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Cow genome map

           
Conread name:
           
Ss1.1-Pig4-TMW8049M02.5
        

               
Conread position:
               
42-549
               

               
Cow position:
               
chr20:1989468-1989942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
511
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
105, 13
               

               
Conread position:
               
45-550
               

               
Cow position:
               
chr20:38551659-38551170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
516
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
20, 82
               

               
Conread position:
               
47-507
               

               
Cow position:
               
chr20:15312963-15312496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
67, 53
               

               
Conread position:
               
47-535
               

               
Cow position:
               
chr20:9923853-9923406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
47-550
               

               
Cow position:
               
chr20:21715061-21714547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
524
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
17, 93
               

               
Conread position:
               
49-527
               

               
Cow position:
               
chr20:41028778-41028300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
108, 42
               

               
Conread position:
               
49-536
               

               
Cow position:
               
chr20:23870527-23871008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 59
               

               
Conread position:
               
54-478
               

               
Cow position:
               
chr20:36634092-36633679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
326, 29
               

               
Conread position:
               
55-386
               

               
Cow position:
               
chr20:40158178-40157859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
55-536
               

               
Cow position:
               
chr20:9537429-9536942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
500
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 82
               

               
Conread position:
               
57-500
               

               
Cow position:
               
chr20:20242364-20241944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
132, 15
               

               
Conread position:
               
59-537
               

               
Cow position:
               
chr20:13829544-13829071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
25, 75
               

               
Conread position:
               
60-536
               

               
Cow position:
               
chr20:8555990-8556466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
276, 38
               

               
Conread position:
               
60-552
               

               
Cow position:
               
chr20:5827217-5826728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
503
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 74
               

               
Conread position:
               
62-523
               

               
Cow position:
               
chr20:3141853-3141404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
79, 23
               

               
Conread position:
               
62-566
               

               
Cow position:
               
chr20:39518292-39517791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
518
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 125
               

               
Conread position:
               
63-365
               

               
Cow position:
               
chr20:26723387-26723695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
32, 9
               

               
Conread position:
               
65-549
               

               
Cow position:
               
chr20:12995735-12996212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 22
               

               
Conread position:
               
66-536
               

               
Cow position:
               
chr20:12441418-12441883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
17, 154
               

               
Conread position:
               
67-537
               

               
Cow position:
               
chr20:7425928-7426382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
68-538
               

               
Cow position:
               
chr20:10200623-10200148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 74
               

               
Conread position:
               
69-547
               

               
Cow position:
               
chr20:29845329-29844854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 74
               

               
Conread position:
               
69-550
               

               
Cow position:
               
chr20:13876436-13876912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
36, 67
               

               
Conread position:
               
71-455
               

               
Cow position:
               
chr20:33438714-33439087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
312, 62
               

               
Conread position:
               
71-550
               

               
Cow position:
               
chr20:7756351-7756833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
496
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 41
               

               
Conread position:
               
72-406
               

               
Cow position:
               
chr20:16941012-16941355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
33, 121
               

               
Conread position:
               
72-550
               

               
Cow position:
               
chr20:6890984-6890501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 61
               

               
Conread position:
               
75-389
               

               
Cow position:
               
chr20:10772468-10772160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
255, 8
               

               
Conread position:
               
80-533
               

               
Cow position:
               
chr20:26996795-26996341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 61
               

               
Conread position:
               
87-389
               

               
Cow position:
               
chr20:38090170-38089868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
72, 55
               

               
Conread position:
               
87-484
               

               
Cow position:
               
chr20:14433166-14433568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
103, 54
               

               
Conread position:
               
87-536
               

               
Cow position:
               
chr20:20967578-20967148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
80, 28
               

               
Conread position:
               
90-437
               

               
Cow position:
               
chr20:7737984-7738323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
289, 18
               

               
Conread position:
               
90-550
               

               
Cow position:
               
chr20:28296549-28296086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
69, 45
               

               
Conread position:
               
90-552
               

               
Cow position:
               
chr20:21345690-21345200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
496
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
51, 124
               

               
Conread position:
               
91-340
               

               
Cow position:
               
chr20:20158381-20158140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
91-514
               

               
Cow position:
               
chr20:3255283-3254878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 20
               

               
Conread position:
               
91-541
               

               
Cow position:
               
chr20:23846414-23846869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 51
               

               
Conread position:
               
96-571
               

               
Cow position:
               
chr20:25009388-25009866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
246, 45
               

               
Conread position:
               
98-298
               

               
Cow position:
               
chr20:19834587-19834784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
13, 44
               

               
Conread position:
               
100-459
               

               
Cow position:
               
chr20:2819789-2819424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
41, 87
               

               
Conread position:
               
100-550
               

               
Cow position:
               
chr20:34202883-34202443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
47, 127
               

               
Conread position:
               
101-535
               

               
Cow position:
               
chr20:8578495-8578053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 44
               

               
Conread position:
               
110-332
               

               
Cow position:
               
chr20:15766347-15766123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
30, 53
               

               
Conread position:
               
110-550
               

               
Cow position:
               
chr20:6240289-6240733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 31
               

               
Conread position:
               
110-552
               

               
Cow position:
               
chr20:12581725-12582153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
226, 31
               

               
Conread position:
               
110-552
               

               
Cow position:
               
chr20:28982929-28982492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
220, 31
               

               
Conread position:
               
121-494
               

               
Cow position:
               
chr20:2169499-2169858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
25, 12
               

               
Conread position:
               
134-493
               

               
Cow position:
               
chr20:28441537-28441177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 37
               

               
Conread position:
               
134-508
               

               
Cow position:
               
chr20:7438639-7439013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
29, 51
               

               
Conread position:
               
138-472
               

               
Cow position:
               
chr20:21761979-21761643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
152, 66
               

               
Conread position:
               
138-535
               

               
Cow position:
               
chr20:39398686-39398297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 14
               

               
Conread position:
               
139-452
               

               
Cow position:
               
chr20:39266753-39267071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
193, 137
               

