread position: 170-446
Cow position: chr11:81135055-81135328 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 194
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 165, 22

Conread position: 170-505
Cow position: chr11:39462735-39462395 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 230
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 28, 40

Conread position: 170-506
Cow position: chr11:81406053-81406381 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 223
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 57, 53

Conread position: 170-526
Cow position: chr11:15017172-15016802 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 264
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 29, 295

Conread position: 170-535
Cow position: chr11:37278108-37278452 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 254
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 26, 47

Conread position: 170-535
Cow position: chr11:70304189-70303829 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 259
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 21, 37

Conread position: 170-536
Cow position: chr11:29916656-29916284 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 261
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 29, 68

Conread position: 170-536
Cow position: chr11:36940480-36940854 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 247
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 25, 47

Conread position: 170-536
Cow position: chr11:45872196-45872572 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 263
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 27, 46

Conread position: 170-536
Cow position: chr11:64029153-64029510 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 243
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 20, 40

Conread position: 170-537
Cow position: chr11:70836265-70836622 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 256
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 165, 17

Conread position: 170-549
Cow position: chr11:34121312-34120929 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 17

Conread position: 170-550
Cow position: chr11:8988120-8988495 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 261
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 214, 39

Conread position: 170-550
Cow position: chr11:23232406-23232779 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 55

Conread position: 170-550
Cow position: chr11:67931377-67931760 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 261
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 20, 59

Conread position: 171-481
Cow position: chr11:15339173-15338876 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 211
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 16, 0

Conread position: 171-555
Cow position: chr11:77705863-77705494 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 274
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 157, 59

Conread position: 172-384
Cow position: chr11:39060489-39060701 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 155
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 18, 61

Conread position: 172-505
Cow position: chr11:14470475-14470144 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 228
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 53, 15

Conread position: 172-528
Cow position: chr11:62239858-62239504 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 138

Conread position: 172-536
Cow position: chr11:48544550-48544190 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 213

Conread position: 172-537
Cow position: chr11:7590298-7589936 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 21

Conread position: 172-539
Cow position: chr11:40818516-40818895 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 22

Conread position: 172-550
Cow position: chr11:68206732-68207101 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 21

Conread position: 172-552
Cow position: chr11:43898248-43897870 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 214, 15

Conread position: 172-577
Cow position: chr11:3393100-3393502 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 15

Conread position: 173-437
Cow position: chr11:51729395-51729131 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 183
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 205, 20

Conread position: 173-526
Cow position: chr11:42884678-42885014 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 228
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 244, 14

Conread position: 173-548
Cow position: chr11:55052980-55052609 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 267, 19

Conread position: 173-550
Cow position: chr11:10992375-10992014 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 255
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 74, 14

Conread position: 174-378
Cow position: chr11:42159946-42160155 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 161
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 20, 87

Conread position: 174-405
Cow position: chr11:52690410-52690647 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 163
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 16, 47

Conread position: 174-440
Cow position: chr11:45435193-45434926 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 194
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 31, 160

Conread position: 174-448
Cow position: chr11:55494789-55494514 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 196
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 163, 195

Conread position: 174-455
Cow position: chr11:30830504-30830791 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 174-463
Cow position: chr11:2933258-2932969 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 201
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 14, 45

Conread position: 174-472
Cow position: chr11:48496481-48496774 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 17

Conread position: 174-494
Cow position: chr11:65607579-65607905 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 226
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 38, 46

Conread position: 174-515
Cow position: chr11:33348080-33348417 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 232
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 206, 22

Conread position: 174-517
Cow position: chr11:11469539-11469868 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 241
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 200, 18

Conread position: 174-534
Cow position: chr11:18706715-18707065 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 105

Conread position: 174-537
Cow position: chr11:1070983-1071346 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 13

Conread position: 174-537
Cow position: chr11:17036418-17036806 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 377

Conread position: 174-537
Cow position: chr11:78380953-78381301 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 252
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 14, 64

Conread position: 174-549
Cow position: chr11:19247090-19247460 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 268
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 32, 36

Conread position: 174-550
Cow position: chr11:66041386-66041008 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 263
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 33, 13

Conread position: 175-442
Cow position: chr11:42296513-42296780 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 187
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 107, 27

Conread position: 175-484
Cow position: chr11:9463946-9463627 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 218
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 10, 42

Conread position: 175-539
Cow position: chr11:14308747-14308381 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 235
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 33, 42

Conread position: 176-534
Cow position: chr11:45646485-45646845 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 11

Conread position: 176-550
Cow position: chr11:37975043-37974660 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 256
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 14, 25

Conread position: 177-367
Cow position: chr11:82740616-82740424 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 135
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 165, 0

Conread position: 177-370
Cow position: chr11:48086029-48085829 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 140
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 13, 0

Conread position: 177-533
Cow position: chr11:42083574-42083229 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 251
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 35, 15

Conread position: 177-537
Cow position: chr11:68904973-68905317 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 243
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 201, 10

Conread position: 178-526
Cow position: chr11:22977771-22978103 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 239
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 9, 0

Conread position: 178-534
Cow position: chr11:21844035-21844387 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 9

Conread position: 178-550
Cow position: chr11:50152709-50153086 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 16

Conread position: 179-549
Cow position: chr11:47545239-47544863 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 90

Conread position: 180-347
Cow position: chr11:72292656-72292489 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 118
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 180-360
Cow position: chr11:4637067-4637250 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 128
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 10, 0

Conread position: 180-431
Cow position: chr11:70251020-70250774 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 179
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 54, 7

Conread position: 180-442
Cow position: chr11:17493584-17493316 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 187
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 29, 13

Conread position: 180-459
Cow position: chr11:9270623-9270907 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 196
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 149, 36

Conread position: 180-504
Cow position: chr11:2925199-2925512 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 200, 7

Conread position: 180-535
Cow position: chr11:259072-259431 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 7

Conread position: 180-539
Cow position: chr11:56654661-56654291 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 242
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 16, 274

Conread position: 180-550
Cow position: chr11:44636653-44637026 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 14

Conread position: 180-550
Cow position: chr11:45631664-45632030 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 254
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 159, 7

Conread position: 180-550
Cow position: chr11:76114744-76114389 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 256
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 183, 7

Conread position: 180-552
Cow position: chr11:11125764-11125395 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 7

Conread position: 180-552
Cow position: chr11:52297116-52297491 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 129

Conread position: 180-552
Cow position: chr11:53147428-53147807 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 249
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 62, 88

Conread position: 181-340
Cow position: chr11:18447390-18447548 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 115
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 11, 0

Conread position: 181-536
Cow position: chr11:13043045-13043395 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 238
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 154, 6

Conread position: 181-550
Cow position: chr11:17278575-17278927 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 257
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 203, 6

Conread position: 181-550
Cow position: chr11:33414337-33413968 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 266
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 26, 6

Conread position: 181-550
Cow position: chr11:55744568-55744208 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 252
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 225, 43