               
Conread position:
               
142-537
               

               
Cow position:
               
chr20:22959150-22959536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
236, 36
               

               
Conread position:
               
145-497
               

               
Cow position:
               
chr20:5636681-5636327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 142
               

               
Conread position:
               
145-511
               

               
Cow position:
               
chr20:14100238-14100605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
170, 42
               

               
Conread position:
               
145-549
               

               
Cow position:
               
chr20:39728647-39728246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
112, 9
               

               
Conread position:
               
146-463
               

               
Cow position:
               
chr20:40692261-40691934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
39, 11
               

               
Conread position:
               
146-475
               

               
Cow position:
               
chr20:7363157-7362835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
8, 21
               

               
Conread position:
               
147-518
               

               
Cow position:
               
chr20:23064638-23065003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
192, 112
               

               
Conread position:
               
147-526
               

               
Cow position:
               
chr20:38578571-38578939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
182, 39
               

               
Conread position:
               
149-536
               

               
Cow position:
               
chr20:28067230-28067618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
19, 39
               

               
Conread position:
               
149-537
               

               
Cow position:
               
chr20:20739094-20739482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
82, 43
               

               
Conread position:
               
151-549
               

               
Cow position:
               
chr20:15565637-15566034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
20, 43
               

               
Conread position:
               
152-568
               

               
Cow position:
               
chr20:25686153-25686573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
24, 7
               

               
Conread position:
               
153-389
               

               
Cow position:
               
chr20:38514967-38514738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
153-550
               

               
Cow position:
               
chr20:6238446-6238851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
32, 64
               

               
Conread position:
               
154-384
               

               
Cow position:
               
chr20:22030506-22030280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
180, 7
               

               
Conread position:
               
154-535
               

               
Cow position:
               
chr20:17846151-17845768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
19, 132
               

               
Conread position:
               
157-550
               

               
Cow position:
               
chr20:42469946-42469562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
180, 102
               

               
Conread position:
               
159-482
               

               
Cow position:
               
chr20:9266926-9267239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
176, 26
               

               
Conread position:
               
160-547
               

               
Cow position:
               
chr20:29805477-29805862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
173, 27
               

               
Conread position:
               
161-365
               

               
Cow position:
               
chr20:21815742-21815540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
192, 32
               

               
Conread position:
               
161-551
               

               
Cow position:
               
chr20:5998481-5998871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 106
               

               
Conread position:
               
163-338
               

               
Cow position:
               
chr20:15530039-15529868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
165-473
               

               
Cow position:
               
chr20:38847051-38847368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
18, 49
               

               
Conread position:
               
165-491
               

               
Cow position:
               
chr20:41089616-41089941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
20, 28
               

               
Conread position:
               
169-477
               

               
Cow position:
               
chr20:22978502-22978185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 24
               

               
Conread position:
               
169-550
               

               
Cow position:
               
chr20:12420445-12420825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
162, 25
               

               
Conread position:
               
170-344
               

               
Cow position:
               
chr20:3148856-3148684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
68, 17
               

               
Conread position:
               
170-483
               

               
Cow position:
               
chr20:30710461-30710789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
150, 0
               

               
Conread position:
               
170-525
               

               
Cow position:
               
chr20:14980334-14980696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 17
               

               
Conread position:
               
170-534
               

               
Cow position:
               
chr20:17251894-17251518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
8, 60
               

               
Conread position:
               
170-536
               

               
Cow position:
               
chr20:4945077-4945437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
18, 56
               

               
Conread position:
               
170-536
               

               
Cow position:
               
chr20:24069978-24069619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
158, 16
               

               
Conread position:
               
170-549
               

               
Cow position:
               
chr20:11340630-11341008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 37
               

               
Conread position:
               
170-552
               

               
Cow position:
               
chr20:7806393-7806768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
25, 59
               

               
Conread position:
               
170-552
               

               
Cow position:
               
chr20:11550539-11550160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
156, 33
               

               
Conread position:
               
171-541
               

               
Cow position:
               
chr20:27407722-27408075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 21
               

               
Conread position:
               
172-440
               

               
Cow position:
               
chr20:18379550-18379282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
165, 72
               

               
Conread position:
               
172-533
               

               
Cow position:
               
chr20:9412658-9412303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 15
               

               
Conread position:
               
172-536
               

               
Cow position:
               
chr20:28605379-28605013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
167, 20
               

               
Conread position:
               
172-550
               

               
Cow position:
               
chr20:13269785-13269418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
191, 14
               

               
Conread position:
               
173-529
               

               
Cow position:
               
chr20:2204517-2204849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
213, 23
               

               
Conread position:
               
174-384
               

               
Cow position:
               
chr20:17100531-17100321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
163, 25
               

               
Conread position:
               
174-459
               

               
Cow position:
               
chr20:32463352-32463640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 104
               

               
Conread position:
               
174-496
               

               
Cow position:
               
chr20:8308186-8307861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
164, 43
               

               
Conread position:
               
174-517
               

               
Cow position:
               
chr20:16935142-16935476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 80
               

               
Conread position:
               
174-536
               

               
Cow position:
               
chr20:5950471-5950825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
14, 149
               

               
Conread position:
               
174-546
               

               
Cow position:
               
chr20:12239513-12239883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
131, 89
               

               
Conread position:
               
174-550
               

               
Cow position:
               
chr20:4621183-4621543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
23, 94
               

               
Conread position:
               
174-550
               

               
Cow position:
               
chr20:22065234-22064866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
163, 22
               

               
Conread position:
               
175-552
               

               
Cow position:
               
chr20:33532470-33532105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
202, 12
               

               
Conread position:
               
176-468
               

               
Cow position:
               
chr20:2298622-2298905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
100, 55
               

               
Conread position:
               
176-537
               

               
Cow position:
               
chr20:39743478-39743121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
153, 176
               

               
Conread position:
               
176-550
               

               
Cow position:
               
chr20:4755667-4756029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
47, 28
               

               
Conread position:
               