Conread position: 182-406
Cow position: chr11:62789231-62789002 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 163
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 145, 10

Conread position: 182-439
Cow position: chr11:2575802-2576063 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 179
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 154, 171

Conread position: 182-471
Cow position: chr11:23271901-23272193 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 201
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 16, 46

Conread position: 182-507
Cow position: chr11:69811005-69810679 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 228
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 26, 35

Conread position: 183-548
Cow position: chr11:22499266-22499614 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 250
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 77, 0

Conread position: 184-539
Cow position: chr11:16342129-16342498 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 250

Conread position: 186-530
Cow position: chr11:76606770-76606438 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 235
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 78, 72

Conread position: 186-552
Cow position: chr11:50951652-50951283 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 253
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 24, 36

Conread position: 187-325
Cow position: chr11:897770-897632 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 102
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 187-380
Cow position: chr11:24599292-24599486 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 142
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 150, 30

Conread position: 187-403
Cow position: chr11:65767296-65767078 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 154
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 139, 193

Conread position: 187-439
Cow position: chr11:71390469-71390723 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 189
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 144, 36

Conread position: 187-452
Cow position: chr11:70978641-70978907 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 180
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 219, 21

Conread position: 187-495
Cow position: chr11:23586734-23586422 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 6

Conread position: 187-496
Cow position: chr11:11558269-11557955 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 278

Conread position: 187-505
Cow position: chr11:17661180-17660872 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 221
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 187, 76

Conread position: 187-509
Cow position: chr11:19500695-19501004 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 229
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 102, 0

Conread position: 187-514
Cow position: chr11:21728184-21728499 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 238
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 95, 35

Conread position: 187-522
Cow position: chr11:10213472-10213807 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 38

Conread position: 187-536
Cow position: chr11:56821146-56821510 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 236
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 112, 0

Conread position: 187-536
Cow position: chr11:58400345-58400011 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 221
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 86, 0

Conread position: 187-537
Cow position: chr11:8147802-8148141 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 231
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 158, 127

Conread position: 187-550
Cow position: chr11:6233783-6234144 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 237
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 187, 272

Conread position: 187-550
Cow position: chr11:12111362-12111733 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 258
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 146, 70

Conread position: 187-550
Cow position: chr11:41272234-41271872 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 239
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 146, 108

Conread position: 187-550
Cow position: chr11:73353963-73354321 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 250
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 175, 136

Conread position: 187-550
Cow position: chr11:80530454-80530105 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 249
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 200, 6

Conread position: 188-360
Cow position: chr11:30867279-30867104 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 127
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 143, 0

Conread position: 188-365
Cow position: chr11:62812854-62813033 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 126
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 152, 166

Conread position: 188-459
Cow position: chr11:70086428-70086145 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 190
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 147, 53

Conread position: 188-508
Cow position: chr11:29960391-29960079 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 75

Conread position: 188-527
Cow position: chr11:8525020-8525358 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 198, 9

Conread position: 188-531
Cow position: chr11:2084239-2083899 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 238
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 45, 35

Conread position: 188-532
Cow position: chr11:4662952-4663289 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 229
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 115, 18

Conread position: 188-534
Cow position: chr11:77319510-77319172 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 245
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 155, 192

Conread position: 188-536
Cow position: chr11:18086252-18086592 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 233
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 222, 65

Conread position: 188-536
Cow position: chr11:30355153-30354813 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 5

Conread position: 188-537
Cow position: chr11:25791599-25791947 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 242
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 35, 39

Conread position: 188-537
Cow position: chr11:30934512-30934171 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 229
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 198, 93

Conread position: 188-537
Cow position: chr11:65495244-65495582 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 242
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 99, 71

Conread position: 188-539
Cow position: chr11:49153044-49152697 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 241
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 198, 75

Conread position: 188-540
Cow position: chr11:20602322-20601982 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 243
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 128, 51

Conread position: 188-550
Cow position: chr11:1362372-1362746 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 258
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 132, 357

Conread position: 188-550
Cow position: chr11:18572896-18572538 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 236
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 74, 68

Conread position: 188-550
Cow position: chr11:34113361-34113008 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 256
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 94, 233

Conread position: 188-550
Cow position: chr11:80923227-80923601 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 76

Conread position: 189-537
Cow position: chr11:41985951-41986298 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 237
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 195, 143

Conread position: 189-540
Cow position: chr11:17083215-17083555 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 167

Conread position: 189-544
Cow position: chr11:61427687-61427352 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 232
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 21, 34

Conread position: 189-550
Cow position: chr11:62663140-62663498 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 257
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 191, 73

Conread position: 189-552
Cow position: chr11:53553310-53552989 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 256
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 27, 0

Conread position: 189-552
Cow position: chr11:83043267-83043628 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 269

Conread position: 192-370
Cow position: chr11:33409170-33409347 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 133
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 146, 0

Conread position: 192-550
Cow position: chr11:53778708-53778347 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 259

Conread position: 193-533
Cow position: chr11:35873912-35874235 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 242
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 136, 173

Conread position: 193-550
Cow position: chr11:41809402-41809742 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 245
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 215, 136

Conread position: 193-552
Cow position: chr11:66733920-66733568 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 245
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 14, 22

Conread position: 196-526
Cow position: chr11:47899356-47899033 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 190, 131

Conread position: 196-550
Cow position: chr11:18698967-18698609 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 343

Conread position: 196-550
Cow position: chr11:64638438-64638789 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 247
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 139, 78

Conread position: 196-552
Cow position: chr11:44036807-44036448 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 64

Conread position: 196-552
Cow position: chr11:49934643-49935010 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 250
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 130, 288

Conread position: 196-552
Cow position: chr11:80819917-80820266 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 186, 62

Conread position: 197-389
Cow position: chr11:6194291-6194101 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 136
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 141, 9

Conread position: 197-536
Cow position: chr11:42519819-42519488 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 227
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 13, 26

Conread position: 197-537
Cow position: chr11:8828546-8828883 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 231
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 13, 20

Conread position: 197-550
Cow position: chr11:43646325-43646683 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 238
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 68, 61

Conread position: 197-552
Cow position: chr11:31352465-31352838 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 266
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 126, 351

Conread position: 200-558
Cow position: chr11:40258328-40258677 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 226
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 10, 6

Conread position: 201-550
Cow position: chr11:38641964-38641613 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 225
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 22, 15

Conread position: 201-550
Cow position: chr11:58156173-58155822 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 240
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 29, 15

Conread position: 203-341
Cow position: chr11:36328954-36329091 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 107
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 127, 0

Conread position: 203-365
Cow position: chr11:53279634-53279796 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 121
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 130, 60

Conread position: 203-537
Cow position: chr11:23128459-23128794 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 243

Conread position: 203-550
Cow position: chr11:57945858-57946207 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 230
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 24, 13

Conread position: 203-550
Cow position: chr11:87147184-87147533 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 227
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 24, 13

Conread position: 203-552
Cow position: chr11:11232375-11232722 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 59

Conread position: 203-552
Cow position: chr11:50778448-50778102 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 177, 105

Conread position: 204-460
Cow position: chr11:5543-5286 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 186
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 136, 119

Conread position: 204-535
Cow position: chr11:18525818-18526145 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 220
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 26, 12

Conread position: 204-550
Cow position: chr11:8428591-8428229 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 260

Conread position: 204-552
Cow position: chr11:63469955-63469616 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 201

Conread position: 206-449
Cow position: chr11:75874677-75874921 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 165
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 133, 150

Conread position: 206-549
Cow position: chr11:62880554-62880888 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 231
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 167, 57

Conread position: 206-555
Cow position: chr11:8840668-8841011 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 240
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 27, 75

Conread position: 209-567
Cow position: chr11:13061161-13061504 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 153

Conread position: 214-480
Cow position: chr11:49231943-49231676 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 191
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 9, 13

Conread position: 215-494
Cow position: chr11:53644332-53644612 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 186
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 33, 48

Conread position: 215-533
Cow position: chr11:38639180-38638870 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 221
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 163, 86

Conread position: 215-537
Cow position: chr11:76369452-76369776 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 235
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 8, 17

Conread position: 215-539
Cow position: chr11:71071358-71071682 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 214
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 15, 21

Conread position: 215-549
Cow position: chr11:36194365-36194028 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 221
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 55, 43

Conread position: 215-550
Cow position: chr11:5197006-5197343 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 225
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 15, 21

Conread position: 215-550
Cow position: chr11:16226769-16226440 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 234
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 8, 22

Conread position: 215-550
Cow position: chr11:28847910-28848242 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 221
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 8, 22

Conread position: 215-550
Cow position: chr11:73774801-73774462 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 219
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 8, 15

Conread position: 215-552
Cow position: chr11:58123939-58123602 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 216
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 21, 114

Conread position: 215-571
Cow position: chr11:45897981-45898341 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 143

Conread position: 215-574
Cow position: chr11:36309344-36309699 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 237
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 8, 21

Conread position: 216-363
Cow position: chr11:69392630-69392482 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 113
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 119, 0

Conread position: 216-494
Cow position: chr11:52983743-52983479 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 185
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 113, 0

Conread position: 216-511
Cow position: chr11:67550310-67550592 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 210
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 174, 98

Conread position: 216-536
Cow position: chr11:9221664-9221979 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 225
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 113, 68

Conread position: 216-548
Cow position: chr11:67600852-67600504 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 246
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 122, 335

Conread position: 216-550
Cow position: chr11:34829718-34830045 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 235
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 122, 44

Conread position: 216-550
Cow position: chr11:51144781-51144452 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 225
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 142, 65

Conread position: 216-552
Cow position: chr11:36987017-36986694 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 240
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 168, 98

Conread position: 216-552
Cow position: chr11:58588412-58588076 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 29

Conread position: 217-464
Cow position: chr11:82796222-82796470 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 176
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 108, 135

Conread position: 217-483
Cow position: chr11:5087778-5088050 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 177
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 19, 132

Conread position: 217-512
Cow position: chr11:2509239-2509525 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 202
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 13, 161

Conread position: 217-550
Cow position: chr11:33255644-33255986 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 219
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 81, 88

Conread position: 218-517
Cow position: chr11:14094354-14094659 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 209
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 110, 206

Conread position: 220-545
Cow position: chr11:36647407-36647100 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 228
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 38, 0

Conread position: 226-504
Cow position: chr11:55875945-55875670 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 185
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 159, 9

Conread position: 226-526
Cow position: chr11:30925214-30924909 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 220
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 100, 173

Conread position: 226-550
Cow position: chr11:30120604-30120929 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 238
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 101, 52

Conread position: 226-550
Cow position: chr11:53452292-53452611 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 214
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 89, 11

Conread position: 229-522
Cow position: chr11:67804804-67804509 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 215
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 145, 100

Conread position: 229-550
Cow position: chr11:36203292-36202968 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 207
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 7, 101

Conread position: 230-535
Cow position: chr11:3833309-3833600 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 215
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 213, 38

Conread position: 231-365
Cow position: chr11:54218767-54218635 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 111
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 95, 0

Conread position: 231-492
Cow position: chr11:63434005-63434268 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 182
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 155, 106

Conread position: 231-500
Cow position: chr11:61858850-61859117 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 187
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 179, 147

Conread position: 231-533
Cow position: chr11:59902943-59902636 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 204
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 155, 123

Conread position: 231-534
Cow position: chr11:83323616-83323322 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 213
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 155, 91

Conread position: 231-537
Cow position: chr11:27939536-27939232 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 213
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 85, 20

Conread position: 231-543
Cow position: chr11:42359167-42358866 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 217
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 94, 144

Conread position: 231-550
Cow position: chr11:24937718-24937397 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 191

Conread position: 231-550
Cow position: chr11:43360731-43361066 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 245
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 95, 29

Conread position: 231-552
Cow position: chr11:56892871-56892552 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 208
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 7, 43

Conread position: 232-535
Cow position: chr11:5031724-5032030 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 217
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 117, 42

Conread position: 232-540
Cow position: chr11:63156866-63157170 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 211
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 161, 68

Conread position: 232-550
Cow position: chr11:32198994-32198675 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 222
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 36, 107

Conread position: 232-552
Cow position: chr11:1668721-1668407 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 217
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 76, 5

Conread position: 232-567
Cow position: chr11:11752465-11752801 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 220
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 30, 26

Conread position: 233-557
Cow position: chr11:30597044-30596721 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 230
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 100, 220

Conread position: 234-371
Cow position: chr11:11044983-11045121 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 106
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 98, 42

Conread position: 234-419
Cow position: chr11:67615197-67615382 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 133
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 99, 30

Conread position: 234-455
Cow position: chr11:28993688-28993904 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 156
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 152, 71

Conread position: 234-536
Cow position: chr11:81162383-81162685 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 145

Conread position: 234-550
Cow position: chr11:24602014-24601704 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 124

Conread position: 234-550
Cow position: chr11:30911954-30912257 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 0

Conread position: 234-550
Cow position: chr11:65826701-65826997 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 218
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 145, 86

Conread position: 234-550
Cow position: chr11:80520999-80520703 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 214
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 64, 0

Conread position: 234-552
Cow position: chr11:55761918-55761612 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 225
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 28, 23

Conread position: 234-552
Cow position: chr11:62490488-62490166 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 181

Conread position: 235-452
Cow position: chr11:41175900-41176122 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 153
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 93, 0

Conread position: 235-454
Cow position: chr11:71009177-71008961 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 154
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 83, 22

Conread position: 235-459
Cow position: chr11:83687385-83687607 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 156
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 106, 94

Conread position: 235-461
Cow position: chr11:81611817-81611588 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 153
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 108, 93

Conread position: 235-468
Cow position: chr11:37804505-37804743 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 168
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 92, 0

Conread position: 235-473
Cow position: chr11:20684523-20684770 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 176
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 100, 0