176-552
               

               
Cow position:
               
chr20:10818071-10818430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
9, 152
               

               
Conread position:
               
176-552
               

               
Cow position:
               
chr20:32847515-32847146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 186
               

               
Conread position:
               
176-552
               

               
Cow position:
               
chr20:35009567-35009946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
15, 265
               

               
Conread position:
               
177-550
               

               
Cow position:
               
chr20:398140-398501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
162, 32
               

               
Conread position:
               
178-491
               

               
Cow position:
               
chr20:4334365-4334667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
39, 9
               

               
Conread position:
               
178-553
               

               
Cow position:
               
chr20:580754-581130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
159, 235
               

               
Conread position:
               
179-552
               

               
Cow position:
               
chr20:10838044-10838425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
8, 125
               

               
Conread position:
               
180-405
               

               
Cow position:
               
chr20:21428321-21428101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
115, 7
               

               
Conread position:
               
180-507
               

               
Cow position:
               
chr20:15568787-15569114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
200, 7
               

               
Conread position:
               
180-509
               

               
Cow position:
               
chr20:13652203-13652522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
45, 53
               

               
Conread position:
               
180-514
               

               
Cow position:
               
chr20:3320982-3321308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
166, 7
               

               
Conread position:
               
180-535
               

               
Cow position:
               
chr20:3599236-3599581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
32, 7
               

               
Conread position:
               
180-535
               

               
Cow position:
               
chr20:10208970-10208611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 7
               

               
Conread position:
               
180-537
               

               
Cow position:
               
chr20:6096333-6096678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
199, 13
               

               
Conread position:
               
180-538
               

               
Cow position:
               
chr20:21372470-21372122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
165, 7
               

               
Conread position:
               
180-550
               

               
Cow position:
               
chr20:19751469-19751105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
200, 7
               

               
Conread position:
               
180-550
               

               
Cow position:
               
chr20:40422940-40423294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 7
               

               
Conread position:
               
180-552
               

               
Cow position:
               
chr20:38768299-38768659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
206, 91
               

               
Conread position:
               
181-505
               

               
Cow position:
               
chr20:5814727-5814409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
26, 6
               

               
Conread position:
               
181-536
               

               
Cow position:
               
chr20:36779567-36779923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
167, 11
               

               
Conread position:
               
181-549
               

               
Cow position:
               
chr20:39415911-39415543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
143, 42
               

               
Conread position:
               
182-535
               

               
Cow position:
               
chr20:31746475-31746816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
154, 10
               

               
Conread position:
               
182-538
               

               
Cow position:
               
chr20:11542121-11542477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 122
               

               
Conread position:
               
182-550
               

               
Cow position:
               
chr20:34596937-34597312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
81, 10
               

               
Conread position:
               
187-330
               

               
Cow position:
               
chr20:24097158-24097015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
187-482
               

               
Cow position:
               
chr20:1576254-1575956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
80, 107
               

               
Conread position:
               
187-514
               

               
Cow position:
               
chr20:31081195-31080874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
89, 129
               

               
Conread position:
               
187-526
               

               
Cow position:
               
chr20:42458700-42459034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
24, 6
               

               
Conread position:
               
187-537
               

               
Cow position:
               
chr20:33144396-33144748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
193, 161
               

               
Conread position:
               
187-539
               

               
Cow position:
               
chr20:34108262-34107921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
192, 127
               

               
Conread position:
               
187-550
               

               
Cow position:
               
chr20:34777336-34776982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
157, 6
               

               
Conread position:
               
187-552
               

               
Cow position:
               
chr20:18320637-18321003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 76
               

               
Conread position:
               
188-428
               

               
Cow position:
               
chr20:32866040-32866275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
138, 14
               

               
Conread position:
               
188-457
               

               
Cow position:
               
chr20:8547222-8546949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
45, 68
               

               
Conread position:
               
188-528
               

               
Cow position:
               
chr20:19237231-19236894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
176, 106
               

               
Conread position:
               
188-532
               

               
Cow position:
               
chr20:36207970-36207614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 239
               

               
Conread position:
               
188-535
               

               
Cow position:
               
chr20:40177401-40177059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
192, 161
               

               
Conread position:
               
188-536
               

               
Cow position:
               
chr20:6903471-6903136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
6, 71
               

               
Conread position:
               
188-540
               

               
Cow position:
               
chr20:31323943-31323601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
18, 29
               

               
Conread position:
               
188-548
               

               
Cow position:
               
chr20:6603197-6602835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 29
               

               
Conread position:
               
188-549
               

               
Cow position:
               
chr20:5702880-5702542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
139, 0
               

               
Conread position:
               
188-550
               

               
Cow position:
               
chr20:1139612-1139977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
48, 35
               

               
Conread position:
               
188-550
               

               
Cow position:
               
chr20:13752381-13752037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 141
               

               
Conread position:
               
188-552
               

               
Cow position:
               
chr20:14879945-14879580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 39
               

               
Conread position:
               
188-552
               

               
Cow position:
               
chr20:40511600-40511963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
143, 124
               

               
Conread position:
               
189-533
               

               
Cow position:
               
chr20:9433742-9433409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
136, 157
               

               
Conread position:
               
192-389
               

               
Cow position:
               
chr20:4786866-4787057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
137, 42
               

               
Conread position:
               
192-480
               

               
Cow position:
               
chr20:22485011-22484724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
194, 93
               

               
Conread position:
               
192-497
               

               
Cow position:
               
chr20:13025458-13025761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
88, 190
               

               
Conread position:
               
193-537
               

               
Cow position:
               
chr20:14759514-14759857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
187, 134
               

               
Conread position:
               
196-437
               

               
Cow position:
               
chr20:35710324-35710075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
31, 177
               

               
Conread position:
               
196-535
               

               
Cow position:
               
chr20:42309820-42310153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
85, 13
               

               
Conread position:
               
196-536
               

               
Cow position:
               
chr20:14620153-14620465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
34, 139
               

               
Conread position:
               
196-536
               

               
Cow position:
               
chr20:35906902-35907239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
71, 139
               

               
Conread position:
               
196-550
               

               
Cow position:
               
chr20:19363215-19363566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
135, 23
               

               
Conread position:
               
196-551
               

               
Cow position:
               
chr20:22235460-22235109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 135
               

               
Conread position:
               
196-552
               

               
Cow position:
               
chr20:23792752-23792395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
190, 120
               

               
Conread position:
               
197-549
               

               
Cow position:
               
chr20:33178371-33178729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
13, 29
               

               
Conread position:
               
199-552
               

               
Cow position:
               
chr20:20203363-20203010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
134, 263
               

               
Conread position:
               
200-550
               

               
Cow position:
               
chr20:7441992-7442328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
186, 63
               

               
Conread position:
               
201-550
               

               
Cow position:
               
chr20:31464234-31464585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
5, 16
               

               
Conread position:
               
202-535
               

               
Cow position:
               
chr20:26057928-26058261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
203-371
               

               
Cow position:
               
chr20:6358761-6358588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
123, 0
               

               
Conread position:
               
203-406
               

               
Cow position:
               
chr20:30888176-30887968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
54, 138
               

               
Conread position:
               
203-436
               

               
Cow position:
               
chr20:22265111-22265341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
177, 92
               

               
Conread position:
               
203-470
               

               
Cow position:
               
chr20:25161984-25162258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
203-512
               

               
Cow position:
               
chr20:7211175-7210867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
183, 20
               

               
Conread position:
               
203-550
               

               
Cow position:
               
chr20:15078493-15078842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
34, 13
               

               
Conread position:
               
203-552
               

               
Cow position:
               
chr20:14807028-14806680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
135, 252
               

               
Conread position:
               
203-552
               

               
Cow position:
               
chr20:33363659-33363314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 235
               

               
Conread position:
               
204-503
               

               
Cow position:
               
chr20:22346025-22345723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
26, 12
               

               
Conread position:
               
204-526
               

               
Cow position:
               
chr20:11453220-11453537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
58, 12
               

               
Conread position:
               
204-534
               

               
Cow position:
               
chr20:38818140-38817820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
129, 56
               

               
Conread position:
               
204-537
               

               
Cow position:
               
chr20:20778418-20778746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
26, 12
               

               
Conread position:
               
204-550
               

               
Cow position:
               
chr20:15235892-15235560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
175, 69
               

               
Conread position:
               
204-555
               

               
Cow position:
               
chr20:38872862-38873221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
86, 12
               

               
Conread position:
               
205-401
               

               
Cow position:
               
chr20:22000141-21999943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
71, 61
               

               
Conread position:
               
209-361
               

               
Cow position:
               
chr20:1009571-1009722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
148, 0
               

               
Conread position:
               
212-538
               

               
Cow position:
               
chr20:32083950-32084278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 55
               

               
Conread position:
               
212-552
               

               
Cow position:
               
chr20:6257928-6258269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 12
               

               
Conread position:
               
213-440
               

               
Cow position:
               
chr20:23286204-23286423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
215-551
               

               
Cow position:
               
chr20:15543768-15544103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
8, 21
               

               
Conread position:
               
215-552
               

               
Cow position:
               
chr20:6424096-6423758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
158, 68
               

               
Conread position:
               
215-567
               

               
Cow position:
               
chr20:27298610-27298961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
8, 21
               

               
Conread position:
               
216-405
               

               
Cow position:
               
chr20:23506342-23506534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
163, 107
               

               
Conread position:
               
216-406
               

               
Cow position:
               
chr20:7624120-7624312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
72, 60
               

               
Conread position:
               
216-471
               

               
Cow position:
               
chr20:28955573-28955830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
129, 111
               

               
Conread position:
               
216-527
               

               
Cow position:
               
chr20:40782089-40781785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
162, 107
               

               
Conread position:
               
216-535
               

               
Cow position:
               
chr20:21929033-21928714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
162, 114
               

               
Conread position:
               
216-536
               

               
Cow position:
               
chr20:20984120-20983815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
162, 102
               

               
Conread position:
               
216-552
               

               
Cow position:
               
chr20:26077210-26076879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
111, 95
               

               
Conread position:
               
217-503
               

               
Cow position:
               
chr20:14012096-14011811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
50, 85
               

               
Conread position:
               
217-526
               

               
Cow position:
               
chr20:37165837-37165544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
217-538
               

               
Cow position:
               
chr20:3606834-3607148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 49
               

               
Conread position:
               
218-530
               

               
Cow position:
               
chr20:19459539-19459833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
117, 171
               

               
Conread position:
               
221-550
               

               
Cow position:
               
chr20:15548773-15549101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 243
               

               
Conread position:
               
222-536
               

               
Cow position:
               
chr20:10859232-10859557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
114, 13
               

               
Conread position:
               
226-536
               

               
Cow position:
               
chr20:11482016-11482331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
39, 32
               

               
Conread position:
               
226-550
               

               
Cow position:
               
chr20:35146139-35145803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
33, 43
               

               
Conread position:
               
228-550
               

               
Cow position:
               
chr20:34001273-34001600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
101, 245
               

               
Conread position:
               
231-535
               

               
Cow position:
               
chr20:35797722-35797414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 32
               

               
Conread position:
               
231-540
               

               
Cow position:
               
chr20:21019679-21019369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
38, 22
               

               
Conread position:
               
231-544
               

               
Cow position:
               
chr20:35365159-35364851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
21, 26
               

               
Conread position:
               
231-550
               

               
Cow position:
               
chr20:1640341-1640651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
87, 11
               

               
Conread position:
               
231-552
               

               
Cow position:
               
chr20:4206085-4205757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 311
               

               
Conread position:
               
232-503
               

               
Cow position:
               
chr20:34221591-34221314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
138, 106
               

               
Conread position:
               
232-522
               

               
Cow position:
               
chr20:13821468-13821764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
102, 5
               

               
Conread position:
               