Conread position: 235-476
Cow position: chr11:5075179-5075416 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 163
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 169, 138

Conread position: 235-476
Cow position: chr11:79960736-79960985 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 166
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 107, 0

Conread position: 235-492
Cow position: chr11:875548-875805 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 178
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 85, 21

Conread position: 235-494
Cow position: chr11:26551464-26551203 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 189
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 44, 87

Conread position: 235-494
Cow position: chr11:33286908-33287173 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 184
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 100, 139

Conread position: 235-503
Cow position: chr11:35724017-35723756 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 188
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 152, 65

Conread position: 235-511
Cow position: chr11:38874353-38874630 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 197
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 111, 225

Conread position: 235-515
Cow position: chr11:31417470-31417203 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 193
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 155, 60

Conread position: 235-518
Cow position: chr11:10686838-10687123 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 196
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 113, 29

Conread position: 235-518
Cow position: chr11:23385194-23385480 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 197
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 104, 128

Conread position: 235-518
Cow position: chr11:31225763-31226029 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 202
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 65, 83

Conread position: 235-525
Cow position: chr11:57724776-57725071 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 211
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 145, 101

Conread position: 235-527
Cow position: chr11:48672761-48672456 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 217
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 101, 65

Conread position: 235-531
Cow position: chr11:7458233-7458534 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 199
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 100, 233

Conread position: 235-531
Cow position: chr11:18340992-18341285 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 52

Conread position: 235-533
Cow position: chr11:17889680-17889977 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 208
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 17, 96

Conread position: 235-534
Cow position: chr11:5416933-5416649 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 207
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 145, 92

Conread position: 235-535
Cow position: chr11:3726337-3726033 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 216
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 120, 111

Conread position: 235-535
Cow position: chr11:33349652-33349954 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 92

Conread position: 235-535
Cow position: chr11:42002899-42003209 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 220
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 143, 63

Conread position: 235-535
Cow position: chr11:70382642-70382948 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 215
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 42, 68

Conread position: 235-535
Cow position: chr11:81282006-81281692 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 213
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 81, 0

Conread position: 235-536
Cow position: chr11:8496081-8495783 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 207
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 151, 92

Conread position: 235-536
Cow position: chr11:30764539-30764226 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 218
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 57, 69

Conread position: 235-536
Cow position: chr11:31525927-31525611 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 218
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 25, 277

Conread position: 235-536
Cow position: chr11:34616308-34616015 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 207
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 27, 94

Conread position: 235-536
Cow position: chr11:45277103-45277410 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 215
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 147, 30

Conread position: 235-536
Cow position: chr11:56728998-56728693 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 74

Conread position: 235-537
Cow position: chr11:17495693-17496000 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 213
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 89, 259

Conread position: 235-537
Cow position: chr11:39163328-39163022 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 196
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 30, 23

Conread position: 235-537
Cow position: chr11:59463590-59463890 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 201
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 57, 46

Conread position: 235-537
Cow position: chr11:83397954-83397650 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 207
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 145, 252

Conread position: 235-538
Cow position: chr11:21437674-21437372 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 194
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 96, 118

Conread position: 235-548
Cow position: chr11:15467507-15467206 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 214
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 182, 33

Conread position: 235-548
Cow position: chr11:80787858-80788174 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 217
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 104, 232

Conread position: 235-549
Cow position: chr11:3720302-3719987 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 220
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 112, 32

Conread position: 235-549
Cow position: chr11:4323407-4323102 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 219
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 102, 93

Conread position: 235-549
Cow position: chr11:50235928-50236233 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 216
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 93, 44

Conread position: 235-550
Cow position: chr11:866339-866033 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 223
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 162, 65

Conread position: 235-550
Cow position: chr11:2788442-2788114 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 241
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 82, 251

Conread position: 235-550
Cow position: chr11:3780369-3780690 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 226
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 90, 168

Conread position: 235-550
Cow position: chr11:4436368-4436067 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 225
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 151, 92

Conread position: 235-550
Cow position: chr11:4732391-4732073 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 224
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 151, 201

Conread position: 235-550
Cow position: chr11:8563100-8563415 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 212
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 44, 84

Conread position: 235-550
Cow position: chr11:8563914-8564240 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 211
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 51, 311

Conread position: 235-550
Cow position: chr11:12316036-12316352 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 214
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 121, 67

Conread position: 235-550
Cow position: chr11:14361599-14361916 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 208
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 94, 7

Conread position: 235-550
Cow position: chr11:18588537-18588846 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 175, 151

Conread position: 235-550
Cow position: chr11:23251544-23251868 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 228
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 16, 41

Conread position: 235-550
Cow position: chr11:26483760-26483454 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 224
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 151, 47

Conread position: 235-550
Cow position: chr11:32378236-32377922 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 28

Conread position: 235-550
Cow position: chr11:32595506-32595201 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 227
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 160, 81

Conread position: 235-550
Cow position: chr11:32750159-32749842 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 219
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 151, 31

Conread position: 235-550
Cow position: chr11:36799258-36799561 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 222
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 145, 92

Conread position: 235-550
Cow position: chr11:41166696-41167010 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 218
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 45, 55

Conread position: 235-550
Cow position: chr11:43524657-43524357 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 225
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 34, 23

Conread position: 235-550
Cow position: chr11:43594044-43593727 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 220
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 44, 91

Conread position: 235-550
Cow position: chr11:44819142-44818831 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 217
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 151, 81

Conread position: 235-550
Cow position: chr11:46329548-46329234 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 214
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 47, 98

Conread position: 235-550
Cow position: chr11:46580406-46580098 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 224
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 93, 153

Conread position: 235-550
Cow position: chr11:70273355-70273036 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 226
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 105, 93

Conread position: 235-550
Cow position: chr11:71168541-71168843 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 207
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 100, 94

Conread position: 235-550
Cow position: chr11:77745203-77745519 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 227
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 97, 206

Conread position: 235-550
Cow position: chr11:80761329-80761645 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 229
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 52, 24

Conread position: 235-550
Cow position: chr11:83357443-83357127 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 228
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 120, 33

Conread position: 235-550
Cow position: chr11:85723746-85723436 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 224
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 60, 68

Conread position: 235-552
Cow position: chr11:10620279-10620593 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 133

Conread position: 235-552
Cow position: chr11:15504161-15503833 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 229
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 93, 73

Conread position: 235-552
Cow position: chr11:25337114-25336808 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 221
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 160, 62

Conread position: 235-552
Cow position: chr11:36981612-36981300 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 214
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 103, 135

Conread position: 235-552
Cow position: chr11:40467075-40467391 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 228
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 21, 83

Conread position: 235-552
Cow position: chr11:47351387-47351086 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 213
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 62, 17

Conread position: 235-552
Cow position: chr11:61203214-61202895 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 222
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 93, 164

Conread position: 235-552
Cow position: chr11:79728619-79728941 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 100

Conread position: 235-552
Cow position: chr11:80592336-80592022 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 206
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 100, 81