232-550
               

               
Cow position:
               
chr20:31927350-31927662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
67, 78
               

               
Conread position:
               
234-479
               

               
Cow position:
               
chr20:8262026-8261772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
59, 141
               

               
Conread position:
               
234-536
               

               
Cow position:
               
chr20:8702807-8703099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 50
               

               
Conread position:
               
234-550
               

               
Cow position:
               
chr20:16715502-16715196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
48, 107
               

               
Conread position:
               
234-550
               

               
Cow position:
               
chr20:22313050-22313363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
105, 124
               

               
Conread position:
               
234-550
               

               
Cow position:
               
chr20:28559586-28559904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
48, 89
               

               
Conread position:
               
235-437
               

               
Cow position:
               
chr20:23103332-23103123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
235-478
               

               
Cow position:
               
chr20:4332239-4332004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
172, 83
               

               
Conread position:
               
235-482
               

               
Cow position:
               
chr20:40446438-40446191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
92, 49
               

               
Conread position:
               
235-494
               

               
Cow position:
               
chr20:36010905-36010639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
43, 69
               

               
Conread position:
               
235-503
               

               
Cow position:
               
chr20:28058476-28058746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
104, 94
               

               
Conread position:
               
235-505
               

               
Cow position:
               
chr20:42197422-42197166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
235-535
               

               
Cow position:
               
chr20:16556653-16556357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
108, 24
               

               
Conread position:
               
235-535
               

               
Cow position:
               
chr20:35176668-35176961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
100, 124
               

               
Conread position:
               
235-536
               

               
Cow position:
               
chr20:6054400-6054705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
93, 242
               

               
Conread position:
               
235-536
               

               
Cow position:
               
chr20:7659104-7659406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
43, 212
               

               
Conread position:
               
235-537
               

               
Cow position:
               
chr20:26825519-26825824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
51, 104
               

               
Conread position:
               
235-550
               

               
Cow position:
               
chr20:5539499-5539182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
108, 67
               

               
Conread position:
               
235-550
               

               
Cow position:
               
chr20:13023393-13023682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
133, 24
               

               
Conread position:
               
235-550
               

               
Cow position:
               
chr20:14572254-14572560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
52, 95
               

               
Conread position:
               
235-550
               

               
Cow position:
               
chr20:14650332-14650645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
44, 84
               

               
Conread position:
               
235-550
               

               
Cow position:
               
chr20:17656887-17657203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
44, 58
               

               
Conread position:
               
235-550
               

               
Cow position:
               
chr20:17888975-17889292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
44, 68
               

               
Conread position:
               
235-550
               

               
Cow position:
               
chr20:19328497-19328196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
145, 66
               

               
Conread position:
               
235-550
               

               
Cow position:
               
chr20:22683347-22683660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
44, 88
               

               
Conread position:
               
235-550
               

               
Cow position:
               
chr20:26748939-26748626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
63, 52
               

               
Conread position:
               
235-550
               

               
Cow position:
               
chr20:27642249-27641932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
96, 67
               

               
Conread position:
               
235-550
               

               
Cow position:
               
chr20:31740110-31740419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 176
               

               
Conread position:
               
235-550
               

               
Cow position:
               
chr20:34251563-34251882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
47, 125
               

               
Conread position:
               
235-550
               

               
Cow position:
               
chr20:39325500-39325181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
52, 69
               

               
Conread position:
               
235-550
               

               
Cow position:
               
chr20:39675297-39675597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
174, 48
               

               
Conread position:
               
235-552
               

               
Cow position:
               
chr20:9014238-9014554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
160, 33
               

               
Conread position:
               
235-552
               

               
Cow position:
               
chr20:11176138-11176453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
96, 138
               

               
Conread position:
               
235-553
               

               
Cow position:
               
chr20:28440194-28439873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
153, 94
               

               
Conread position:
               
235-569
               

               
Cow position:
               
chr20:8429856-8429516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
132, 98
               

               
Conread position:
               
236-507
               

               
Cow position:
               
chr20:271315-271586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
92, 212
               

               
Conread position:
               
236-518
               

               
Cow position:
               
chr20:38123996-38123710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
131, 77
               

               
Conread position:
               
236-537
               

               
Cow position:
               
chr20:34097845-34098151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
46, 244
               

               
Conread position:
               
236-548
               

               
Cow position:
               
chr20:11741197-11741505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
150, 76
               

               
Conread position:
               
236-550
               

               
Cow position:
               
chr20:35999801-35999484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
56, 111
               

               
Conread position:
               
237-536
               

               
Cow position:
               
chr20:33435048-33435361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
44, 219
               

               
Conread position:
               
237-550
               

               
Cow position:
               
chr20:17670291-17669978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
30, 21
               

               
Conread position:
               
238-537
               

               
Cow position:
               
chr20:35958754-35958452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
106, 230
               

               
Conread position:
               
238-550
               

               
Cow position:
               
chr20:6501900-6501595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
145, 81
               

               
Conread position:
               
239-547
               

               
Cow position:
               
chr20:774121-774431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
25, 17
               

               
Conread position:
               
239-550
               

               
Cow position:
               
chr20:18551467-18551159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
56, 28
               

               
Conread position:
               
240-453
               

               
Cow position:
               
chr20:24000693-24000911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
139, 210
               

               
Conread position:
               
241-549
               

               
Cow position:
               
chr20:40257073-40256767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
106, 86
               

               
Conread position:
               
241-552
               

               
Cow position:
               
chr20:23505931-23505623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 191
               

               
Conread position:
               
242-537
               

               
Cow position:
               
chr20:8606830-8607113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
87, 18
               

               
Conread position:
               
242-537
               

               
Cow position:
               
chr20:20471887-20471598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
93, 76
               

               
Conread position:
               
243-552
               

               
Cow position:
               
chr20:39019797-39019490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 184
               

               
Conread position:
               
244-550
               

               
Cow position:
               
chr20:22445551-22445841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
136, 17
               

               
Conread position:
               