Conread position: 235-552
Cow position: chr11:81300572-81300880 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 228
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 151, 82

Conread position: 235-553
Cow position: chr11:51756348-51756048 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 219
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 175, 60

Conread position: 235-555
Cow position: chr11:31413507-31413180 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 215
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 44, 232

Conread position: 235-558
Cow position: chr11:287287-287608 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 223
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 100, 92

Conread position: 235-568
Cow position: chr11:51293359-51293694 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 221
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 39, 91

Conread position: 235-575
Cow position: chr11:17860107-17860443 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 242
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 145, 108

Conread position: 236-494
Cow position: chr11:30295328-30295066 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 175
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 93, 110

Conread position: 236-534
Cow position: chr11:5226683-5226993 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 213
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 33, 109

Conread position: 236-550
Cow position: chr11:62155686-62155365 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 232
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 91, 248

Conread position: 236-550
Cow position: chr11:81138258-81137956 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 224
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 144, 11

Conread position: 237-534
Cow position: chr11:33293732-33294043 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 227
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 99, 91

Conread position: 237-535
Cow position: chr11:439616-439911 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 204
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 65, 127

Conread position: 237-537
Cow position: chr11:35881957-35881657 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 208
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 111, 57

Conread position: 237-546
Cow position: chr11:87155566-87155251 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 222
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 103, 42

Conread position: 237-549
Cow position: chr11:21549527-21549231 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 217
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 173, 96

Conread position: 237-550
Cow position: chr11:6835580-6835262 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 226
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 45, 54

Conread position: 237-550
Cow position: chr11:8827826-8827514 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 208
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 101, 92

Conread position: 237-550
Cow position: chr11:13191281-13190954 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 231
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 56, 120

Conread position: 237-550
Cow position: chr11:47193561-47193258 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 204
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 155, 21

Conread position: 237-550
Cow position: chr11:54856663-54856369 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 222
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 173, 90

Conread position: 237-550
Cow position: chr11:64090050-64090352 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 0

Conread position: 237-558
Cow position: chr11:27681548-27681226 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 210
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 70, 183

Conread position: 237-577
Cow position: chr11:30721145-30720805 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 229
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 91, 193

Conread position: 238-406
Cow position: chr11:80537533-80537360 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 129
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 88, 10

Conread position: 238-497
Cow position: chr11:53925809-53925546 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 173
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 135, 112

Conread position: 238-497
Cow position: chr11:79986161-79985899 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 179
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 97, 133

Conread position: 238-536
Cow position: chr11:63519045-63518761 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 207
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 42, 12

Conread position: 238-550
Cow position: chr11:21857009-21856694 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 213
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 80, 145

Conread position: 238-552
Cow position: chr11:63482384-63482693 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 219
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 148, 45

Conread position: 238-554
Cow position: chr11:84724700-84724382 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 213
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 105, 62

Conread position: 239-550
Cow position: chr11:72314589-72314280 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 201
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 92, 63

Conread position: 240-549
Cow position: chr11:16910315-16910631 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 221
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 41, 104

Conread position: 240-550
Cow position: chr11:44642244-44642551 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 224
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 79, 15

Conread position: 241-365
Cow position: chr11:1779286-1779411 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 100
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 86, 35

Conread position: 241-538
Cow position: chr11:77766552-77766854 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 210
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 93, 154

Conread position: 241-552
Cow position: chr11:15632511-15632823 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 128

Conread position: 242-442
Cow position: chr11:56187654-56187457 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 148
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 101, 35

Conread position: 242-540
Cow position: chr11:48697486-48697190 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 212
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 100, 31

Conread position: 243-538
Cow position: chr11:42792932-42793231 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 0

Conread position: 244-504
Cow position: chr11:2811690-2811945 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 186
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 93, 217

Conread position: 244-537
Cow position: chr11:81336942-81337227 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 200
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 24, 14

Conread position: 245-469
Cow position: chr11:57170791-57171016 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 153
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 132, 197

Conread position: 245-472
Cow position: chr11:48041994-48042233 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 163
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 37, 0

Conread position: 245-550
Cow position: chr11:955407-955099 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 217
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 11, 239

Conread position: 247-550
Cow position: chr11:27386302-27386605 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 214
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 88, 208

Conread position: 247-552
Cow position: chr11:65431091-65430797 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 65

Conread position: 247-577
Cow position: chr11:8339369-8339697 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 231
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 83, 202

Conread position: 248-506
Cow position: chr11:61246423-61246681 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 178
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 110, 83

Conread position: 248-511
Cow position: chr11:18591398-18591662 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 89

Conread position: 249-550
Cow position: chr11:10076803-10076509 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 205
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 82, 203

Conread position: 251-536
Cow position: chr11:81174918-81174636 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 209
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 11, 34

Conread position: 251-550
Cow position: chr11:18210315-18210614 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 207
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 25, 35

Conread position: 252-536
Cow position: chr11:6154440-6154158 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 25

Conread position: 259-535
Cow position: chr11:40485910-40486186 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 195
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 46, 73

Conread position: 260-536
Cow position: chr11:171678-171950 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 188
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 82, 68

Conread position: 263-550
Cow position: chr11:16251223-16251515 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 189

Conread position: 264-482
Cow position: chr11:8936472-8936687 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 163
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 59, 17

Conread position: 264-549
Cow position: chr11:38810329-38810615 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 205
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 91, 25

Conread position: 264-550
Cow position: chr11:70459583-70459309 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 197
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 64, 91

Conread position: 264-550
Cow position: chr11:83196517-83196234 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 198
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 116, 31

Conread position: 264-552
Cow position: chr11:18388853-18389124 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 202
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 190, 61

Conread position: 267-503
Cow position: chr11:21830332-21830573 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 168
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 62, 10

Conread position: 267-537
Cow position: chr11:37347495-37347220 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 197
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 113, 62

Conread position: 267-550
Cow position: chr11:29615307-29615030 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 183
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 150, 62

Conread position: 268-537
Cow position: chr11:62979506-62979223 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 199
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 76, 0

Conread position: 268-552
Cow position: chr11:38194173-38193884 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 202
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 69, 267

Conread position: 270-550
Cow position: chr11:32747573-32747291 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 186
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 86, 59

Conread position: 272-550
Cow position: chr11:4412010-4412285 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 55

Conread position: 273-550
Cow position: chr11:4597531-4597251 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 182
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 112, 56

Conread position: 273-550
Cow position: chr11:57760813-57760535 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 184
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 56, 48

Conread position: 273-550
Cow position: chr11:74390017-74389738 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 182
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 112, 56

Conread position: 275-551
Cow position: chr11:25320064-25319784 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 21

Conread position: 276-496
Cow position: chr11:36301069-36301295 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 160
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 6, 57

Conread position: 277-530
Cow position: chr11:5677730-5677473 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 183
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 101, 44

Conread position: 280-533
Cow position: chr11:41239265-41239525 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 181
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 48, 144