246-411
               

               
Cow position:
               
chr20:21204456-21204289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
132, 98
               

               
Conread position:
               
246-568
               

               
Cow position:
               
chr20:36331324-36331651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 13
               

               
Conread position:
               
247-453
               

               
Cow position:
               
chr20:34901669-34901459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
86, 203
               

               
Conread position:
               
247-536
               

               
Cow position:
               
chr20:10884260-10884558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
106, 85
               

               
Conread position:
               
250-500
               

               
Cow position:
               
chr20:10788796-10789022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
256-550
               

               
Cow position:
               
chr20:41451722-41452010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
73, 27
               

               
Conread position:
               
260-558
               

               
Cow position:
               
chr20:24868947-24869240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
68, 58
               

               
Conread position:
               
262-550
               

               
Cow position:
               
chr20:7132434-7132144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
7, 77
               

               
Conread position:
               
264-536
               

               
Cow position:
               
chr20:19146957-19146678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
264-550
               

               
Cow position:
               
chr20:13967176-13967462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
71, 202
               

               
Conread position:
               
264-552
               

               
Cow position:
               
chr20:22704375-22704082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 276
               

               
Conread position:
               
265-516
               

               
Cow position:
               
chr20:24727442-24727201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
145, 63
               

               
Conread position:
               
265-550
               

               
Cow position:
               
chr20:754764-754478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
122, 64
               

               
Conread position:
               
265-550
               

               
Cow position:
               
chr20:22059853-22060141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
122, 64
               

               
Conread position:
               
265-550
               

               
Cow position:
               
chr20:24104388-24104675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
122, 64
               

               
Conread position:
               
268-526
               

               
Cow position:
               
chr20:11864057-11864318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
90, 59
               

               
Conread position:
               
270-550
               

               
Cow position:
               
chr20:38350488-38350770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
117, 59
               

               
Conread position:
               
273-503
               

               
Cow position:
               
chr20:31487590-31487819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
144, 56
               

               
Conread position:
               
273-550
               

               
Cow position:
               
chr20:17864440-17864161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
113, 56
               

               
Conread position:
               
275-550
               

               
Cow position:
               
chr20:24521818-24521547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
105, 62
               

               
Conread position:
               
278-552
               

               
Cow position:
               
chr20:20312681-20312943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
100, 51
               

               
Conread position:
               
281-526
               

               
Cow position:
               
chr20:7550301-7550059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
65, 44
               

               
Conread position:
               
281-552
               

               
Cow position:
               
chr20:10033856-10034135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
29, 260
               

               
Conread position:
               
282-550
               

               
Cow position:
               
chr20:18618698-18618435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
47, 36
               

               
Conread position:
               
283-522
               

               
Cow position:
               
chr20:34240599-34240347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
283-550
               

               
Cow position:
               
chr20:3781362-3781631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
52, 194
               

               
Conread position:
               
283-552
               

               
Cow position:
               
chr20:9379467-9379203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
103, 46
               

               
Conread position:
               
284-538
               

               
Cow position:
               
chr20:38414926-38415165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
284-539
               

               
Cow position:
               
chr20:18423761-18423526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
284-550
               

               
Cow position:
               
chr20:15760889-15761152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
104, 49
               

               
Conread position:
               
284-551
               

               
Cow position:
               
chr20:4894835-4895098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
35, 13
               

               
Conread position:
               
284-552
               

               
Cow position:
               
chr20:7182615-7182882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
96, 61
               

               
Conread position:
               
284-552
               

               
Cow position:
               
chr20:11923186-11923446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
90, 13
               

               
Conread position:
               
285-456
               

               
Cow position:
               
chr20:38430947-38431111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
55, 81
               

               
Conread position:
               
285-550
               

               
Cow position:
               
chr20:9489330-9489596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
13, 18
               

               
Conread position:
               
285-552
               

               
Cow position:
               
chr20:4204351-4204086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
106, 88
               

               
Conread position:
               
286-550
               

               
Cow position:
               
chr20:7642223-7641957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
99, 43
               

               
Conread position:
               
286-550
               

               
Cow position:
               
chr20:9994584-9994318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
51, 60
               

               
Conread position:
               
286-550
               

               
Cow position:
               
chr20:16188782-16189048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
99, 43
               

               
Conread position:
               
286-550
               

               
Cow position:
               
chr20:18507308-18507044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
101, 43
               

               
Conread position:
               
286-550
               

               
Cow position:
               
chr20:23354756-23355022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
99, 43
               

               
Conread position:
               
286-550
               

               
Cow position:
               
chr20:26598136-26597870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
99, 43
               

               
Conread position:
               
286-550
               

               
Cow position:
               
chr20:35242198-35241932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
99, 43
               

               
Conread position:
               
286-550
               

               
Cow position:
               
chr20:39269437-39269703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
99, 43
               

               
Conread position:
               
286-554
               

               
Cow position:
               
chr20:40161070-40161336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
100, 52
               

               
Conread position:
               
287-513
               

               
Cow position:
               
chr20:28832028-28831794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
287-536
               

               
Cow position:
               
chr20:14735726-14735484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
93, 40
               

               
Conread position:
               
287-536
               

               
Cow position:
               
chr20:15593355-15593104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
49, 181
               

               
Conread position:
               
287-550
               

               
Cow position:
               
chr20:9473555-9473818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
45, 178
               

               
Conread position:
               
287-550
               

               
Cow position:
               
chr20:17904216-17903952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
99, 42
               

               
Conread position:
               
287-550
               

               
Cow position:
               
chr20:18100465-18100215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
116, 53
               

               
Conread position:
               
287-550
               

               
Cow position:
               
chr20:23834185-23833922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
51, 127
               

               
Conread position:
               
287-552
               

               
Cow position:
               
chr20:30817595-30817331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
46, 180
               

               
Conread position:
               
288-539
               

               
Cow position:
               
chr20:27843709-27843456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
49, 104
               

               
Conread position:
               
288-550
               

               
Cow position:
               
chr20:3035162-3034890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
41, 246
               

               
Conread position:
               
288-550
               

               
Cow position:
               
chr20:14403679-14403424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
45, 35
               

               
Conread position:
               
288-552
               

               
Cow position:
               
chr20:19266214-19265951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
39, 132
               

               
Conread position:
               
288-558
               

               
Cow position:
               
chr20:15147959-15148225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
107, 35
               

               
Conread position:
               
289-530
               

               
Cow position:
               
chr20:24392034-24391794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
91, 44
               

               
Conread position:
               
293-527
               

               
Cow position:
               
chr20:23952674-23952434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
9, 40
               

               
Conread position:
               
295-536
               

               
Cow position:
               
chr20:27340112-27339874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
91, 165
               

               
Conread position:
               
295-549
               

               
Cow position:
               
chr20:15069189-15068941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
116, 43
               

               
Conread position:
               
301-550
               

               
Cow position:
               
chr20:6848674-6848418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
32, 171
               

               
Conread position:
               
302-484
               

               
Cow position:
               
chr20:39247955-39247769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
23, 121
               

               
Conread position:
               
302-550
               

               
Cow position:
               
chr20:10178056-10178315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
80, 234
               

               
Conread position:
               
302-550
               

               
Cow position:
               
chr20:14756025-14756271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
43, 27
               

               
Conread position:
               
305-498
               

               
Cow position:
               
chr20:41309579-41309382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
26, 107
               

               
Conread position:
               
305-536
               

               
Cow position:
               
chr20:39137164-39137400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
81, 68
               

               
Conread position:
               
305-537
               

               
Cow position:
               
chr20:32068812-32069050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
305-548
               

               
Cow position:
               
chr20:5269031-5269270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
40, 83
               

               
Conread position:
               
305-550
               

               
Cow position:
               
chr20:20202032-20201788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
35, 164
               

               
Conread position:
               
305-558
               

               
Cow position:
               
chr20:9988619-9988375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
90, 22
               

               
Conread position:
               
306-537
               

               
Cow position:
               
chr20:26469024-26469258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
40, 162
               

               
Conread position:
               
306-550
               

               
Cow position:
               
chr20:34276345-34276591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
79, 23
               

               
Conread position:
               
307-508
               

               
Cow position:
               
chr20:31077590-31077385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
57, 26
               

               
Conread position:
               
308-533
               

               
Cow position:
               
chr20:37200398-37200164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
31, 182
               

               
Conread position:
               
309-552
               

               
Cow position:
               
chr20:8910955-8910718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
25, 66
               

               
Conread position:
               
311-536
               

               
Cow position:
               
chr20:26680157-26679931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
69, 31
               

               
Conread position:
               
311-550
               

               
Cow position:
               
chr20:15777118-15777359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
34, 18
               

               
Conread position:
               
311-550
               

               
Cow position:
               
chr20:19846047-19845799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
36, 26
               

               
Conread position:
               
311-552
               

               
Cow position:
               
chr20:21016517-21016271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
71, 16
               

               
Conread position:
               
312-535
               

               
Cow position:
               
chr20:5104410-5104626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
74, 9
               

               
Conread position:
               
312-553
               

               
Cow position:
               
chr20:2913995-2913755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
29, 17
               

               
Conread position:
               
312-572
               

               
Cow position:
               
chr20:29370149-29370410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
76, 16
               

               
Conread position:
               
313-559
               

               
Cow position:
               
chr20:19410330-19410584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
19, 120
               

               
Conread position:
               
315-552
               

               
Cow position:
               
chr20:15576857-15577097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
22, 148
               

               
Conread position:
               
317-537
               

               
Cow position:
               
chr20:32577894-32578112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
38, 72
               

               
Conread position:
               
317-549
               

               
Cow position:
               
chr20:10235884-10235649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
24, 41
               

               
Conread position:
               
317-550
               

               
Cow position:
               
chr20:15582012-15582240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
78, 12
               

               
Conread position:
               
317-563
               

               
Cow position:
               
chr20:12041123-12041365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
20, 10
               

               
Conread position:
               
318-550
               

               
Cow position:
               
chr20:33177216-33176978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
62, 132
               

               
Conread position:
               
319-503
               

               
Cow position:
               
chr20:18837130-18837320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
320-552
               

               
Cow position:
               
chr20:20557628-20557860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
50, 13
               

               
Conread position:
               
321-550
               

               
Cow position:
               
chr20:10469089-10468867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
16, 6
               

               
Conread position:
               
321-552
               

               
Cow position:
               
chr20:382090-382333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
59, 91
               

               
Conread position:
               
324-526
               

               
Cow position:
               
chr20:38027992-38028189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
324-547
               

               
Cow position:
               
chr20:15073815-15074033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
62, 138
               

               
Conread position:
               
324-550
               

               
Cow position:
               
chr20:22920147-22920364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
13, 63
               

               
Conread position:
               
327-550
               

               
Cow position:
               
chr20:19313045-19313270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
13, 93
               

               
Conread position:
               
327-552
               

               
Cow position:
               
chr20:14831597-14831819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
59, 46
               

               
Conread position:
               
327-592
               

               
Cow position:
               
chr20:14471527-14471794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
59, 172
               

               
Conread position:
               
329-536
               

               
Cow position:
               
chr20:14740082-14740290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
46, 108
               

               
Conread position:
               
329-537
               

               
Cow position:
               
chr20:35897535-35897325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
8, 139
               

               
Conread position:
               
329-550
               

               
Cow position:
               
chr20:32636552-32636769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
9, 130
               

               
Conread position:
               
329-552
               

               
Cow position:
               
chr20:220637-220412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
51, 203
               

               
Conread position:
               
332-548
               

               
Cow position:
               
chr20:22007512-22007302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
48, 15
               

               
Conread position:
               
332-550
               

               
Cow position:
               
chr20:8112832-8112610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
24, 96
               

               
Conread position:
               
333-550
               

               
Cow position:
               
chr20:33169861-33170078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
53, 130
               