Conread position: 281-552
Cow position: chr11:7333717-7333989 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 193
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 24, 56

Conread position: 283-533
Cow position: chr11:41577019-41577259 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 173
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 103, 44

Conread position: 283-536
Cow position: chr11:8105786-8105529 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 193
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 44, 75

Conread position: 283-543
Cow position: chr11:63516828-63516564 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 255

Conread position: 283-548
Cow position: chr11:41983456-41983710 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 183
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 97, 30

Conread position: 283-550
Cow position: chr11:31901047-31900783 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 194
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 56, 44

Conread position: 283-550
Cow position: chr11:47586349-47586611 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 196
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 97, 60

Conread position: 283-552
Cow position: chr11:62965547-62965821 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 198
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 64, 171

Conread position: 283-554
Cow position: chr11:47165140-47165406 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 199
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 55, 73

Conread position: 283-595
Cow position: chr11:65857861-65857548 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 216
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 60, 195

Conread position: 284-517
Cow position: chr11:35668711-35668953 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 166
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 32, 49

Conread position: 284-550
Cow position: chr11:32432141-32431871 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 185
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 59, 45

Conread position: 284-550
Cow position: chr11:65970459-65970189 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 181
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 94, 125

Conread position: 284-552
Cow position: chr11:6156555-6156814 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 187
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 103, 54

Conread position: 285-435
Cow position: chr11:70740978-70741131 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 120
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 18, 43

Conread position: 285-502
Cow position: chr11:1599371-1599167 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 164
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 42, 0

Conread position: 285-517
Cow position: chr11:7445040-7444805 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 161
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 101, 171

Conread position: 285-543
Cow position: chr11:24008077-24007829 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 178
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 48, 111

Conread position: 285-549
Cow position: chr11:1485360-1485625 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 200
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 21, 43

Conread position: 285-550
Cow position: chr11:65988227-65987965 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 185
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 95, 45

Conread position: 285-550
Cow position: chr11:67345655-67345910 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 181
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 85, 48

Conread position: 285-551
Cow position: chr11:59155878-59156137 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 192
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 47, 74

Conread position: 285-552
Cow position: chr11:30952514-30952786 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 178
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 44, 254

Conread position: 286-503
Cow position: chr11:61120744-61120523 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 149
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 99, 43

Conread position: 286-540
Cow position: chr11:86925939-86926177 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 179
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 7, 43

Conread position: 286-550
Cow position: chr11:15048407-15048141 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 174
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 99, 43

Conread position: 286-550
Cow position: chr11:18097568-18097834 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 175
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 99, 43

Conread position: 286-550
Cow position: chr11:24334712-24334446 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 174
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 99, 43

Conread position: 286-550
Cow position: chr11:24731929-24731665 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 174
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 45, 60

Conread position: 286-550
Cow position: chr11:41259979-41260245 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 175
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 99, 43

Conread position: 286-550
Cow position: chr11:41421832-41422098 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 177
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 99, 43

Conread position: 286-550
Cow position: chr11:43369398-43369664 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 175
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 99, 43

Conread position: 286-550
Cow position: chr11:60628941-60629206 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 175
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 99, 43

Conread position: 286-550
Cow position: chr11:60778532-60778266 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 180
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 101, 43

Conread position: 286-550
Cow position: chr11:63185549-63185815 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 176
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 99, 43

Conread position: 286-550
Cow position: chr11:66529583-66529849 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 174
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 99, 43

Conread position: 286-550
Cow position: chr11:72050941-72050675 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 181
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 101, 45

Conread position: 286-550
Cow position: chr11:75222889-75222627 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 174
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 100, 41

Conread position: 286-550
Cow position: chr11:84184731-84184465 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 175
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 99, 43

Conread position: 286-552
Cow position: chr11:71846351-71846616 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 9

Conread position: 286-554
Cow position: chr11:64951337-64951605 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 178
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 99, 43

Conread position: 287-485
Cow position: chr11:81340508-81340703 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 115
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 46, 81

Conread position: 287-491
Cow position: chr11:36672047-36672259 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 150
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 93, 46

Conread position: 287-515
Cow position: chr11:2514597-2514825 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 160
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 54, 100

Conread position: 287-536
Cow position: chr11:2050576-2050326 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 182
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 87, 36

Conread position: 287-537
Cow position: chr11:2309869-2309619 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 187
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 59, 134

Conread position: 287-550
Cow position: chr11:50197436-50197710 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 51

Conread position: 287-550
Cow position: chr11:51043931-51044202 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 184
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 46, 256

Conread position: 287-552
Cow position: chr11:17968585-17968843 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 104

Conread position: 287-552
Cow position: chr11:67950975-67951231 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 0

Conread position: 288-533
Cow position: chr11:30110958-30110717 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 173
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 92, 123

Conread position: 288-536
Cow position: chr11:48932591-48932837 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 180
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 94, 44

Conread position: 288-537
Cow position: chr11:77208038-77207794 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 176
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 98, 52

Conread position: 289-535
Cow position: chr11:81614645-81614885 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 166
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 57, 170

Conread position: 289-537
Cow position: chr11:32609993-32609737 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 183
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 97, 45

Conread position: 289-550
Cow position: chr11:17112637-17112892 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 195
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 51, 103

Conread position: 290-550
Cow position: chr11:49074301-49074559 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 186
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 39, 80

Conread position: 290-566
Cow position: chr11:21819448-21819730 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 199
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 51, 7

Conread position: 291-550
Cow position: chr11:55117457-55117207 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 185
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 40, 0

Conread position: 291-552
Cow position: chr11:64334844-64334590 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 30

Conread position: 292-552
Cow position: chr11:53130805-53130545 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 192
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 33, 176

Conread position: 295-498
Cow position: chr11:17553356-17553562 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 151
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 48, 34

Conread position: 296-537
Cow position: chr11:18484181-18484414 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 174
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 32, 84

Conread position: 296-538
Cow position: chr11:3704292-3704064 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 181
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 41, 27

Conread position: 301-530
Cow position: chr11:77241353-77241126 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 167
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 79, 133

Conread position: 301-537
Cow position: chr11:6580801-6580559 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 164
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 27, 0

Conread position: 301-538
Cow position: chr11:75748417-75748179 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 176
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 23, 174

Conread position: 301-550
Cow position: chr11:9837115-9837363 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 185
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 27, 164

Conread position: 301-550
Cow position: chr11:49106040-49105793 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 177
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 79, 151

Conread position: 301-550
Cow position: chr11:68570686-68570937 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 188
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 68, 26

Conread position: 302-483
Cow position: chr11:47851008-47850826 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 142
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 73, 41

Conread position: 302-503
Cow position: chr11:65079930-65079729 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 145
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 84, 20

Conread position: 302-515
Cow position: chr11:5526589-5526805 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 151
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 41, 31

Conread position: 302-530
Cow position: chr11:62808670-62808896 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 174
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 78, 27

Conread position: 302-536
Cow position: chr11:3175364-3175125 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 164
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 19, 28

Conread position: 302-536
Cow position: chr11:59672856-59673090 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 162
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 97, 25

Conread position: 302-550
Cow position: chr11:37068335-37068568 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 183
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 105, 31

Conread position: 302-550
Cow position: chr11:59370996-59370749 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 178
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 35, 121

Conread position: 302-550
Cow position: chr11:68631710-68631960 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 170
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 88, 27

Conread position: 302-552
Cow position: chr11:43914197-43913955 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 185
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 28, 150

Conread position: 302-552
Cow position: chr11:62749774-62750017 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 0

Conread position: 302-559
Cow position: chr11:986912-986664 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 185
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 83, 28

Conread position: 305-549
Cow position: chr11:81143573-81143823 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 171
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 83, 22

Conread position: 305-550
Cow position: chr11:64088010-64087768 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 169
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 24, 74

Conread position: 306-482
Cow position: chr11:33364321-33364142 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 131
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 68, 37

Conread position: 306-525
Cow position: chr11:37100379-37100602 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 157
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 80, 26

Conread position: 306-550
Cow position: chr11:2773266-2773020 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 169
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 81, 23

Conread position: 306-550
Cow position: chr11:22617016-22617262 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 168
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 81, 23

Conread position: 306-550
Cow position: chr11:41269452-41269698 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 165
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 79, 23

Conread position: 306-550
Cow position: chr11:47846919-47846674 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 166
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 79, 39

Conread position: 307-550
Cow position: chr11:4384596-4384360 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 174
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 73, 29

Conread position: 307-551
Cow position: chr11:62045373-62045132 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 172
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 79, 123

Conread position: 307-552
Cow position: chr11:58102798-58103042 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 181
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 32, 82

Conread position: 309-552
Cow position: chr11:46473702-46473953 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 179
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 12, 223

Conread position: 310-520
Cow position: chr11:59473355-59473146 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 148
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 87, 23

Conread position: 311-567
Cow position: chr11:62019620-62019879 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 185
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 26, 16

Conread position: 313-539
Cow position: chr11:63520745-63520516 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 174
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 16, 132

Conread position: 313-579
Cow position: chr11:12174859-12175120 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 175
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 32, 97

Conread position: 314-518
Cow position: chr11:30867111-30866907 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 153
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 17, 105

Conread position: 314-550
Cow position: chr11:7315161-7315392 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 174
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 14, 32

Conread position: 317-515
Cow position: chr11:12949980-12950182 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 141
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 65, 10

Conread position: 317-537
Cow position: chr11:19215980-19216201 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 155
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 65, 20

Conread position: 318-550
Cow position: chr11:51687759-51687991 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 166
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 24, 15

Conread position: 318-552
Cow position: chr11:64932331-64932563 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 169
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 13, 51

Conread position: 319-552
Cow position: chr11:62739183-62738948 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 162
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 62, 10

Conread position: 319-571
Cow position: chr11:9253055-9253308 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 181
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 61, 10

Conread position: 320-525
Cow position: chr11:49410381-49410578 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 141
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 13, 0

Conread position: 320-550
Cow position: chr11:38831403-38831636 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 163
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 23, 9

Conread position: 320-552
Cow position: chr11:38843535-38843296 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 166
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 16, 222

Conread position: 321-526
Cow position: chr11:25165407-25165200 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 165
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 7, 158

Conread position: 322-552
Cow position: chr11:20491534-20491306 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 161
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 20, 138

Conread position: 323-503
Cow position: chr11:79814755-79814937 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 132
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 57, 29

Conread position: 323-550
Cow position: chr11:15500810-15501037 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 157
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 59, 10

Conread position: 324-535
Cow position: chr11:34413058-34412844 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 154
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 21, 25

Conread position: 327-536
Cow position: chr11:39808948-39808736 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 146
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 10, 71

Conread position: 327-552
Cow position: chr11:48650752-48650527 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 158
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 10, 33

Conread position: 328-550
Cow position: chr11:25807799-25808024 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 158
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 77, 61

Conread position: 329-550
Cow position: chr11:7536292-7536514 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 154
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 51, 16

Conread position: 329-550
Cow position: chr11:35276257-35276035 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 163
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 7, 91

Conread position: 329-550
Cow position: chr11:38829164-38828946 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 149
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 88, 44

Conread position: 329-550
Cow position: chr11:41598770-41598993 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 169
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 49, 73

Conread position: 329-551
Cow position: chr11:19238201-19238423 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 160
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 8, 20

Conread position: 329-552
Cow position: chr11:61846044-61846273 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 165
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 5, 34

Conread position: 329-553
Cow position: chr11:48901126-48901349 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 165
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 53, 134

Conread position: 330-556
Cow position: chr11:34121717-34121486 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 160
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 50, 199

Conread position: 331-550
Cow position: chr11:53313620-53313834 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 153
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 28, 0

Conread position: 331-567
Cow position: chr11:57111352-57111588 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 176
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 9, 92

Conread position: 333-526
Cow position: chr11:84924144-84924342 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 141
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 47, 32

Conread position: 333-536
Cow position: chr11:7298438-7298637 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 139
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 62, 0

Conread position: 333-550
Cow position: chr11:10388646-10388862 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 155
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 13, 112

Conread position: 333-550
Cow position: chr11:58614614-58614395 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 153
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 12, 199

Conread position: 333-552
Cow position: chr11:19508246-19508029 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 180
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 139

Conread position: 334-549
Cow position: chr11:50112139-50111927 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 163
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 28, 53

Conread position: 334-550
Cow position: chr11:65693888-65694102 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 153
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 48, 95

Conread position: 335-536
Cow position: chr11:60512735-60512531 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 148
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 43, 24

Conread position: 336-533
Cow position: chr11:73478567-73478370 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 142
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 54, 50

Conread position: 336-549
Cow position: chr11:17192334-17192546 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 158
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 42, 75

Conread position: 337-536
Cow position: chr11:75355555-75355356 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 158
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 43, 31

Conread position: 337-550
Cow position: chr11:74929730-74929512 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 157
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 49, 0

Conread position: 339-550
Cow position: chr11:35238779-35238563 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 160
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 45, 201

Conread position: 340-526
Cow position: chr11:25783429-25783248 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 140
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 70, 51

Conread position: 340-549
Cow position: chr11:70617793-70617581 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 156
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 77, 103

Conread position: 343-551
Cow position: chr11:84890809-84891018 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 160
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 43, 194

Conread position: 343-552
Cow position: chr11:35363439-35363228 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 167
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 43, 195

Conread position: 347-549
Cow position: chr11:39057565-39057374 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 147
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 48, 0

Conread position: 348-508
Cow position: chr11:10364259-10364422 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 126
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 102, 30

Conread position: 354-550
Cow position: chr11:38053443-38053642 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 139
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 27, 184

Conread position: 357-540
Cow position: chr11:10294512-10294338 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 133
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 19, 0

Conread position: 358-567
Cow position: chr11:30172293-30172088 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 152
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 16, 0