               
Conread position:
               
334-548
               

               
Cow position:
               
chr20:20350980-20351191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
44, 11
               

               
Conread position:
               
335-550
               

               
Cow position:
               
chr20:11614034-11614247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
68, 11
               

               
Conread position:
               
335-550
               

               
Cow position:
               
chr20:38486538-38486752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
60, 47
               

               
Conread position:
               
336-536
               

               
Cow position:
               
chr20:19238420-19238624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
44, 85
               

               
Conread position:
               
337-535
               

               
Cow position:
               
chr20:13994820-13994618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
43, 22
               

               
Conread position:
               
337-537
               

               
Cow position:
               
chr20:23679140-23679339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
49, 110
               

               
Conread position:
               
337-545
               

               
Cow position:
               
chr20:8020905-8020693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
338-550
               

               
Cow position:
               
chr20:27314682-27314478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
57, 25
               

               
Conread position:
               
339-530
               

               
Cow position:
               
chr20:17733769-17733964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
41, 107
               

               
Conread position:
               
344-539
               

               
Cow position:
               
chr20:7539224-7539422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
347-550
               

               
Cow position:
               
chr20:16291469-16291267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
27, 51
               

               
Conread position:
               
348-505
               

               
Cow position:
               
chr20:12048390-12048235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
69, 117
               

               
Conread position:
               
348-534
               

               
Cow position:
               
chr20:42278702-42278517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
38, 50
               

               
Conread position:
               
353-550
               

               
Cow position:
               
chr20:8101056-8101251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
57, 14
               

               
Conread position:
               
355-543
               

               
Cow position:
               
chr20:11043513-11043694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
25, 103
               

               
Conread position:
               
362-550
               

               
Cow position:
               
chr20:18399738-18399557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
48, 15
               

               
Conread position:
               
367-552
               

               
Cow position:
               
chr20:10913355-10913540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
23, 19
               

               
Conread position:
               
368-550
               

               
Cow position:
               
chr20:22029912-22029734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
85, 8
               

               
Conread position:
               
371-539
               

               
Cow position:
               
chr20:31487194-31487361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
154, 30
               

               
Conread position:
               
371-552
               

               
Cow position:
               
chr20:3502265-3502088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
14, 27
               

               
Conread position:
               
374-576
               

               
Cow position:
               
chr20:36997686-36997486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
21, 12
               

               
Conread position:
               
377-520
               

               
Cow position:
               
chr20:41119875-41119739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
377-548
               

               
Cow position:
               
chr20:4781529-4781359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
156, 0
               

               
Conread position:
               
377-554
               

               
Cow position:
               
chr20:35760633-35760463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
378-484
               

               
Cow position:
               
chr20:9730048-9729945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
107
               

               
Alignm identity:
               
89
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
378-540
               

               
Cow position:
               
chr20:35604082-35604246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
19, 11
               

               
Conread position:
               
378-549
               

               
Cow position:
               
chr20:24902500-24902675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
133, 38
               

               
Conread position:
               
378-550
               

               
Cow position:
               
chr20:4950453-4950624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
32, 156
               

               
Conread position:
               
380-551
               

               
Cow position:
               
chr20:5116341-5116509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
153, 0
               

               
Conread position:
               
384-547
               

               
Cow position:
               
chr20:34089859-34089695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
6, 150
               

               
Conread position:
               
386-550
               

               
Cow position:
               
chr20:17584372-17584211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
21, 113
               

               
Conread position:
               
391-526
               

               
Cow position:
               
chr20:39212754-39212623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
13, 63
               

               
Conread position:
               
391-536
               

               
Cow position:
               
chr20:23850233-23850092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
30, 37
               

               
Conread position:
               
393-537
               

               
Cow position:
               
chr20:12840003-12839862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
397-553
               

               
Cow position:
               
chr20:34835924-34836077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
144, 112
               

               
Conread position:
               
398-535
               

               
Cow position:
               
chr20:14718799-14718932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
398-577
               

               
Cow position:
               
chr20:41957725-41957546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
171, 86
               

               
Conread position:
               
400-535
               

               
Cow position:
               
chr20:4892961-4893088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
401-549
               

               
Cow position:
               
chr20:16941381-16941526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
40, 13
               

               
Conread position:
               
405-533
               

               
Cow position:
               
chr20:19351830-19351957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
405-552
               

               
Cow position:
               
chr20:32866407-32866552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
128, 0
               

               
Conread position:
               
415-550
               

               
Cow position:
               
chr20:13267504-13267637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
118, 0
               

               
Conread position:
               
416-531
               

               
Cow position:
               
chr20:19369243-19369364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
416-534
               

               
Cow position:
               
chr20:16788362-16788245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
416-537
               

               
Cow position:
               
chr20:5729551-5729669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
416-540
               

               
Cow position:
               
chr20:12064555-12064434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
416-545
               

               
Cow position:
               
chr20:31148011-31147893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
416-549
               

               
Cow position:
               
chr20:35113459-35113328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
117, 0
               

               
Conread position:
               
418-537
               

               
Cow position:
               
chr20:41470091-41469971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
121
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
418-552
               

               
Cow position:
               
chr20:16956897-16957030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
48, 116
               

               
Conread position:
               
418-552
               

               
Cow position:
               
chr20:27565945-27565815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
419-536
               

               
Cow position:
               
chr20:41704079-41703962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
118
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
425-550
               

               
Cow position:
               
chr20:24363557-24363434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
108, 0
               

               
Conread position:
               
429-535
               

               
Cow position:
               
chr20:32830018-32829911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
108
               

               
Alignm identity:
               
90
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
429-552
               

               
Cow position:
               
chr20:8620594-8620714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
429-567
               

               
Cow position:
               
chr20:11157091-11157230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
105, 0
               

               
Conread position:
               
448-543
               

               
Cow position:
               
chr20:36040106-36040011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
96
               

               
Alignm identity:
               
82
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               
Show alignments to all cow chromosomes.