Conread position: 360-550
Cow position: chr11:38009887-38010077 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 140
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 22, 105

Conread position: 367-506
Cow position: chr11:83033785-83033923 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 110
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 133, 0

Conread position: 369-550
Cow position: chr11:85189471-85189649 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 131
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 18, 0

Conread position: 373-537
Cow position: chr11:10877147-10876983 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 121
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 5, 97

Conread position: 374-536
Cow position: chr11:7414944-7415100 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 125
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 13, 0

Conread position: 374-549
Cow position: chr11:60470269-60470444 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 132
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 12, 90

Conread position: 376-536
Cow position: chr11:18913164-18913009 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 118
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 19, 0

Conread position: 377-536
Cow position: chr11:71309623-71309782 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 125
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 40, 97

Conread position: 377-547
Cow position: chr11:31227891-31227732 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 134
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 9, 24

Conread position: 377-550
Cow position: chr11:71705496-71705668 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 128
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 11, 146

Conread position: 377-552
Cow position: chr11:62376533-62376704 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 134
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 66, 0

Conread position: 378-535
Cow position: chr11:6639412-6639258 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 121
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 29, 76

Conread position: 378-536
Cow position: chr11:15608389-15608547 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 122
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 378-536
Cow position: chr11:53719845-53719691 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 118
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 55, 0

Conread position: 378-537
Cow position: chr11:7021291-7021129 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 116
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 39, 0

Conread position: 378-541
Cow position: chr11:75480126-75480285 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 126
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 32, 65

Conread position: 378-549
Cow position: chr11:10875928-10875758 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 123
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 39, 156

Conread position: 378-550
Cow position: chr11:31885420-31885252 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 128
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 26, 62

Conread position: 378-550
Cow position: chr11:55348168-55347997 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 132
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 17, 156

Conread position: 378-550
Cow position: chr11:58600766-58600595 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 124
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 39, 136

Conread position: 378-552
Cow position: chr11:60302057-60302225 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 133
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 83, 0

Conread position: 379-486
Cow position: chr11:38667661-38667552 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 89
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 31, 0

Conread position: 379-527
Cow position: chr11:26277190-26277335 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 118
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 59, 0

Conread position: 379-550
Cow position: chr11:37118390-37118219 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 140
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 31, 130

Conread position: 379-552
Cow position: chr11:35283025-35282855 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 132
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 20, 38

Conread position: 379-552
Cow position: chr11:37563364-37563202 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 132
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 54, 35

Conread position: 380-536
Cow position: chr11:6620385-6620545 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 122
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 30, 0

Conread position: 380-537
Cow position: chr11:16795252-16795406 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 122
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 36, 0

Conread position: 383-550
Cow position: chr11:75510335-75510498 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 135
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 14, 0

Conread position: 383-551
Cow position: chr11:83925138-83924974 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 127
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 43, 0

Conread position: 385-558
Cow position: chr11:34467492-34467323 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 134
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 156, 66

Conread position: 386-550
Cow position: chr11:63920395-63920553 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 127
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 22, 0

Conread position: 391-533
Cow position: chr11:31873458-31873315 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 107
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 19, 0

Conread position: 391-550
Cow position: chr11:5790024-5790181 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 122
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 145, 67

Conread position: 391-550
Cow position: chr11:40608830-40608986 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 130
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 15, 49

Conread position: 396-550
Cow position: chr11:3303719-3303571 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 120
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 48, 0

Conread position: 397-530
Cow position: chr11:64405451-64405584 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 112
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 397-550
Cow position: chr11:64048204-64048055 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 112
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 71, 0

Conread position: 399-552
Cow position: chr11:57498928-57499081 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 122
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 92, 37

Conread position: 400-539
Cow position: chr11:34692397-34692258 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 106
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 400-541
Cow position: chr11:3241240-3241103 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 108
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 44, 0

Conread position: 400-548
Cow position: chr11:32072028-32071886 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 112
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 45, 0

Conread position: 401-550
Cow position: chr11:32194282-32194433 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 115
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 50, 131

Conread position: 402-532
Cow position: chr11:30466739-30466869 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 108
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 403-552
Cow position: chr11:63166286-63166427 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 118
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 11, 0

Conread position: 403-552
Cow position: chr11:78480677-78480527 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 123
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 74, 0

Conread position: 404-552
Cow position: chr11:49873303-49873158 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 118
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 45, 0

Conread position: 409-534
Cow position: chr11:70205914-70205793 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 99
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 52, 0

Conread position: 409-536
Cow position: chr11:32067168-32067289 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 101
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 86, 0

Conread position: 409-536
Cow position: chr11:56751514-56751639 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 106
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 79, 0

Conread position: 409-537
Cow position: chr11:51177376-51177248 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 97
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 409-537
Cow position: chr11:80809773-80809901 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 98
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 409-550
Cow position: chr11:2910951-2911086 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 110
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 61, 0

Conread position: 410-536
Cow position: chr11:85271827-85271952 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 98
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 19, 0

Conread position: 410-537
Cow position: chr11:51022423-51022550 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 98
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 411-536
Cow position: chr11:6046700-6046825 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 97
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 411-550
Cow position: chr11:36125547-36125409 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 108
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 48, 112

Conread position: 413-567
Cow position: chr11:32218128-32218280 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 119
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 65, 122

Conread position: 416-536
Cow position: chr11:9234491-9234374 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 100
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 35, 0

Conread position: 416-536
Cow position: chr11:10545856-10545736 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 97
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 416-536
Cow position: chr11:57481004-57481119 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 97
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 61, 0

Conread position: 416-537
Cow position: chr11:23418894-23418773 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 95
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 416-549
Cow position: chr11:70838439-70838567 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 106
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 14, 0

Conread position: 416-550
Cow position: chr11:81922749-81922615 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 102
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 416-551
Cow position: chr11:29608304-29608437 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 106
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 117, 0

Conread position: 416-552
Cow position: chr11:70163768-70163632 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 105
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 113, 118

Conread position: 416-558
Cow position: chr11:72789694-72789829 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 114
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 138, 9

Conread position: 417-536
Cow position: chr11:18891145-18891026 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 94
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 417-566
Cow position: chr11:82345348-82345496 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 115
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 137, 116

Conread position: 418-550
Cow position: chr11:52464303-52464174 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 103
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 53, 21

Conread position: 422-538
Cow position: chr11:28843316-28843200 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 94
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 422-548
Cow position: chr11:17515120-17514996 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 100
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 111, 62

Conread position: 427-505
Cow position: chr11:2576299-2576377 (view UCSC Genome Browser custom track)
Alignm length: 79
Alignm identity: 74
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 429-550
Cow position: chr11:27326338-27326219 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 98
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 104, 0

Conread position: 432-550
Cow position: chr11:37547063-37547179 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 95
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 101, 0

Conread position: 439-537
Cow position: chr11:10839327-10839424 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 83
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 11, 0

Show alignments to all cow chromosomes.